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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400022055 Potato mitochondrion 93.48 93.48
GSMUA_Achr3P04440_001 Banana mitochondrion 41.3 43.51
KRH16681 Soybean mitochondrion 47.1 43.05
KRH18875 Soybean mitochondrion 44.2 42.66
KRH62389 Soybean mitochondrion 39.86 40.44
Solyc04g072780.2.1 Tomato nucleus 48.55 39.88
GSMUA_Achr9P13000_001 Banana mitochondrion, nucleus 40.58 38.36
GSMUA_Achr7P17710_001 Banana mitochondrion 42.03 38.16
GSMUA_Achr10P... Banana nucleus 39.86 37.41
VIT_18s0001g05020.t01 Wine grape extracellular, vacuole 54.35 36.06
KRH53114 Soybean nucleus 39.86 35.71
GSMUA_Achr6P02010_001 Banana mitochondrion, nucleus 39.86 35.48
GSMUA_Achr5P24390_001 Banana cytosol 31.16 34.13
TraesCS7A01G182100.1 Wheat mitochondrion 33.33 33.33
Solyc04g054760.2.1 Tomato mitochondrion, nucleus 37.68 33.33
Solyc05g051860.2.1 Tomato nucleus 35.51 32.89
GSMUA_Achr4P01820_001 Banana mitochondrion 37.68 32.3
TraesCS7D01G183500.1 Wheat mitochondrion 32.61 31.69
TraesCS7B01G086900.1 Wheat mitochondrion, nucleus 31.88 31.43
Os06t0223700-01 Rice cytosol, mitochondrion, nucleus, plastid 31.88 30.99
Zm00001d020264_P001 Maize nucleus 39.86 30.39
GSMUA_Achr6P04060_001 Banana mitochondrion, nucleus 34.06 30.32
OQU76080 Sorghum cytosol 28.26 29.1
GSMUA_Achr8P18580_001 Banana cytosol, mitochondrion, nucleus, plastid 33.33 28.93
Zm00001d032292_P001 Maize mitochondrion 39.13 28.57
Zm00001d005657_P002 Maize nucleus 36.23 28.25
Os09t0367900-02 Rice cytosol 34.78 27.27
Zm00001d050285_P001 Maize mitochondrion 36.23 27.03
EER96652 Sorghum nucleus 38.41 26.9
Zm00001d044849_P001 Maize plastid 30.43 26.75
Zm00001d052234_P001 Maize plastid 30.43 26.75
Zm00001d018076_P001 Maize plastid 31.16 26.71
TraesCS6B01G331900.1 Wheat mitochondrion 29.71 26.62
Os02t0751300-01 Rice mitochondrion 28.26 26.53
HORVU6Hr1G073620.1 Barley mitochondrion 25.36 25.93
TraesCS5D01G200000.1 Wheat cytosol 30.43 25.3
EES14968 Sorghum mitochondrion 36.23 25.13
KXG30742 Sorghum plastid 28.99 24.69
TraesCS6D01G282200.1 Wheat mitochondrion 27.54 24.68
Os08t0407600-01 Rice mitochondrion 35.51 24.62
TraesCS6A01G302700.1 Wheat mitochondrion 28.26 24.38
TraesCS5A01G191000.1 Wheat cytosol 28.99 24.1
TraesCS6A01G295900.1 Wheat mitochondrion 23.19 22.7
TraesCS6A01G295600.1 Wheat mitochondrion 23.91 22.3
TraesCS6B01G325700.1 Wheat mitochondrion 23.91 21.85
TraesCS6A01G295800.1 Wheat mitochondrion 21.74 21.28
TraesCS6D01G276300.1 Wheat mitochondrion 21.74 21.28
TraesCS6D01G276200.1 Wheat mitochondrion 22.46 20.95
TraesCS6B01G325800.1 Wheat nucleus, plastid 22.46 19.14
HORVU6Hr1G075130.1 Barley mitochondrion 18.12 15.43
Protein Annotations
EnsemblPlants:Solyc12g056950.1.1EnsemblPlantsGene:Solyc12g056950.1InterPro:IPR007650InterPro:Zf-FLZ_domPANTHER:PTHR33059PANTHER:PTHR33059:SF74
PFAM:PF04570PFscan:PS51795UniParc:UPI000276A1E2UniProt:K4DG26MapMan:27.3.3:
Description
No Description!
Coordinates
chr12:-:63032616..63033510
Molecular Weight (calculated)
15505.5 Da
IEP (calculated)
9.937
GRAVY (calculated)
-0.714
Length
138 amino acids
Sequence
(BLAST)
001: MMIGKRARPP IIKRTTSMTE FTLDPTLNYQ LDHHTPRSNG QDQTVLLTRR KSADFIESSH FLRACSLCER HLISGHDIYM YRGDSAFCSL DCREKQMNQD
101: ARKEKCTSSA TTRKKSTNSV PSVASGTGST VPLPQARP
Best Arabidopsis Sequence Match ( AT1G78020.1 )
(BLAST)
001: MLLGKRQRPP INRTTSLSEI KFDLNLPSES EPSNQQKPTV ASPYGSNGQA VTAAVDQNRG FLDQRLLSMV TPRGNLRRHS GDFSDAGHFL RSCALCERLL
101: VPGRDIYMYR GDKAFCSSEC RQEQMAQDER KEKGKSAAPA KEPAVTAPAR AKPGKGRAAA AV
Arabidopsis Description
F28K19.24 [Source:UniProtKB/TrEMBL;Acc:Q9SGZ8]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.