Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G183500.1 | Wheat | mitochondrion | 88.41 | 85.92 |
| TraesCS7B01G086900.1 | Wheat | mitochondrion, nucleus | 86.96 | 85.71 |
| Os06t0223700-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 67.39 | 65.49 |
| OQU76080 | Sorghum | cytosol | 56.52 | 58.21 |
| CDX79242 | Canola | mitochondrion | 7.25 | 55.56 |
| Zm00001d044849_P001 | Maize | plastid | 55.8 | 49.04 |
| GSMUA_Achr9P13000_001 | Banana | mitochondrion, nucleus | 47.1 | 44.52 |
| GSMUA_Achr3P04440_001 | Banana | mitochondrion | 42.03 | 44.27 |
| GSMUA_Achr10P... | Banana | nucleus | 47.1 | 44.22 |
| KRH18875 | Soybean | mitochondrion | 42.75 | 41.26 |
| KRH16681 | Soybean | mitochondrion | 44.2 | 40.4 |
| GSMUA_Achr7P17710_001 | Banana | mitochondrion | 44.2 | 40.13 |
| GSMUA_Achr6P02010_001 | Banana | mitochondrion, nucleus | 44.93 | 40.0 |
| KRH62389 | Soybean | mitochondrion | 36.96 | 37.5 |
| GSMUA_Achr5P24390_001 | Banana | cytosol | 34.06 | 37.3 |
| CDX79243 | Canola | cytosol, plastid | 29.71 | 36.61 |
| PGSC0003DMT400024491 | Potato | nucleus | 43.48 | 36.36 |
| Solyc04g072780.2.1 | Tomato | nucleus | 44.2 | 36.31 |
| TraesCS5A01G191000.1 | Wheat | cytosol | 43.48 | 36.14 |
| GSMUA_Achr4P01820_001 | Banana | mitochondrion | 40.58 | 34.78 |
| GSMUA_Achr8P18580_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 39.86 | 34.59 |
| CDY21344 | Canola | nucleus | 39.13 | 34.39 |
| Bra031369.1-P | Field mustard | nucleus | 39.13 | 34.39 |
| TraesCS6A01G302700.1 | Wheat | mitochondrion | 39.13 | 33.75 |
| Bra012309.1-P | Field mustard | nucleus | 38.41 | 33.54 |
| AT1G78020.1 | Thale cress | mitochondrion | 39.13 | 33.33 |
| Solyc12g056950.1.1 | Tomato | cytosol, mitochondrion | 33.33 | 33.33 |
| CDY38242 | Canola | mitochondrion, nucleus | 37.68 | 33.12 |
| CDY01294 | Canola | nucleus | 37.68 | 32.91 |
| PGSC0003DMT400022055 | Potato | mitochondrion | 32.61 | 32.61 |
| CDX87485 | Canola | cytosol, mitochondrion | 36.23 | 32.47 |
| Bra015639.1-P | Field mustard | cytosol, mitochondrion, plastid | 36.23 | 32.47 |
| CDX88407 | Canola | cytosol, mitochondrion | 36.23 | 32.47 |
| KRH53114 | Soybean | nucleus | 36.23 | 32.47 |
| GSMUA_Achr6P04060_001 | Banana | mitochondrion, nucleus | 36.23 | 32.26 |
| AT1G22160.1 | Thale cress | mitochondrion, nucleus | 34.06 | 31.97 |
| CDY00425 | Canola | nucleus | 36.23 | 31.65 |
| CDX68033 | Canola | cytosol, mitochondrion | 34.06 | 30.92 |
| CDY14641 | Canola | mitochondrion | 36.23 | 30.67 |
| CDY26845 | Canola | mitochondrion | 36.23 | 30.67 |
| Bra008341.1-P | Field mustard | mitochondrion | 36.23 | 30.67 |
| Bra003661.1-P | Field mustard | cytosol, mitochondrion | 33.33 | 30.26 |
| VIT_18s0001g05020.t01 | Wine grape | extracellular, vacuole | 39.86 | 26.44 |
| TraesCS6A01G295800.1 | Wheat | mitochondrion | 26.09 | 25.53 |
| TraesCS6A01G295900.1 | Wheat | mitochondrion | 26.09 | 25.53 |
| TraesCS6A01G295600.1 | Wheat | mitochondrion | 25.36 | 23.65 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G182100.1 | EnsemblPlantsGene:TraesCS7A01G182100 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF4 |
| PFAM:PF04570 | PFscan:PS51795 | SEG:seg | MapMan:27.3.3 | : | : |
Description
No Description!
Coordinates
chr7A:-:136755813..136756892
Molecular Weight (calculated)
14641.2 Da
IEP (calculated)
8.880
GRAVY (calculated)
-0.478
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTLGKRHRN SSSMRRTTSM SGFAVPPEEE AAGRQPTRAA RGASAAPAQT EWGAAFQRRH SGDFNAAVET AAFLKACGLC CRRLGPGRDT FIYMGEVAFC
101: SLECRQQQMN LDELKDKKCF PATGSGGSDG TSGTVAAA
101: SLECRQQQMN LDELKDKKCF PATGSGGSDG TSGTVAAA
001: MLLGKRQRPP IKRTTSLSEI KFDLNQPSEQ EPSDHQIQLV NVDEHRQVHQ RLLDQRLLAM VSPRGTQRRH SSDYSEDFLR SCSLCKRLLV HGRDIYMYRG
101: DRAFCSLECR QQQITVDERK EKKKGSVRST IVVATGTTTG ERVSAAV
101: DRAFCSLECR QQQITVDERK EKKKGSVRST IVVATGTTTG ERVSAAV
Arabidopsis Description
Senescence-associated family protein (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8VY80]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.