Factsheet for GSMUA_Achr10P24480_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G22160.1	GSMUA_Achr10P...	AT3G29160.1	21798944
AT1G22160.1	GSMUA_AchrUn_...	AT3G29160.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79242	Canola	mitochondrion	8.16	66.67
GSMUA_Achr7P17710_001	Banana	mitochondrion	61.9	59.87
GSMUA_Achr3P04440_001	Banana	mitochondrion	49.66	55.73
GSMUA_Achr9P13000_001	Banana	mitochondrion, nucleus	48.98	49.32
GSMUA_Achr5P24390_001	Banana	cytosol	42.18	49.21
TraesCS7D01G183500.1	Wheat	mitochondrion	45.58	47.18
TraesCS7B01G086900.1	Wheat	mitochondrion, nucleus	44.9	47.14
TraesCS7A01G182100.1	Wheat	mitochondrion	44.22	47.1
GSMUA_Achr6P02010_001	Banana	mitochondrion, nucleus	49.66	47.1
OQU76080	Sorghum	cytosol	41.5	45.52
Os06t0223700-01	Rice	cytosol, mitochondrion, nucleus, plastid	43.54	45.07
GSMUA_Achr4P01820_001	Banana	mitochondrion	48.98	44.72
GSMUA_Achr6P04060_001	Banana	mitochondrion, nucleus	45.58	43.23
CDX79243	Canola	cytosol, plastid	32.65	42.86
KRH18875	Soybean	mitochondrion	41.5	42.66
KRH16681	Soybean	mitochondrion	42.18	41.06
AT1G22160.1	Thale cress	mitochondrion, nucleus	40.82	40.82
PGSC0003DMT400022055	Potato	mitochondrion	38.1	40.58
KRH62389	Soybean	mitochondrion	37.41	40.44
CDX68033	Canola	cytosol, mitochondrion	41.5	40.13
Bra003661.1-P	Field mustard	cytosol, mitochondrion	41.5	40.13
Solyc12g056950.1.1	Tomato	cytosol, mitochondrion	37.41	39.86
CDX88407	Canola	cytosol, mitochondrion	41.5	39.61
CDX87485	Canola	cytosol, mitochondrion	41.5	39.61
Bra015639.1-P	Field mustard	cytosol, mitochondrion, plastid	41.5	39.61
CDY21344	Canola	nucleus	42.18	39.49
Bra031369.1-P	Field mustard	nucleus	42.18	39.49
CDY01294	Canola	nucleus	42.18	39.24
KRH53114	Soybean	nucleus	40.82	38.96
Solyc04g072780.2.1	Tomato	nucleus	44.22	38.69
GSMUA_Achr8P18580_001	Banana	cytosol, mitochondrion, nucleus, plastid	41.5	38.36
Zm00001d044849_P001	Maize	plastid	40.82	38.22
PGSC0003DMT400024491	Potato	nucleus	42.86	38.18
AT1G78020.1	Thale cress	mitochondrion	41.5	37.65
Bra008341.1-P	Field mustard	mitochondrion	41.5	37.42
CDY26845	Canola	mitochondrion	41.5	37.42
CDY14641	Canola	mitochondrion	41.5	37.42
Bra012309.1-P	Field mustard	nucleus	40.14	37.34
CDY00425	Canola	nucleus	40.14	37.34
Zm00001d052234_P001	Maize	plastid	39.46	36.94
Zm00001d020264_P001	Maize	nucleus	44.9	36.46
CDY38242	Canola	mitochondrion, nucleus	38.78	36.31
TraesCS5A01G191000.1	Wheat	cytosol	40.82	36.14
TraesCS5D01G200000.1	Wheat	cytosol	40.82	36.14
Zm00001d032292_P001	Maize	mitochondrion	46.26	35.98
Zm00001d005657_P002	Maize	nucleus	42.86	35.59
Zm00001d018076_P001	Maize	plastid	38.78	35.4
KXG30742	Sorghum	plastid	38.78	35.19
Os02t0751300-01	Rice	mitochondrion	34.69	34.69
Os09t0367900-02	Rice	cytosol	41.5	34.66
TraesCS6B01G331900.1	Wheat	mitochondrion	36.05	34.42
VIT_18s0001g05020.t01	Wine grape	extracellular, vacuole	46.94	33.17
TraesCS6D01G282200.1	Wheat	mitochondrion	34.69	33.12
HORVU6Hr1G073620.1	Barley	mitochondrion	29.93	32.59
Zm00001d050285_P001	Maize	mitochondrion	40.82	32.43
Os08t0407600-01	Rice	mitochondrion	43.54	32.16
EES14968	Sorghum	mitochondrion	42.86	31.66
EER96652	Sorghum	nucleus	42.18	31.47
TraesCS6A01G302700.1	Wheat	mitochondrion	34.01	31.25
TraesCS6A01G295900.1	Wheat	mitochondrion	27.89	29.08
TraesCS6A01G295600.1	Wheat	mitochondrion	29.25	29.05
TraesCS6B01G325800.1	Wheat	nucleus, plastid	31.29	28.4
TraesCS6A01G295800.1	Wheat	mitochondrion	27.21	28.37
TraesCS6D01G276300.1	Wheat	mitochondrion	27.21	28.37
TraesCS6D01G276200.1	Wheat	mitochondrion	27.89	27.7
TraesCS6B01G325700.1	Wheat	mitochondrion	27.21	26.49
HORVU6Hr1G075130.1	Barley	mitochondrion	21.77	19.75

Protein Annotations

EnsemblPlants:GSMUA_Achr10P24480_001	EnsemblPlants:GSMUA_Achr10T24480_001	EnsemblPlantsGene:GSMUA_Achr10G24480_001	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059
PANTHER:PTHR33059:SF74	PFAM:PF04570	PFscan:PS51795	SEG:seg	UniParc:UPI0002956F9C	UniProt:M0RL23
MapMan:27.3.3	:	:	:	:	:

Description

Putative DUF581 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G24480_001]

Coordinates

chr10:-:28922452..28923984

Molecular Weight (calculated)

15901.6 Da

IEP (calculated)

9.070

GRAVY (calculated)

-0.832

Length

147 amino acids

Sequence
(BLAST)

001: MLLGKRPRPP MRRTTSSTEF DAGPRHGATE VAQRTAGTGA DWRAASYVGS MLSPRGGVHR RNSGDFEAAA RTAPFLRACG LCNRRLGPGR DAYMYRGEVA
101: FCSLECRQQQ MNLDEQREKC SPTSMKDTPS PTDDTEQSGN GGTATAA

Best Arabidopsis Sequence Match ( AT1G22160.1 )
(BLAST)

001: MLLGKRQRPP IKRTTSLSEI KFDLNQPSEQ EPSDHQIQLV NVDEHRQVHQ RLLDQRLLAM VSPRGTQRRH SSDYSEDFLR SCSLCKRLLV HGRDIYMYRG
101: DRAFCSLECR QQQITVDERK EKKKGSVRST IVVATGTTTG ERVSAAV

Arabidopsis Description

Senescence-associated family protein (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8VY80]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.