Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRH20463 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G15730.1 | KRH20463 | AT4G04950.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH02231 | Soybean | nucleus | 70.9 | 70.15 |
| KRH12132 | Soybean | nucleus | 46.21 | 43.94 |
| KRH37127 | Soybean | nucleus | 43.47 | 41.76 |
| PGSC0003DMT400005774 | Potato | cytosol | 1.8 | 31.52 |
| PGSC0003DMT400039034 | Potato | nucleus | 5.91 | 29.97 |
| PGSC0003DMT400039039 | Potato | nucleus | 5.85 | 29.28 |
| PGSC0003DMT400031270 | Potato | nucleus | 5.85 | 29.28 |
| CDY66331 | Canola | nucleus | 16.98 | 29.17 |
| PGSC0003DMT400005780 | Potato | nucleus | 5.72 | 29.11 |
| Bra033505.1-P | Field mustard | nucleus | 16.92 | 29.06 |
| Os05t0371100-00 | Rice | cytosol | 2.61 | 28.77 |
| Solyc08g067570.1.1 | Tomato | nucleus | 5.78 | 28.7 |
| CDY54298 | Canola | nucleus | 16.73 | 28.62 |
| Solyc12g017610.1.1 | Tomato | nucleus | 5.72 | 28.4 |
| VIT_05s0020g01570.t01 | Wine grape | cytosol, mitochondrion, plastid | 28.42 | 28.07 |
| AT4G15730.1 | Thale cress | nucleus | 18.47 | 28.05 |
| Solyc08g067490.1.1 | Tomato | nucleus | 5.22 | 27.18 |
| Os03t0347300-01 | Rice | cytosol, nucleus | 14.99 | 26.0 |
| GSMUA_Achr5P08000_001 | Banana | nucleus | 22.82 | 25.94 |
| KRG96403 | Soybean | nucleus | 27.05 | 25.88 |
| KRH68140 | Soybean | nucleus | 26.68 | 25.67 |
| Solyc01g067600.2.1 | Tomato | nucleus | 26.0 | 25.33 |
| Solyc08g067140.1.1 | Tomato | nucleus | 4.04 | 24.53 |
| KXG39393 | Sorghum | mitochondrion | 20.27 | 24.35 |
| Solyc08g067590.1.1 | Tomato | nucleus | 1.8 | 24.17 |
| GSMUA_Achr3P08980_001 | Banana | nucleus | 24.5 | 23.97 |
| PGSC0003DMT400065641 | Potato | nucleus | 2.74 | 23.66 |
| OQU90452 | Sorghum | nucleus | 23.07 | 23.22 |
| Zm00001d029134_P004 | Maize | mitochondrion | 19.59 | 23.08 |
| TraesCS2A01G116600.1 | Wheat | nucleus | 22.64 | 23.02 |
| TraesCS2D01G118500.1 | Wheat | nucleus | 22.45 | 22.85 |
| TraesCS2B01G135800.1 | Wheat | nucleus | 22.45 | 22.83 |
| Zm00001d022481_P019 | Maize | nucleus | 22.57 | 22.79 |
| Zm00001d007121_P024 | Maize | nucleus | 21.95 | 22.17 |
| GSMUA_Achr8P21920_001 | Banana | nucleus | 21.58 | 21.89 |
| PGSC0003DMT400005776 | Potato | nucleus | 3.48 | 21.71 |
| TraesCS1B01G246700.4 | Wheat | nucleus | 19.47 | 21.44 |
| Os07t0669800-01 | Rice | nucleus | 13.87 | 21.28 |
| TraesCS1D01G235200.1 | Wheat | nucleus | 19.34 | 21.16 |
| OQU77880 | Sorghum | nucleus | 18.72 | 21.12 |
| TraesCS1A01G237200.3 | Wheat | nucleus | 19.15 | 20.88 |
| HORVU1Hr1G058250.1 | Barley | nucleus | 18.78 | 20.56 |
| Zm00001d010490_P005 | Maize | nucleus | 17.85 | 20.18 |
Protein Annotations
| EMBL:ACUP02004716 | EnsemblPlants:KRH50884 | EnsemblPlantsGene:GLYMA_07G249600 | EntrezGene:100810441 | Gene3D:3.30.40.100 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0008270 | InterPro:IPR011124 | InterPro:Znf_CW | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF14 |
| PFAM:PF07496 | PFscan:PS51050 | ProteinID:KRH50884 | ProteinID:KRH50884.1 | SEG:seg | UniParc:UPI00029627A7 |
| UniProt:K7L3Q3 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:42752785..42761700
Molecular Weight (calculated)
178701.0 Da
IEP (calculated)
8.658
GRAVY (calculated)
-0.816
Length
1608 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEANTEFEEG EAFFCYKDDD DDNIDLDSLS YIDERIQHAL GHFRKEFEEG ISADRLGAKF GDYGSFLPTC ERSPPLRSCP KTPQKHSSSP KSPSNLHMVA
0101: AFQNSKAPPN IPPSMRLGTA SYKAPPFRNI RVPSADNSVK NTDISSNEVI EKFTLKDCAN KSENLTDQRT LKLRIKVKSD ILAKKKAVIY SGLGLDDSPS
0201: SSMENSHEES EDMPHVSQET PEESPTSIVQ VMISFTIPGG VLISPLHDSL LYLIRKEKAH GNIKPMYSLN GHQEHYSMST DESDSFVGDG HLLKKRKVTV
0301: VDQSDKQHMN GNHSENDMTL HTKKKLRSRT LNRKDFLSND LRCTPLSSSI CDAGETDEVT VKAFEVSKEV DKDGVKCRMV STEAVKEDTL ESISGQDFDK
0401: IEKQNTGSSF MQKVLEHKTE IFQNNNSTDP KINSKCNAFA ISKRIKCDTM KCKVDQDTQK CETNQEGKVK SESKNESKGE RSPGKVMTDA EKDSIGTSNN
0501: AMVNDRKSTG IGVTSSKSKM HKIKSMKDNK VTDCDRDSLK GKKSQRKVDR INPTDRPTLN KATVNSILDH VYKSAYIVKE RPSGNKVVNQ LSAGPCVKDA
0601: PGAFSIAENK PTSEIVPSSA AATPQVIEED WVCCDSCQKW RLLPMGLKPE QLPEKWLCSM LYWLPGMNRC NISEEETTKT LYASYQMPIF VGQNNMQNCA
0701: TGPETEVRSV DALQLGLNHK KSSSDVMLDR GKKKHGINEK ARSVINNDIG PADSNRMKKS ISKHSSRLNN LIEEKNTPKV KEKQMNGGDR NHFRLKHKME
0801: DNQHGSGTAK KSKTEDVYYA DKQLNPSMEF KKVGLNSRNG LPTKASGKNM GKYDDYCWSD DLEDKLVVPV KKGDWAQFSS DDGSLDATNS SKIGSIKKRK
0901: MTDWLDSEKH NKTLSLEGDM KCGKEGNVNR REKKYIVLNM DAKSVTERDD KLVRESGVKR VFSSDSRDEM AIGTEVKSVN KVQQPRKHKK NVASYQALDC
1001: FDQLGKDLGS GELSLTATSS SSKVSGSHKA RTNLEDVRGS PVESVTSSPL WTSNMDKRIL AAGDTSEKDD ARKRGLSKSL DNREGKLSVK MKERISYDIH
1101: PAHGNCGSGS HLEEKMNKSN KENALSWQKS GKVTSLRVKE KDRISGSEVI RDKMKVSASD NDFYKNDVSY ESRVDPNHHA SGTETRNDVK NSSLKSNHKI
1201: VDPSKKNSSR HWSNEAGKQT VQKQNEIGNP VLKVDATRST NRKIISQQNL IQNFVEENIA NQVCTGSRDG KAKVIASSED KVKRETLYVG SRTAPESQKG
1301: DMSNGHPVHA SGNDVPKFAR NPIDVCCKVG VNCSSESFIP DGQLSESGPV TTNSSQTASS ILEEATKLKD SADHYKNSGF EFESNETYFK AALKFLHGAS
1401: LLESSHSESS KHGETSQMQI YATTAKLFES CAHKYEKCQE MAAAALAYKC MEVVYMRLVY CKHSSINRDR HELQLTLQMV SQGESPSSSA SDIDNLNNLA
1501: VVDKVTMTRG SNTHVANNQV ISAQNRPNIV RLLDFTQDIN LAMEASRKCK STYRAANLNM EGARNRNDCI TSIRKVVDFS FQDVDELVHL VLTAMKAITR
1601: AGLGGVRD
0101: AFQNSKAPPN IPPSMRLGTA SYKAPPFRNI RVPSADNSVK NTDISSNEVI EKFTLKDCAN KSENLTDQRT LKLRIKVKSD ILAKKKAVIY SGLGLDDSPS
0201: SSMENSHEES EDMPHVSQET PEESPTSIVQ VMISFTIPGG VLISPLHDSL LYLIRKEKAH GNIKPMYSLN GHQEHYSMST DESDSFVGDG HLLKKRKVTV
0301: VDQSDKQHMN GNHSENDMTL HTKKKLRSRT LNRKDFLSND LRCTPLSSSI CDAGETDEVT VKAFEVSKEV DKDGVKCRMV STEAVKEDTL ESISGQDFDK
0401: IEKQNTGSSF MQKVLEHKTE IFQNNNSTDP KINSKCNAFA ISKRIKCDTM KCKVDQDTQK CETNQEGKVK SESKNESKGE RSPGKVMTDA EKDSIGTSNN
0501: AMVNDRKSTG IGVTSSKSKM HKIKSMKDNK VTDCDRDSLK GKKSQRKVDR INPTDRPTLN KATVNSILDH VYKSAYIVKE RPSGNKVVNQ LSAGPCVKDA
0601: PGAFSIAENK PTSEIVPSSA AATPQVIEED WVCCDSCQKW RLLPMGLKPE QLPEKWLCSM LYWLPGMNRC NISEEETTKT LYASYQMPIF VGQNNMQNCA
0701: TGPETEVRSV DALQLGLNHK KSSSDVMLDR GKKKHGINEK ARSVINNDIG PADSNRMKKS ISKHSSRLNN LIEEKNTPKV KEKQMNGGDR NHFRLKHKME
0801: DNQHGSGTAK KSKTEDVYYA DKQLNPSMEF KKVGLNSRNG LPTKASGKNM GKYDDYCWSD DLEDKLVVPV KKGDWAQFSS DDGSLDATNS SKIGSIKKRK
0901: MTDWLDSEKH NKTLSLEGDM KCGKEGNVNR REKKYIVLNM DAKSVTERDD KLVRESGVKR VFSSDSRDEM AIGTEVKSVN KVQQPRKHKK NVASYQALDC
1001: FDQLGKDLGS GELSLTATSS SSKVSGSHKA RTNLEDVRGS PVESVTSSPL WTSNMDKRIL AAGDTSEKDD ARKRGLSKSL DNREGKLSVK MKERISYDIH
1101: PAHGNCGSGS HLEEKMNKSN KENALSWQKS GKVTSLRVKE KDRISGSEVI RDKMKVSASD NDFYKNDVSY ESRVDPNHHA SGTETRNDVK NSSLKSNHKI
1201: VDPSKKNSSR HWSNEAGKQT VQKQNEIGNP VLKVDATRST NRKIISQQNL IQNFVEENIA NQVCTGSRDG KAKVIASSED KVKRETLYVG SRTAPESQKG
1301: DMSNGHPVHA SGNDVPKFAR NPIDVCCKVG VNCSSESFIP DGQLSESGPV TTNSSQTASS ILEEATKLKD SADHYKNSGF EFESNETYFK AALKFLHGAS
1401: LLESSHSESS KHGETSQMQI YATTAKLFES CAHKYEKCQE MAAAALAYKC MEVVYMRLVY CKHSSINRDR HELQLTLQMV SQGESPSSSA SDIDNLNNLA
1501: VVDKVTMTRG SNTHVANNQV ISAQNRPNIV RLLDFTQDIN LAMEASRKCK STYRAANLNM EGARNRNDCI TSIRKVVDFS FQDVDELVHL VLTAMKAITR
1601: AGLGGVRD
0001: MEESELEEGE ACSYNITNEY AGSIDPDNDL SYIDEKLQHI LGHFQKDFEG GVSAENLGAK YGGYGSFLPT YQRSPVWSHP KTPAKPQSST GTRSPNNLLG
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
Arabidopsis Description
CW-type Zinc Finger [Source:UniProtKB/TrEMBL;Acc:F4IZK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.