Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79242 | Canola | mitochondrion | 11.11 | 100.0 |
| CDX87485 | Canola | cytosol, mitochondrion | 67.9 | 71.43 |
| Bra015639.1-P | Field mustard | cytosol, mitochondrion, plastid | 67.28 | 70.78 |
| CDX88407 | Canola | cytosol, mitochondrion | 67.28 | 70.78 |
| CDX68033 | Canola | cytosol, mitochondrion | 59.88 | 63.82 |
| CDY14641 | Canola | mitochondrion | 64.2 | 63.8 |
| Bra003661.1-P | Field mustard | cytosol, mitochondrion | 59.26 | 63.16 |
| Bra008341.1-P | Field mustard | mitochondrion | 62.96 | 62.58 |
| CDY26845 | Canola | mitochondrion | 62.96 | 62.58 |
| CDX79243 | Canola | cytosol, plastid | 43.21 | 62.5 |
| AT1G22160.1 | Thale cress | mitochondrion, nucleus | 53.09 | 58.5 |
| KRH18875 | Soybean | mitochondrion | 45.06 | 51.05 |
| KRH16681 | Soybean | mitochondrion | 44.44 | 47.68 |
| KRH62389 | Soybean | mitochondrion | 38.89 | 46.32 |
| GSMUA_Achr3P04440_001 | Banana | mitochondrion | 35.8 | 44.27 |
| GSMUA_Achr9P13000_001 | Banana | mitochondrion, nucleus | 38.89 | 43.15 |
| KRH53114 | Soybean | nucleus | 39.51 | 41.56 |
| GSMUA_Achr10P... | Banana | nucleus | 37.65 | 41.5 |
| PGSC0003DMT400024491 | Potato | nucleus | 41.98 | 41.21 |
| Solyc04g072780.2.1 | Tomato | nucleus | 42.59 | 41.07 |
| Os06t0223700-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 34.57 | 39.44 |
| GSMUA_Achr6P02010_001 | Banana | mitochondrion, nucleus | 37.65 | 39.35 |
| TraesCS7A01G182100.1 | Wheat | mitochondrion | 33.33 | 39.13 |
| GSMUA_Achr7P17710_001 | Banana | mitochondrion | 36.42 | 38.82 |
| AT4G39795.1 | Thale cress | mitochondrion | 29.63 | 38.1 |
| GSMUA_Achr5P24390_001 | Banana | cytosol | 29.63 | 38.1 |
| AT5G65040.1 | Thale cress | mitochondrion | 26.54 | 38.05 |
| OQU76080 | Sorghum | cytosol | 30.25 | 36.57 |
| VIT_18s0001g05020.t01 | Wine grape | extracellular, vacuole | 46.91 | 36.54 |
| TraesCS7B01G086900.1 | Wheat | mitochondrion, nucleus | 31.48 | 36.43 |
| TraesCS7D01G183500.1 | Wheat | mitochondrion | 31.48 | 35.92 |
| GSMUA_Achr4P01820_001 | Banana | mitochondrion | 35.19 | 35.4 |
| GSMUA_Achr6P04060_001 | Banana | mitochondrion, nucleus | 32.1 | 33.55 |
| Zm00001d032292_P001 | Maize | mitochondrion | 38.27 | 32.8 |
| TraesCS5D01G200000.1 | Wheat | cytosol | 32.1 | 31.33 |
| TraesCS5A01G191000.1 | Wheat | cytosol | 31.48 | 30.72 |
| Os09t0367900-02 | Rice | cytosol | 33.33 | 30.68 |
| EES14968 | Sorghum | mitochondrion | 37.04 | 30.15 |
| Zm00001d020264_P001 | Maize | nucleus | 33.33 | 29.83 |
| Zm00001d050285_P001 | Maize | mitochondrion | 33.95 | 29.73 |
| Os02t0751300-01 | Rice | mitochondrion | 26.54 | 29.25 |
| TraesCS6D01G282200.1 | Wheat | mitochondrion | 27.78 | 29.22 |
| Os08t0407600-01 | Rice | mitochondrion | 35.8 | 29.15 |
| Zm00001d005657_P002 | Maize | nucleus | 31.48 | 28.81 |
| Zm00001d044849_P001 | Maize | plastid | 27.78 | 28.66 |
| GSMUA_Achr8P18580_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 27.78 | 28.3 |
| TraesCS6B01G331900.1 | Wheat | mitochondrion | 26.54 | 27.92 |
| TraesCS6A01G302700.1 | Wheat | mitochondrion | 26.54 | 26.88 |
| Zm00001d052234_P001 | Maize | plastid | 25.93 | 26.75 |
| EER96652 | Sorghum | nucleus | 32.1 | 26.4 |
| KXG30742 | Sorghum | plastid | 25.93 | 25.93 |
| Zm00001d018076_P001 | Maize | plastid | 25.31 | 25.47 |
| HORVU6Hr1G073620.1 | Barley | mitochondrion | 20.99 | 25.19 |
| TraesCS6D01G276300.1 | Wheat | mitochondrion | 19.75 | 22.7 |
| TraesCS6A01G295900.1 | Wheat | mitochondrion | 19.14 | 21.99 |
| TraesCS6A01G295800.1 | Wheat | mitochondrion | 19.14 | 21.99 |
| TraesCS6A01G295600.1 | Wheat | mitochondrion | 19.14 | 20.95 |
| TraesCS6B01G325700.1 | Wheat | mitochondrion | 19.14 | 20.53 |
| TraesCS6D01G276200.1 | Wheat | mitochondrion | 18.52 | 20.27 |
| HORVU6Hr1G075130.1 | Barley | mitochondrion | 18.52 | 18.52 |
| TraesCS6B01G325800.1 | Wheat | nucleus, plastid | 17.9 | 17.9 |
Protein Annotations
| MapMan:27.3.3 | EntrezGene:844137 | UniProt:A0A178WHS6 | ProteinID:AAF17687.1 | ProteinID:AEE36058.1 | ArrayExpress:AT1G78020 |
| EnsemblPlantsGene:AT1G78020 | RefSeq:AT1G78020 | TAIR:AT1G78020 | RefSeq:AT1G78020-TAIR-G | EnsemblPlants:AT1G78020.1 | TAIR:AT1G78020.1 |
| EMBL:AY063882 | EMBL:AY117331 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0009791 | GO:GO:0090351 | InterPro:IPR007650 | RefSeq:NP_565167.1 | ProteinID:OAP17023.1 | PFAM:PF04570 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS51795 | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF74 | UniProt:Q9SGZ8 | UniParc:UPI00000AA9ED |
| InterPro:Zf-FLZ_dom | SEG:seg | : | : | : | : |
Description
F28K19.24 [Source:UniProtKB/TrEMBL;Acc:Q9SGZ8]
Coordinates
chr1:+:29338530..29339760
Molecular Weight (calculated)
17688.0 Da
IEP (calculated)
10.258
GRAVY (calculated)
-0.707
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLGKRQRPP INRTTSLSEI KFDLNLPSES EPSNQQKPTV ASPYGSNGQA VTAAVDQNRG FLDQRLLSMV TPRGNLRRHS GDFSDAGHFL RSCALCERLL
101: VPGRDIYMYR GDKAFCSSEC RQEQMAQDER KEKGKSAAPA KEPAVTAPAR AKPGKGRAAA AV
101: VPGRDIYMYR GDKAFCSSEC RQEQMAQDER KEKGKSAAPA KEPAVTAPAR AKPGKGRAAA AV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.