Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G15730.1 | EER90511 | AT1G01630.1 | 21798944 |
| AT4G15730.1 | EES02002 | AT1G01630.1 | 21798944 |
| AT4G15730.1 | EES02004 | AT1G01630.1 | 21798944 |
| AT4G15730.1 | KXG32187 | AT4G02150.1 | 21798944 |
| AT4G15730.1 | KXG38234 | AT4G04950.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010490_P005 | Maize | nucleus | 84.91 | 85.09 |
| TraesCS1B01G246700.4 | Wheat | nucleus | 51.58 | 50.34 |
| TraesCS1D01G235200.1 | Wheat | nucleus | 51.51 | 49.93 |
| HORVU1Hr1G058250.1 | Barley | nucleus | 51.3 | 49.76 |
| TraesCS1A01G237200.3 | Wheat | nucleus | 51.16 | 49.42 |
| Os05t0371100-00 | Rice | cytosol | 4.35 | 42.47 |
| PGSC0003DMT400013673 | Potato | cytosol, plastid, vacuole | 4.63 | 41.25 |
| VIT_14s0128g00910.t01 | Wine grape | cytosol | 2.67 | 40.43 |
| PGSC0003DMT400029537 | Potato | mitochondrion | 1.4 | 35.09 |
| PGSC0003DMT400005780 | Potato | nucleus | 6.11 | 27.53 |
| PGSC0003DMT400039039 | Potato | nucleus | 6.18 | 27.41 |
| PGSC0003DMT400039034 | Potato | nucleus | 5.96 | 26.81 |
| GSMUA_Achr5P08000_001 | Banana | nucleus | 26.32 | 26.5 |
| PGSC0003DMT400005774 | Potato | cytosol | 1.68 | 26.09 |
| OQU90452 | Sorghum | nucleus | 29.19 | 26.03 |
| PGSC0003DMT400031270 | Potato | nucleus | 5.82 | 25.86 |
| KXG39393 | Sorghum | mitochondrion | 24.21 | 25.77 |
| Solyc08g067490.1.1 | Tomato | nucleus | 5.54 | 25.57 |
| Solyc12g017610.1.1 | Tomato | nucleus | 5.75 | 25.31 |
| Solyc08g067570.1.1 | Tomato | nucleus | 5.75 | 25.31 |
| GSMUA_Achr8P21920_001 | Banana | nucleus | 27.44 | 24.67 |
| GSMUA_Achr3P08980_001 | Banana | nucleus | 28.07 | 24.33 |
| Solyc08g067140.1.1 | Tomato | nucleus | 4.42 | 23.77 |
| AT3G62900.2 | Thale cress | nucleus | 22.95 | 23.31 |
| VIT_07s0104g01600.t01 | Wine grape | nucleus | 26.39 | 23.21 |
| CDX76670 | Canola | nucleus | 20.7 | 22.96 |
| CDY25123 | Canola | nucleus | 21.26 | 22.94 |
| CDY54298 | Canola | nucleus | 15.02 | 22.77 |
| Bra007709.1-P | Field mustard | nucleus | 20.7 | 22.74 |
| CDY11456 | Canola | nucleus | 20.63 | 22.67 |
| CDY66331 | Canola | nucleus | 14.88 | 22.65 |
| Bra033505.1-P | Field mustard | nucleus | 14.88 | 22.65 |
| PGSC0003DMT400065641 | Potato | nucleus | 2.95 | 22.58 |
| Solyc08g067590.1.1 | Tomato | nucleus | 1.89 | 22.5 |
| AT4G15730.1 | Thale cress | nucleus | 16.63 | 22.38 |
| Bra003514.1-P | Field mustard | nucleus | 20.7 | 22.33 |
| CDX67908 | Canola | nucleus | 20.49 | 22.31 |
| CDY18138 | Canola | nucleus | 14.32 | 21.43 |
| KRG96403 | Soybean | nucleus | 25.26 | 21.42 |
| CDX89924 | Canola | nucleus | 14.11 | 20.98 |
| KRH68140 | Soybean | nucleus | 24.56 | 20.95 |
| Solyc06g008720.2.1 | Tomato | nucleus | 18.46 | 20.68 |
| Solyc09g074670.2.1 | Tomato | nucleus | 23.65 | 20.33 |
| CDY37451 | Canola | nucleus | 14.46 | 19.86 |
| VIT_14s0128g00900.t01 | Wine grape | nucleus | 18.18 | 19.77 |
| Bra032575.1-P | Field mustard | nucleus | 9.54 | 19.4 |
| CDY32489 | Canola | nucleus | 14.53 | 19.26 |
| KRH37127 | Soybean | nucleus | 22.25 | 18.94 |
| Solyc01g067600.2.1 | Tomato | nucleus | 21.82 | 18.85 |
| KRH50884 | Soybean | nucleus | 21.12 | 18.72 |
| VIT_05s0020g01570.t01 | Wine grape | cytosol, mitochondrion, plastid | 21.33 | 18.67 |
| AT1G02990.4 | Thale cress | nucleus | 16.49 | 18.39 |
| KRH02231 | Soybean | nucleus | 20.77 | 18.22 |
| KRH12132 | Soybean | nucleus | 21.54 | 18.15 |
| PGSC0003DMT400005776 | Potato | nucleus | 3.23 | 17.83 |
| Bra033364.1-P | Field mustard | nucleus | 14.67 | 13.59 |
Protein Annotations
| EnsemblPlants:OQU77880 | EnsemblPlantsGene:SORBI_3009G116900 | Gene3D:3.30.40.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 |
| InterPro:IPR011124 | InterPro:Znf_CW | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF14 | PFAM:PF07496 | PFscan:PS51050 |
| ProteinID:KXG21855.1 | ProteinID:OQU77880 | ProteinID:OQU77880.1 | SEG:seg | UniParc:UPI00081AE019 | UniProt:A0A1B6P8M1 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:46022672..46041160
Molecular Weight (calculated)
155659.0 Da
IEP (calculated)
9.113
GRAVY (calculated)
-0.807
Length
1425 amino acids
Sequence
(BLAST)
(BLAST)
0001: MQGRRGEMGY EEGELELEEG EAASGGRELV VPDALTYIDE RIQNVLGHLR KKFEGEITHM NLGSMYGCHG SFLPTYPRSP LGFPQYRNTA DPKNHGSGSR
0101: SPYVPTENAQ KNHFVKTELD SSTKNDYCRI SHESDVNPSQ QMLNRAVNGS EQKAPKIRIK VNSNKSLPKN TAAIYSGLGL DISPSSSAED NLDETAGALV
0201: PEVLSDESPR TIFEIMTCHF IPGGRLLSPL TGNVLELRQK PKVMVKEEAP EFQVKAELHG NLGHTTSATL DNKDKCTEEI KSDENKDRTP NFKSSKSRGN
0301: KPSAVNKGTK PLQAVLDDTG SNFLPTIVKI QHSVEDSAKF IGGISDKMKG SKNSPSKGRE KNKNSKEEPS LDHGFSCNNR CGSDEYNDQP CAISSQMQNI
0401: PNKTSSLERD NGKVLHMEDE PSQYKSKENG VLFSADSIAV MVGNVDRNSL GVMNGKKKKV SSPQSAKKLK FKTKKQLNDN INRKSYGEDE DCALDHRIDL
0501: ANSYPTDKSV RLEKKTISSG EIGNKSDAGN DGGPNISAML DEKSDPLTLV YRNGTTESSA TLPAPEPILI NEQWVCCDKC ENWRLLPYGM NPDILPKKWR
0601: CSMQSWLPGM NSCKITEDET TRALRALYMV PAPENSIKDG GHDNAMSGIG APIAPTFQGN KQSISSLGKL KGSLDGANVA NTLDSAGMSK PSKKLHAPSS
0701: RNFPKLKEKR KLVESSDKGE IIGKDQSHRM RSSVGVDHDN MRASKKIKKE SNGPVMKHQP SEFEISKCSP ASEILKNIEK RSGISPGMGK YGLSSSGKHS
0801: HGEDKGFSDV VIKTSDTENS GPRDSSIKKR KLKQRQSNQH NMDPHCSNTD TNGITKQNIS ETNAVKKKTR SELKLSKTDR TATDSRVAGV DDSISTDKEC
0901: LSEQLQENTH FQHPSLSEGT TKRKIGHAQT STAATSSTSK MSNSHKYKAG FQEMRASPVE SVSSSPLRSS DKNPLGRHRS SSWTVTENVQ SQESVKKGSS
1001: CSNRNYDLGS DCDKAKARIS GCFNGDVGHH VQKDRDLLKD KQDVINACLI NKGSGLGIRN VQLNPEHKVN PDVLSSHDNH GHKQPTGRQI GKTPPHFGSN
1101: KGDHANLTYG NVKPDNGNIP HKDQKTNPSA VKGSKQQPSL NNASNGDASY KAKQIEKAVI ENLETRKQVT LNGDASNLTS ASVLLKEARD LKHLSKRLKE
1201: KGDDFESTSM CFEAGLKFLH VASLCEAPNV DSSKQGDSVQ AMKLYSETGN LCGFCAHEFE RLKKMANAAL AYKCVEVAYM KAAFFKSPGV IKDRHALQAA
1301: SLMVAPAESP SSSASDIDNL NNQSTVTKAV SARGVYSPQI ASNPISRNNH HLMGLLSYTE DINNAFEGTR KSQSSFSAYL SGIGKTQVDG VVLVREVLDF
1401: SFHNVKGLLQ LIRHSLESIN HESGK
0101: SPYVPTENAQ KNHFVKTELD SSTKNDYCRI SHESDVNPSQ QMLNRAVNGS EQKAPKIRIK VNSNKSLPKN TAAIYSGLGL DISPSSSAED NLDETAGALV
0201: PEVLSDESPR TIFEIMTCHF IPGGRLLSPL TGNVLELRQK PKVMVKEEAP EFQVKAELHG NLGHTTSATL DNKDKCTEEI KSDENKDRTP NFKSSKSRGN
0301: KPSAVNKGTK PLQAVLDDTG SNFLPTIVKI QHSVEDSAKF IGGISDKMKG SKNSPSKGRE KNKNSKEEPS LDHGFSCNNR CGSDEYNDQP CAISSQMQNI
0401: PNKTSSLERD NGKVLHMEDE PSQYKSKENG VLFSADSIAV MVGNVDRNSL GVMNGKKKKV SSPQSAKKLK FKTKKQLNDN INRKSYGEDE DCALDHRIDL
0501: ANSYPTDKSV RLEKKTISSG EIGNKSDAGN DGGPNISAML DEKSDPLTLV YRNGTTESSA TLPAPEPILI NEQWVCCDKC ENWRLLPYGM NPDILPKKWR
0601: CSMQSWLPGM NSCKITEDET TRALRALYMV PAPENSIKDG GHDNAMSGIG APIAPTFQGN KQSISSLGKL KGSLDGANVA NTLDSAGMSK PSKKLHAPSS
0701: RNFPKLKEKR KLVESSDKGE IIGKDQSHRM RSSVGVDHDN MRASKKIKKE SNGPVMKHQP SEFEISKCSP ASEILKNIEK RSGISPGMGK YGLSSSGKHS
0801: HGEDKGFSDV VIKTSDTENS GPRDSSIKKR KLKQRQSNQH NMDPHCSNTD TNGITKQNIS ETNAVKKKTR SELKLSKTDR TATDSRVAGV DDSISTDKEC
0901: LSEQLQENTH FQHPSLSEGT TKRKIGHAQT STAATSSTSK MSNSHKYKAG FQEMRASPVE SVSSSPLRSS DKNPLGRHRS SSWTVTENVQ SQESVKKGSS
1001: CSNRNYDLGS DCDKAKARIS GCFNGDVGHH VQKDRDLLKD KQDVINACLI NKGSGLGIRN VQLNPEHKVN PDVLSSHDNH GHKQPTGRQI GKTPPHFGSN
1101: KGDHANLTYG NVKPDNGNIP HKDQKTNPSA VKGSKQQPSL NNASNGDASY KAKQIEKAVI ENLETRKQVT LNGDASNLTS ASVLLKEARD LKHLSKRLKE
1201: KGDDFESTSM CFEAGLKFLH VASLCEAPNV DSSKQGDSVQ AMKLYSETGN LCGFCAHEFE RLKKMANAAL AYKCVEVAYM KAAFFKSPGV IKDRHALQAA
1301: SLMVAPAESP SSSASDIDNL NNQSTVTKAV SARGVYSPQI ASNPISRNNH HLMGLLSYTE DINNAFEGTR KSQSSFSAYL SGIGKTQVDG VVLVREVLDF
1401: SFHNVKGLLQ LIRHSLESIN HESGK
0001: MEESELEEGE ACSYNITNEY AGSIDPDNDL SYIDEKLQHI LGHFQKDFEG GVSAENLGAK YGGYGSFLPT YQRSPVWSHP KTPAKPQSST GTRSPNNLLG
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
Arabidopsis Description
CW-type Zinc Finger [Source:UniProtKB/TrEMBL;Acc:F4IZK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.