Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- endoplasmic reticulum 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G081310.4 | |
| HORVU3Hr1G069190.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G22160.1 | HORVU1Hr1G081310.4 | AT3G29160.1 | 21798944 |
| AT1G22160.1 | HORVU3Hr1G069190.1 | AT3G29160.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79242 | Canola | mitochondrion | 6.79 | 61.11 |
| TraesCS6B01G331900.1 | Wheat | mitochondrion | 56.79 | 59.74 |
| TraesCS6A01G302700.1 | Wheat | mitochondrion | 53.7 | 54.38 |
| TraesCS6D01G282200.1 | Wheat | mitochondrion | 44.44 | 46.75 |
| HORVU6Hr1G073620.1 | Barley | mitochondrion | 35.19 | 42.22 |
| GSMUA_Achr3P04440_001 | Banana | mitochondrion | 21.6 | 26.72 |
| Os02t0751300-01 | Rice | mitochondrion | 22.84 | 25.17 |
| GSMUA_Achr5P24390_001 | Banana | cytosol | 18.52 | 23.81 |
| Zm00001d052234_P001 | Maize | plastid | 21.6 | 22.29 |
| GSMUA_Achr10P... | Banana | nucleus | 19.75 | 21.77 |
| GSMUA_Achr4P01820_001 | Banana | mitochondrion | 21.6 | 21.74 |
| GSMUA_Achr7P17710_001 | Banana | mitochondrion | 20.37 | 21.71 |
| KRH18875 | Soybean | mitochondrion | 19.14 | 21.68 |
| KXG30742 | Sorghum | plastid | 21.6 | 21.6 |
| GSMUA_Achr9P13000_001 | Banana | mitochondrion, nucleus | 19.14 | 21.23 |
| AT1G22160.1 | Thale cress | mitochondrion, nucleus | 19.14 | 21.09 |
| Bra012309.1-P | Field mustard | nucleus | 20.37 | 20.89 |
| GSMUA_Achr8P18580_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 20.37 | 20.75 |
| Zm00001d018076_P001 | Maize | plastid | 20.37 | 20.5 |
| CDY00425 | Canola | nucleus | 19.75 | 20.25 |
| CDX87485 | Canola | cytosol, mitochondrion | 19.14 | 20.13 |
| GSMUA_Achr6P04060_001 | Banana | mitochondrion, nucleus | 19.14 | 20.0 |
| KRH16681 | Soybean | mitochondrion | 18.52 | 19.87 |
| CDY38242 | Canola | mitochondrion, nucleus | 19.14 | 19.75 |
| CDX88407 | Canola | cytosol, mitochondrion | 18.52 | 19.48 |
| Bra015639.1-P | Field mustard | cytosol, mitochondrion, plastid | 18.52 | 19.48 |
| GSMUA_Achr6P02010_001 | Banana | mitochondrion, nucleus | 18.52 | 19.35 |
| KRH62389 | Soybean | mitochondrion | 16.05 | 19.12 |
| CDY21344 | Canola | nucleus | 18.52 | 19.11 |
| Bra031369.1-P | Field mustard | nucleus | 18.52 | 19.11 |
| CDY01294 | Canola | nucleus | 18.52 | 18.99 |
| PGSC0003DMT400022055 | Potato | mitochondrion | 16.05 | 18.84 |
| AT1G78020.1 | Thale cress | mitochondrion | 18.52 | 18.52 |
| Solyc04g072780.2.1 | Tomato | nucleus | 19.14 | 18.45 |
| CDX68033 | Canola | cytosol, mitochondrion | 17.28 | 18.42 |
| Bra003661.1-P | Field mustard | cytosol, mitochondrion | 17.28 | 18.42 |
| CDY14641 | Canola | mitochondrion | 18.52 | 18.4 |
| Bra008341.1-P | Field mustard | mitochondrion | 18.52 | 18.4 |
| CDY26845 | Canola | mitochondrion | 18.52 | 18.4 |
| KRH53114 | Soybean | nucleus | 17.28 | 18.18 |
| Solyc12g056950.1.1 | Tomato | cytosol, mitochondrion | 15.43 | 18.12 |
| PGSC0003DMT400024491 | Potato | nucleus | 16.67 | 16.36 |
| VIT_18s0001g05020.t01 | Wine grape | extracellular, vacuole | 20.37 | 15.87 |
| CDX79243 | Canola | cytosol, plastid | 10.49 | 15.18 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G075130.1 | EnsemblPlantsGene:HORVU6Hr1G075130 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR007650 |
| InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF4 | PFAM:PF04570 | PFscan:PS51795 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000B48283B | UniProt:A0A287UQ93 | MapMan:27.3.3 | : | : |
Description
No Description!
Coordinates
chrchr6H:+:518268182..518268786
Molecular Weight (calculated)
17727.7 Da
IEP (calculated)
12.403
GRAVY (calculated)
-0.252
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGKRQRSML MRRTTSLASM PSVPKQVRQG SGGDDDKHPR AGPSSSVSAG AVGMGGGGGY PSPRRDAFAG LMITAAFLSA CGFCAKPLGP GEDTYIYRYR
101: RRRCFSHSLS VLRRNVRRNS RAPAFVSFFV RFGGLLVISG RAPISLSRRF AMRIPRRSFG FF
101: RRRCFSHSLS VLRRNVRRNS RAPAFVSFFV RFGGLLVISG RAPISLSRRF AMRIPRRSFG FF
001: MLKTRAMFPH KDQAMSLSLD PQSDLVVGHT NNRPITNPLA LSLLIGLNNK NKCISDSDFV RSPKSPLEFR VLSTMADSFF LRSPRSSLTA HLNCCCGPAA
101: KVGLSIVDSL GDDRCLLPDI VFGPALRIKC SEVMDKHPKL LFPVANKSKK IENERSGVVF EIGDNSSETE PVGLRNRSFS ANDCLRKTRV LSRSKLGQEG
201: DFPGSGSDNA FSSEDDMEDY TCIIAHGPNP KTTHIYGDRV LECHKNELKG DEDNKEKFGS VFPSDNFLGI CNFCNKKLGG GDDIYMYREK SFCSEECRSE
301: EMMIDEEDLE EPCIDMHESL KKLF
101: KVGLSIVDSL GDDRCLLPDI VFGPALRIKC SEVMDKHPKL LFPVANKSKK IENERSGVVF EIGDNSSETE PVGLRNRSFS ANDCLRKTRV LSRSKLGQEG
201: DFPGSGSDNA FSSEDDMEDY TCIIAHGPNP KTTHIYGDRV LECHKNELKG DEDNKEKFGS VFPSDNFLGI CNFCNKKLGG GDDIYMYREK SFCSEECRSE
301: EMMIDEEDLE EPCIDMHESL KKLF
Arabidopsis Description
At2g25690 [Source:UniProtKB/TrEMBL;Acc:Q9SL94]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.