Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os05t0530500-02 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G22160.1 | Os05t0530500-02 | AT3G29160.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G182100.1 | Wheat | mitochondrion | 65.49 | 67.39 |
| TraesCS7D01G183500.1 | Wheat | mitochondrion | 66.9 | 66.9 |
| TraesCS7B01G086900.1 | Wheat | mitochondrion, nucleus | 61.97 | 62.86 |
| CDX79242 | Canola | mitochondrion | 7.04 | 55.56 |
| OQU76080 | Sorghum | cytosol | 52.11 | 55.22 |
| GSMUA_Achr3P04440_001 | Banana | mitochondrion | 46.48 | 50.38 |
| Zm00001d044849_P001 | Maize | plastid | 55.63 | 50.32 |
| GSMUA_Achr9P13000_001 | Banana | mitochondrion, nucleus | 46.48 | 45.21 |
| GSMUA_Achr10P... | Banana | nucleus | 45.07 | 43.54 |
| GSMUA_Achr7P17710_001 | Banana | mitochondrion | 45.77 | 42.76 |
| GSMUA_Achr6P02010_001 | Banana | mitochondrion, nucleus | 46.48 | 42.58 |
| GSMUA_Achr4P01820_001 | Banana | mitochondrion | 42.25 | 37.27 |
| GSMUA_Achr8P18580_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 41.55 | 37.11 |
| CDX79243 | Canola | cytosol, plastid | 28.87 | 36.61 |
| GSMUA_Achr5P24390_001 | Banana | cytosol | 32.39 | 36.51 |
| KRH18875 | Soybean | mitochondrion | 36.62 | 36.36 |
| Bra015639.1-P | Field mustard | cytosol, mitochondrion, plastid | 38.73 | 35.71 |
| CDX88407 | Canola | cytosol, mitochondrion | 38.73 | 35.71 |
| Os09t0367900-02 | Rice | cytosol | 43.66 | 35.23 |
| CDX87485 | Canola | cytosol, mitochondrion | 38.03 | 35.06 |
| AT1G78020.1 | Thale cress | mitochondrion | 39.44 | 34.57 |
| PGSC0003DMT400024491 | Potato | nucleus | 40.14 | 34.55 |
| Solyc04g072780.2.1 | Tomato | nucleus | 40.85 | 34.52 |
| KRH16681 | Soybean | mitochondrion | 35.92 | 33.77 |
| Bra008341.1-P | Field mustard | mitochondrion | 38.73 | 33.74 |
| CDY26845 | Canola | mitochondrion | 38.73 | 33.74 |
| Bra031369.1-P | Field mustard | nucleus | 36.62 | 33.12 |
| CDY21344 | Canola | nucleus | 36.62 | 33.12 |
| KRH62389 | Soybean | mitochondrion | 31.69 | 33.09 |
| Bra003661.1-P | Field mustard | cytosol, mitochondrion | 35.21 | 32.89 |
| CDY14641 | Canola | mitochondrion | 37.32 | 32.52 |
| CDY01294 | Canola | nucleus | 35.92 | 32.28 |
| GSMUA_Achr6P04060_001 | Banana | mitochondrion, nucleus | 35.21 | 32.26 |
| CDX68033 | Canola | cytosol, mitochondrion | 34.51 | 32.24 |
| Os08t0407600-01 | Rice | mitochondrion | 45.07 | 32.16 |
| AT1G22160.1 | Thale cress | mitochondrion, nucleus | 33.1 | 31.97 |
| PGSC0003DMT400022055 | Potato | mitochondrion | 30.99 | 31.88 |
| Solyc12g056950.1.1 | Tomato | cytosol, mitochondrion | 30.99 | 31.88 |
| CDY00425 | Canola | nucleus | 35.21 | 31.65 |
| Os02t0751300-01 | Rice | mitochondrion | 32.39 | 31.29 |
| CDY38242 | Canola | mitochondrion, nucleus | 34.51 | 31.21 |
| Bra012309.1-P | Field mustard | nucleus | 34.51 | 31.01 |
| KRH53114 | Soybean | nucleus | 33.1 | 30.52 |
| VIT_18s0001g05020.t01 | Wine grape | extracellular, vacuole | 36.62 | 25.0 |
Protein Annotations
| EMBL:AK070214 | EnsemblPlants:Os06t0223700-01 | EnsemblPlantsGene:Os06g0223700 | EntrezGene:4340530 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom |
| PANTHER:PTHR33059 | PANTHER:PTHR33059:SF4 | PFAM:PF04570 | PFscan:PS51795 | ProteinID:BAD38182.1 | ProteinID:BAF19098.1 |
| ProteinID:BAS96848.1 | ProteinID:EAZ36322.1 | RefSeq:XP_015641426.1 | SEG:seg | UniParc:UPI00004264CC | UniProt:Q67UI7 |
| MapMan:27.3.3 | : | : | : | : | : |
Description
Protein of unknown function DUF581 family protein. (Os06t0223700-01)
Coordinates
chr6:-:6395390..6397221
Molecular Weight (calculated)
15027.6 Da
IEP (calculated)
9.121
GRAVY (calculated)
-0.734
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTLGKRHRN NSSMRRTTSM SGFAVAEEEE QQGRQPPARA ARGGGGGGSA APSPGWGAMQ RRHSGDFAVA ETAAFLKACG ICNRRLGPGR DTFIYMGEVA
101: FCSHECRQQQ MNLDELNEKK CFQREGGGGS DKSGNSGAVA AA
101: FCSHECRQQQ MNLDELNEKK CFQREGGGGS DKSGNSGAVA AA
001: MLLGKRQRPP INRTTSLSEI KFDLNLPSES EPSNQQKPTV ASPYGSNGQA VTAAVDQNRG FLDQRLLSMV TPRGNLRRHS GDFSDAGHFL RSCALCERLL
101: VPGRDIYMYR GDKAFCSSEC RQEQMAQDER KEKGKSAAPA KEPAVTAPAR AKPGKGRAAA AV
101: VPGRDIYMYR GDKAFCSSEC RQEQMAQDER KEKGKSAAPA KEPAVTAPAR AKPGKGRAAA AV
Arabidopsis Description
F28K19.24 [Source:UniProtKB/TrEMBL;Acc:Q9SGZ8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.