CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01406
EES19859

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G22160.1	EES01406	AT3G29160.1	21798944
AT1G22160.1	EES19859	AT3G29160.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052234_P001	Maize	plastid	67.9	70.06
Zm00001d018076_P001	Maize	plastid	61.11	61.49
Os02t0751300-01	Rice	mitochondrion	50.0	55.1
CDX79242	Canola	mitochondrion	5.56	50.0
GSMUA_Achr3P04440_001	Banana	mitochondrion	36.42	45.04
TraesCS6B01G331900.1	Wheat	mitochondrion	42.59	44.81
TraesCS6D01G282200.1	Wheat	mitochondrion	40.74	42.86
GSMUA_Achr9P13000_001	Banana	mitochondrion, nucleus	38.27	42.47
TraesCS6A01G302700.1	Wheat	mitochondrion	39.51	40.0
GSMUA_Achr10P...	Banana	nucleus	35.19	38.78
GSMUA_Achr6P02010_001	Banana	mitochondrion, nucleus	36.42	38.06
OQU76080	Sorghum	cytosol	31.48	38.06
GSMUA_Achr7P17710_001	Banana	mitochondrion	34.57	36.84
KRH18875	Soybean	mitochondrion	30.25	34.27
TraesCS6A01G295900.1	Wheat	mitochondrion	29.01	33.33
TraesCS6A01G295800.1	Wheat	mitochondrion	29.01	33.33
GSMUA_Achr8P18580_001	Banana	cytosol, mitochondrion, nucleus, plastid	32.72	33.33
GSMUA_Achr6P04060_001	Banana	mitochondrion, nucleus	31.48	32.9
TraesCS6B01G325800.1	Wheat	nucleus, plastid	32.72	32.72
TraesCS6D01G276300.1	Wheat	mitochondrion	28.4	32.62
HORVU6Hr1G073620.1	Barley	mitochondrion	27.16	32.59
GSMUA_Achr5P24390_001	Banana	cytosol	25.31	32.54
TraesCS6A01G295600.1	Wheat	mitochondrion	29.63	32.43
KRH62389	Soybean	mitochondrion	27.16	32.35
EER96652	Sorghum	nucleus	38.89	31.98
GSMUA_Achr4P01820_001	Banana	mitochondrion	31.48	31.68
KRH16681	Soybean	mitochondrion	29.01	31.13
TraesCS6D01G276200.1	Wheat	mitochondrion	28.4	31.08
KRH53114	Soybean	nucleus	28.4	29.87
PGSC0003DMT400022055	Potato	mitochondrion	25.31	29.71
CDX79243	Canola	cytosol, plastid	20.37	29.46
Solyc04g072780.2.1	Tomato	nucleus	30.25	29.17
Solyc12g056950.1.1	Tomato	cytosol, mitochondrion	24.69	28.99
AT1G22160.1	Thale cress	mitochondrion, nucleus	25.93	28.57
Bra015639.1-P	Field mustard	cytosol, mitochondrion, plastid	27.16	28.57
CDX88407	Canola	cytosol, mitochondrion	27.16	28.57
CDY14641	Canola	mitochondrion	28.4	28.22
CDY26845	Canola	mitochondrion	28.4	28.22
Bra008341.1-P	Field mustard	mitochondrion	28.4	28.22
CDX87485	Canola	cytosol, mitochondrion	26.54	27.92
Bra012309.1-P	Field mustard	nucleus	27.16	27.85
Bra031369.1-P	Field mustard	nucleus	26.54	27.39
CDY21344	Canola	nucleus	26.54	27.39
VIT_18s0001g05020.t01	Wine grape	extracellular, vacuole	34.57	26.92
CDY01294	Canola	nucleus	25.93	26.58
CDY38242	Canola	mitochondrion, nucleus	25.31	26.11
PGSC0003DMT400024491	Potato	nucleus	26.54	26.06
CDY00425	Canola	nucleus	25.31	25.95
AT1G78020.1	Thale cress	mitochondrion	25.93	25.93
TraesCS6B01G325700.1	Wheat	mitochondrion	24.07	25.83
CDX68033	Canola	cytosol, mitochondrion	23.46	25.0
Bra003661.1-P	Field mustard	cytosol, mitochondrion	23.46	25.0
EES14968	Sorghum	mitochondrion	30.25	24.62
HORVU6Hr1G075130.1	Barley	mitochondrion	21.6	21.6

Protein Annotations

EnsemblPlants:KXG30742	EnsemblPlantsGene:SORBI_3004G234300	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF4
PFAM:PF04570	PFscan:PS51795	ProteinID:KXG30742	ProteinID:KXG30742.1	SEG:seg	UniParc:UPI0001FCA97B
UniProt:A0A194YRC3	MapMan:27.3.3	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:58260067..58261571

Molecular Weight (calculated)

16586.4 Da

IEP (calculated)

8.190

GRAVY (calculated)

-0.320

Length

162 amino acids

Sequence
(BLAST)

001: MEPAERIESG SALGKRPRTK VLPRTASLVT VPSAAKQGRR QERAGAGVPS SSSLPAGGAG IGAGGGGGAV PSFYYGPFTT VETAAFLKAC GLCNRRLGPG
101: YDTFIYRGEV AFCSQECREK QIEYDERMEQ TCSLTSIKEA PSVAGASGSD QSGSGGETVA AA

Best Arabidopsis Sequence Match ( AT5G65040.1 )
(BLAST)

001: MVLGKRHGSL IKRTTSMKMI TLDTPTIYDA SQPSDHLTFH QHPHNPMVVM ASNYDDFLKT CSLCNRSLCH HRDIYMYRGN NAFCSLECRE KQIKLDEKKA
101: KTGFVTSKKP IRI

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9LV75]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.