Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT1G22160.1 | CDX85250 | AT3G29160.1 | 21798944 |
AT1G22160.1 | CDX86386 | AT3G29160.1 | 21798944 |
AT1G22160.1 | CDY04058 | AT3G29160.1 | 21798944 |
AT1G22160.1 | CDY44405 | AT3G29160.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra031369.1-P | Field mustard | nucleus | 100.0 | 100.0 |
CDY38242 | Canola | mitochondrion, nucleus | 94.9 | 94.9 |
CDX79242 | Canola | mitochondrion | 10.19 | 88.89 |
CDY01294 | Canola | nucleus | 71.97 | 71.52 |
CDY00425 | Canola | nucleus | 68.79 | 68.35 |
AT1G22160.1 | Thale cress | mitochondrion, nucleus | 62.42 | 66.67 |
CDX68033 | Canola | cytosol, mitochondrion | 52.87 | 54.61 |
CDX87485 | Canola | cytosol, mitochondrion | 53.5 | 54.55 |
CDX88407 | Canola | cytosol, mitochondrion | 52.87 | 53.9 |
CDX79243 | Canola | cytosol, plastid | 37.58 | 52.68 |
KRH18875 | Soybean | mitochondrion | 45.86 | 50.35 |
CDY26845 | Canola | mitochondrion | 52.23 | 50.31 |
CDY14641 | Canola | mitochondrion | 51.59 | 49.69 |
KRH62389 | Soybean | mitochondrion | 42.68 | 49.26 |
GSMUA_Achr3P04440_001 | Banana | mitochondrion | 40.13 | 48.09 |
KRH16681 | Soybean | mitochondrion | 45.22 | 47.02 |
CDY08827 | Canola | mitochondrion | 32.48 | 46.79 |
CDY31291 | Canola | cytosol | 33.12 | 45.22 |
CDY33991 | Canola | mitochondrion | 32.48 | 44.35 |
KRH53114 | Soybean | nucleus | 43.31 | 44.16 |
GSMUA_Achr9P13000_001 | Banana | mitochondrion, nucleus | 39.49 | 42.47 |
GSMUA_Achr10P... | Banana | nucleus | 39.49 | 42.18 |
PGSC0003DMT400024491 | Potato | nucleus | 42.68 | 40.61 |
Solyc04g072780.2.1 | Tomato | nucleus | 42.68 | 39.88 |
GSMUA_Achr7P17710_001 | Banana | mitochondrion | 38.22 | 39.47 |
TraesCS7A01G182100.1 | Wheat | mitochondrion | 34.39 | 39.13 |
TraesCS7D01G183500.1 | Wheat | mitochondrion | 35.03 | 38.73 |
TraesCS7B01G086900.1 | Wheat | mitochondrion, nucleus | 34.39 | 38.57 |
CDY71221 | Canola | cytosol, nucleus, plastid | 23.57 | 38.54 |
OQU76080 | Sorghum | cytosol | 31.85 | 37.31 |
GSMUA_Achr5P24390_001 | Banana | cytosol | 29.94 | 37.3 |
GSMUA_Achr4P01820_001 | Banana | mitochondrion | 37.58 | 36.65 |
CDX72671 | Canola | cytosol | 30.57 | 36.64 |
Os06t0223700-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 33.12 | 36.62 |
GSMUA_Achr6P02010_001 | Banana | mitochondrion, nucleus | 35.67 | 36.13 |
GSMUA_Achr6P04060_001 | Banana | mitochondrion, nucleus | 33.76 | 34.19 |
TraesCS5D01G200000.1 | Wheat | cytosol | 35.67 | 33.73 |
VIT_18s0001g05020.t01 | Wine grape | extracellular, vacuole | 44.59 | 33.65 |
TraesCS5A01G191000.1 | Wheat | cytosol | 35.03 | 33.13 |
Zm00001d032292_P001 | Maize | mitochondrion | 37.58 | 31.22 |
Zm00001d020264_P001 | Maize | nucleus | 35.67 | 30.94 |
GSMUA_Achr8P18580_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 31.21 | 30.82 |
EER96652 | Sorghum | nucleus | 37.58 | 29.95 |
TraesCS6D01G282200.1 | Wheat | mitochondrion | 29.3 | 29.87 |
TraesCS6B01G331900.1 | Wheat | mitochondrion | 29.3 | 29.87 |
Zm00001d005657_P002 | Maize | nucleus | 33.12 | 29.38 |
Os02t0751300-01 | Rice | mitochondrion | 27.39 | 29.25 |
Zm00001d050285_P001 | Maize | mitochondrion | 34.39 | 29.19 |
Os08t0407600-01 | Rice | mitochondrion | 36.94 | 29.15 |
EES14968 | Sorghum | mitochondrion | 36.94 | 29.15 |
Os09t0367900-02 | Rice | cytosol | 32.48 | 28.98 |
Zm00001d044849_P001 | Maize | plastid | 28.66 | 28.66 |
HORVU6Hr1G073620.1 | Barley | mitochondrion | 23.57 | 27.41 |
Zm00001d018076_P001 | Maize | plastid | 28.03 | 27.33 |
TraesCS6A01G302700.1 | Wheat | mitochondrion | 27.39 | 26.88 |
Zm00001d052234_P001 | Maize | plastid | 26.75 | 26.75 |
KXG30742 | Sorghum | plastid | 27.39 | 26.54 |
TraesCS6A01G295900.1 | Wheat | mitochondrion | 19.75 | 21.99 |
TraesCS6D01G276300.1 | Wheat | mitochondrion | 19.11 | 21.28 |
TraesCS6A01G295800.1 | Wheat | mitochondrion | 19.11 | 21.28 |
TraesCS6A01G295600.1 | Wheat | mitochondrion | 19.75 | 20.95 |
TraesCS6D01G276200.1 | Wheat | mitochondrion | 18.47 | 19.59 |
HORVU6Hr1G075130.1 | Barley | mitochondrion | 19.11 | 18.52 |
TraesCS6B01G325800.1 | Wheat | nucleus, plastid | 19.11 | 18.52 |
TraesCS6B01G325700.1 | Wheat | mitochondrion | 17.2 | 17.88 |
Protein Annotations
EnsemblPlants:CDY21344 | EnsemblPlantsGene:GSBRNA2T00015697001 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF74 |
PFAM:PF04570 | PFscan:PS51795 | ProteinID:CDY21344 | ProteinID:CDY21344.1 | UniParc:UPI000254752A | UniProt:A0A078G7F9 |
MapMan:27.3.3 | : | : | : | : | : |
Description
BnaA09g30830DBnaA09g30830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7F9]
Coordinates
chrLK032120:+:58332..59172
Molecular Weight (calculated)
17898.5 Da
IEP (calculated)
9.388
GRAVY (calculated)
-0.723
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLLGKRQRP EIKRTTSLSE IKFDLNLPCE PEEPSDHQHV QTLSPRKSKL VTVDEHRQVH HGLLDQRLLA MVSPRGTQRR HSEDYSTHAG DFLRCCSLCK
101: RNLVPGRDIY MYRGDRAFCS LECRQQQITV DERKEKGLVR STVAAGSGKG ERVSAAV
101: RNLVPGRDIY MYRGDRAFCS LECRQQQITV DERKEKGLVR STVAAGSGKG ERVSAAV
001: MLLGKRQRPP IKRTTSLSEI KFDLNQPSEQ EPSDHQIQLV NVDEHRQVHQ RLLDQRLLAM VSPRGTQRRH SSDYSEDFLR SCSLCKRLLV HGRDIYMYRG
101: DRAFCSLECR QQQITVDERK EKKKGSVRST IVVATGTTTG ERVSAAV
101: DRAFCSLECR QQQITVDERK EKKKGSVRST IVVATGTTTG ERVSAAV
Arabidopsis Description
Senescence-associated family protein (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8VY80]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.