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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EER88899
EER93064
EER96652
EER98550
EER98690
EER98873
EES05120
EES12026
EES12241
EES14968
EES15016
KXG25821
KXG26065
KXG30464
KXG30742
KXG33717
KXG37739
KXG39393
KXG40392
OQU76080
OQU77880
OQU82027
OQU89260
OQU90452

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G29160.1 KXG33717 AT1G07310.1 21798944
AT3G29160.1 EER93064 AT1G09020.1 17028154
AT3G29160.1 EER93064 AT1G09020.1 21558384
AT3G29160.1 EER98690 AT1G25470.1 21798944
AT3G29160.1 OQU89260 AT1G25470.1 21798944
AT3G29160.1 EER88899 AT1G51600.1 21798944
AT3G29160.1 EER96652 AT1G78020.1 21798944
AT3G29160.1 EES14968 AT1G78020.1 21798944
AT3G29160.1 KXG30742 AT1G78020.1 21798944
AT3G29160.1 OQU76080 AT1G78020.1 21798944
AT3G29160.1 EER98550 AT2G23290.1 21798944
AT3G29160.1 EES12241 AT3G14180.1 21798944
AT3G29160.1 KXG30464 AT3G14180.1 21798944
AT3G29160.1 EER98873 AT3G17860.1 21798944
AT3G29160.1 EES15016 AT3G17860.1 21798944
AT3G29160.1 KXG37739 AT3G45240.1 19339507
AT3G29160.1 OQU82027 AT3G45240.1 19339507
AT3G29160.1 KXG26065 AT3G48530.1 10417704
AT3G29160.1 EES05120 AT3G48550.1 21798944
AT3G29160.1 EES12026 AT3G48550.1 21798944
AT3G29160.1 KXG40392 AT3G52180.1 12148529
AT3G29160.1 KXG39393 AT4G15730.1 21798944
AT3G29160.1 OQU77880 AT4G15730.1 21798944
AT3G29160.1 OQU90452 AT4G15730.1 21798944
AT3G29160.1 KXG25821 AT4G15900.1 10220464
AT3G29160.1 KXG37739 AT5G60550.1 19339507
AT3G29160.1 OQU82027 AT5G60550.1 19339507
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G353300.1 Wheat cytosol 91.07 91.8
TraesCS1B01G364800.1 Wheat cytosol 91.07 91.8
TraesCS1A01G350500.1 Wheat cytosol 91.07 91.25
Os05t0530500-02 Rice cytosol, plasma membrane 90.87 90.69
HORVU1Hr1G081310.4 Barley cytosol 90.87 88.08
EES01406 Sorghum cytosol 86.71 87.58
KRH01228 Soybean cytosol, nucleus 78.97 77.43
KRH44934 Soybean cytosol, endoplasmic reticulum, nucleus 77.98 77.06
GSMUA_AchrUn_... Banana cytosol, plasma membrane 69.84 76.86
VIT_14s0108g01230.t01 Wine grape cytosol 77.38 75.88
CDY37545 Canola cytosol 75.6 75.3
Bra039146.1-P Field mustard cytosol 75.4 75.1
CDY43267 Canola cytosol 75.4 75.1
CDY34697 Canola cytosol 75.79 74.76
CDY55800 Canola cytosol 75.79 74.76
KRH18445 Soybean cytosol, endoplasmic reticulum 76.19 74.56
CDY04058 Canola cytosol 73.81 73.23
KXG39612 Sorghum cytosol 74.4 73.1
Bra025379.1-P Field mustard cytosol 74.21 73.05
CDX86386 Canola cytosol 74.21 72.9
AT3G29160.1 Thale cress cytosol 74.01 72.85
CDX85250 Canola cytosol 74.01 72.85
CDY44405 Canola cytosol 74.01 72.71
AT3G01090.2 Thale cress cytosol 76.79 72.34
Bra033088.1-P Field mustard cytosol 69.64 71.49
CDX74283 Canola cytosol 70.83 71.26
Solyc03g115700.2.1 Tomato cytosol, nucleus 68.06 68.06
PGSC0003DMT400063153 Potato cytosol 67.66 67.66
GSMUA_Achr10P... Banana cytosol 77.98 63.39
Zm00001d010811_P002 Maize cytosol 81.15 55.2
Bra021482.1-P Field mustard cytosol 68.45 54.08
Zm00001d038745_P002 Maize cytosol 83.13 49.94
EES00612 Sorghum cytosol 33.93 36.93
OQU82814 Sorghum cytosol 31.55 36.14
EER97615 Sorghum cytosol 31.55 35.81
OQU77359 Sorghum cytosol, mitochondrion 32.34 35.36
KXG37001 Sorghum cytosol, mitochondrion 31.35 35.27
EER92350 Sorghum cytosol, mitochondrion 31.35 35.19
EER92947 Sorghum cytosol, plastid 30.95 34.9
EES16537 Sorghum cytosol 27.58 34.49
KXG32670 Sorghum cytosol 30.75 34.14
OQU88438 Sorghum cytosol, mitochondrion 29.17 34.11
EER90021 Sorghum cytosol 29.37 32.96
CDX91963 Canola plasma membrane 71.43 29.03
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.1.1MapMan:27.3.1.1Gene3D:3.30.310.80EntrezGene:8084441UniProt:C5Z1H4EnsemblPlants:EES19859
ProteinID:EES19859ProteinID:EES19859.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0005737GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538GO:GO:0035556InterPro:IPR000719InterPro:IPR001772InterPro:IPR015940InterPro:KA1/Ssp2_C
InterPro:KA1_domInterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF02149PIRSF:PIRSF000615ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PFscan:PS50030PFscan:PS50032PANTHER:PTHR24343PANTHER:PTHR24343:SF156
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3009G208100SUPFAM:SSF103243SUPFAM:SSF56112
unigene:Sbi.9253InterPro:Ser/Thr_kinase_ASInterPro:UBAUniParc:UPI0001A89162RefSeq:XP_002441429.1:
Description
hypothetical protein
Coordinates
chr9:-:55542817..55546687
Molecular Weight (calculated)
57619.1 Da
IEP (calculated)
8.365
GRAVY (calculated)
-0.250
Length
504 amino acids
Sequence
(BLAST)
001: MMEGTGRDAN PLSGYRIGKT LGIGSFGKVK IAEHILTGHK VAIKILNRRK IRSMEMEEKV KREIKILRLF MHPHIIRLYE VIDTPADIYV VMEYVKSGEL
101: FDYIVEKGRL HEEEARRFFQ QIISGVEYCH RNMVVHRDLK PENLLLDSKC NVKIADFGLS NVMRDGHFLK TSCGSPNYAA PEVISGKLYA GPEVDVWSCG
201: VILYALLCGT LPFDDENIPN LFKKIKGGIY TLPSHLSPSA RDLIPRMLVV DPMKRITIRE IREHVWFKIR LPRYLAVPPP DTAQQVKKLD EETLNDVIKM
301: GFDKNQLIES VQNRLQNEAT VAYYLLFDNR LRTTSGYLGS EFQESMDSSF SQVIAETPTS ATELRQHGFT ESPGSGLRQH FAAERKWALG LQSRAHPREI
401: ISEVLKALQE LNVYWKKIGH YNMKCRWSPG CLESMMHSSD GFSAESAIIE TDDLMAKSTP IVKFEIQLYK TRDEKYLLDL QRVSGPQLLF LDLCSAFLTQ
501: LRVL
Best Arabidopsis Sequence Match ( AT3G01090.3 )
(BLAST)
001: MDGSGTGSRS GVESILPNYK LGRTLGIGSF GRVKIAEHAL TGHKVAIKIL NRRKIKNMEM EEKVRREIKI LRLFMHPHII RLYEVIETPT DIYLVMEYVN
101: SGELFDYIVE KGRLQEDEAR NFFQQIISGV EYCHRNMVVH RDLKPENLLL DSKCNVKIAD FGLSNIMRDG HFLKTSCGSP NYAAPEVISG KLYAGPEVDV
201: WSCGVILYAL LCGTLPFDDE NIPNLFKKIK GGIYTLPSHL SPGARDLIPR MLVVDPMKRV TIPEIRQHPW FQAHLPRYLA VPPPDTVQQA KKIDEEILQE
301: VINMGFDRNH LIESLRNRTQ NDGTVTYYLI LDNRFRASSG YLGAEFQETM EGTPRMHPAE SVASPVSHRL PGLMEYQGVG LRSQYPVERK WALGLQSRAH
401: PREIMTEVLK ALQDLNVCWK KIGHYNMKCR WVPNSSADGM LSNSMHDNNY FGDESSIIEN EAAVKSPNVV KFEIQLYKTR DDKYLLDLQR VQGPQFLFLD
501: LCAAFLAQLR VL
Arabidopsis Description
KIN10SNF1-related protein kinase catalytic subunit alpha KIN10 [Source:UniProtKB/Swiss-Prot;Acc:Q38997]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.