Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G15730.1 | EER90511 | AT1G01630.1 | 21798944 |
| AT4G15730.1 | EES02002 | AT1G01630.1 | 21798944 |
| AT4G15730.1 | EES02004 | AT1G01630.1 | 21798944 |
| AT4G15730.1 | KXG32187 | AT4G02150.1 | 21798944 |
| AT4G15730.1 | KXG38234 | AT4G04950.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d022481_P019 | Maize | nucleus | 89.3 | 89.58 |
| TraesCS2D01G118500.1 | Wheat | nucleus | 63.89 | 64.62 |
| TraesCS2B01G135800.1 | Wheat | nucleus | 63.89 | 64.58 |
| TraesCS2A01G116600.1 | Wheat | nucleus | 63.89 | 64.58 |
| Os07t0669800-01 | Rice | nucleus | 42.3 | 64.5 |
| VIT_14s0128g00910.t01 | Wine grape | cytosol | 3.25 | 55.32 |
| PGSC0003DMT400029537 | Potato | mitochondrion | 1.81 | 50.88 |
| PGSC0003DMT400013673 | Potato | cytosol, plastid, vacuole | 4.51 | 45.0 |
| KXG39393 | Sorghum | mitochondrion | 36.55 | 43.61 |
| PGSC0003DMT400005774 | Potato | cytosol | 2.13 | 36.96 |
| GSMUA_Achr5P08000_001 | Banana | nucleus | 29.41 | 33.22 |
| PGSC0003DMT400039034 | Potato | nucleus | 6.32 | 31.86 |
| GSMUA_Achr8P21920_001 | Banana | nucleus | 31.6 | 31.86 |
| PGSC0003DMT400005780 | Potato | nucleus | 6.2 | 31.33 |
| PGSC0003DMT400031270 | Potato | nucleus | 6.26 | 31.15 |
| PGSC0003DMT400039039 | Potato | nucleus | 6.13 | 30.53 |
| GSMUA_Achr3P08980_001 | Banana | nucleus | 31.35 | 30.47 |
| Solyc12g017610.1.1 | Tomato | nucleus | 6.13 | 30.25 |
| Solyc08g067570.1.1 | Tomato | nucleus | 6.13 | 30.25 |
| VIT_07s0104g01600.t01 | Wine grape | nucleus | 29.91 | 29.51 |
| OQU77880 | Sorghum | nucleus | 26.03 | 29.19 |
| Solyc08g067490.1.1 | Tomato | nucleus | 5.51 | 28.48 |
| CDY37451 | Canola | nucleus | 17.96 | 27.68 |
| Solyc08g067140.1.1 | Tomato | nucleus | 4.57 | 27.55 |
| CDX89924 | Canola | nucleus | 16.46 | 27.45 |
| CDY18138 | Canola | nucleus | 16.27 | 27.31 |
| Bra007709.1-P | Field mustard | nucleus | 21.78 | 26.83 |
| CDY11456 | Canola | nucleus | 21.71 | 26.75 |
| CDX76670 | Canola | nucleus | 21.4 | 26.61 |
| CDY66331 | Canola | nucleus | 15.58 | 26.6 |
| CDY54298 | Canola | nucleus | 15.64 | 26.6 |
| Bra033505.1-P | Field mustard | nucleus | 15.46 | 26.39 |
| PGSC0003DMT400065641 | Potato | nucleus | 3.07 | 26.34 |
| AT3G62900.2 | Thale cress | nucleus | 22.97 | 26.16 |
| CDX67908 | Canola | nucleus | 21.4 | 26.13 |
| KRG96403 | Soybean | nucleus | 27.47 | 26.12 |
| Bra003514.1-P | Field mustard | nucleus | 21.46 | 25.97 |
| KRH68140 | Soybean | nucleus | 27.03 | 25.85 |
| Solyc06g008720.2.1 | Tomato | nucleus | 20.53 | 25.79 |
| CDY32489 | Canola | nucleus | 17.33 | 25.77 |
| CDY25123 | Canola | nucleus | 21.15 | 25.59 |
| Solyc08g067590.1.1 | Tomato | nucleus | 1.88 | 25.0 |
| Solyc09g074670.2.1 | Tomato | nucleus | 25.72 | 24.79 |
| Bra032575.1-P | Field mustard | nucleus | 10.83 | 24.68 |
| AT4G15730.1 | Thale cress | nucleus | 16.27 | 24.55 |
| Solyc01g067600.2.1 | Tomato | nucleus | 24.84 | 24.06 |
| VIT_14s0128g00900.t01 | Wine grape | nucleus | 19.71 | 24.05 |
| PGSC0003DMT400005776 | Potato | nucleus | 3.88 | 24.03 |
| KRH37127 | Soybean | nucleus | 24.78 | 23.66 |
| VIT_05s0020g01570.t01 | Wine grape | cytosol, mitochondrion, plastid | 24.09 | 23.65 |
| KRH12132 | Soybean | nucleus | 24.59 | 23.24 |
| KRH50884 | Soybean | nucleus | 23.22 | 23.07 |
| AT1G02990.4 | Thale cress | nucleus | 18.4 | 23.0 |
| KRH02231 | Soybean | nucleus | 23.28 | 22.89 |
| Bra033364.1-P | Field mustard | nucleus | 16.27 | 16.91 |
Protein Annotations
| EnsemblPlants:OQU90452 | EnsemblPlantsGene:SORBI_3002G411600 | Gene3D:3.30.40.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 |
| InterPro:IPR011124 | InterPro:Znf_CW | ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF14 | PFAM:PF07496 |
| PFscan:PS51050 | ProteinID:OQU90452 | ProteinID:OQU90452.1 | SEG:seg | UniParc:UPI0009DC895A | UniProt:A0A1W0W7U9 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:75994203..76005573
Molecular Weight (calculated)
174382.0 Da
IEP (calculated)
8.899
GRAVY (calculated)
-0.898
Length
1598 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLSVRRRQED AGVRVAAAAP AQQPRGGLGM DDDAELEEGE ACGDDTAFVD PDVALSYIDE KLQDVLGHFQ KDFEGGVSAE NLGSKFGGYG SFLPTYQRSP
0101: LPQTRSPPKA ANVTSKSPFH QSSEGMSQKP PAVAVSSTPQ SNGPMVPFSG DSIKKEIRQT TKAERGSVSH DSYGPSKSSD QNRLKVRIKV GSDNVLARNN
0201: AAIYSGLGLD ISSPSSIEDS PDGCGSLSPE VNNVPHESPQ TILQIMTCFS VPGGFLLSPL PANILQLTKK VVASSKKWES NVDIENVQEP YEGHVAKKVK
0301: SDGKKKKVID AKNSKNRNDI GAVMRKEIDI ETVAGQKIVS EALNISLLSD PRAMDAKGEN RLEEVPAENN FGGTRDARLK ERSTKTDSMT IKAEPVKAEA
0401: TECLENSSFG SSEMDLSAVK WEPKPKTEKG ETTLEERNTT NDKDLISGRK QEKKIKPESK CDASNFEGSN VINERAPAVS RSMEKVSGKE TLPYDTNGEN
0501: NSKSEVKKMQ REQKTNVLTS SDFLEDEKHI HSSAAVKERK SDMQSKSSHT VKKPKAKSHR GVRDNLPEGS YGSKEQDTLE NGSGFGDTRP KEKPWKYDSE
0601: RDSDAPGISR REISSSVKHD KHLASEEQKM HIPPPVTVST ANAAPTHAAP VVIEEHWVSC DICDKWRLLP YEMNPSNLPK KWKCSMLYWL PGMNRCEISE
0701: EETTNALNAL YVPAPANGIP AVGHPHVASS GLVTSNIPNM NGHIEQNRKR KNVLSDGNFV AEGSHQTQGS GHPMSNQHAL SKSKTYTDGI QYPIERDSVS
0801: KSVDPTTEKK RSKSKHHSSY SDGGDLVDRS KKHSKVKSKR DLDRDEYKAS KKIRKEERRH FDRDRNLGSD LASGDVPDEA KALPVKSATK GSGERSDLSS
0901: SKQKSISRHN RLENSKKARQ DDVVVPEDES KEYFHQSDVQ RSDLSSKKRI VKEWEESQYN PIAHVSKGAI KETYRDQNLK EAKLKSLNSE ELFSMTSSKP
1001: PKGQHADQVL SHDGGRMNSE LVEDNTLFSA KRGLPEQEKS LSDQALDFGE PASDVAYIQT SAVTSSSSKA SVSQKKKQTT QAMKTSPIEP LSSSPQRNSN
1101: IDKVSVSHNR ISGKDGSLNA NSTTVPSMAK QLNTEVGVAG NDQRSSEPVL VGSSRRKSDR DNGQVQLTQG HASDGIHLER GLNEDLQPET GRKDSNVKSS
1201: HIPKGSHHLH SGEKNNYNTD GSPMQPGKHP VDPKTSALDK GVSSMHENTK STNSLQDRNG STHCPPDGNP PLGLPSGKEK SYLKSNKQDS QKPKPQVVCS
1301: PQKESKLDSH STPLKPNGSK LTPQSRQYNA ENGGRHGTAK HAIPSPADTS SPATKDNTST AYALKEARDL KHKANRLKGE GKELESTRLY FEAALKFLHV
1401: ASLLEPPSFD GFKQGDAAQS MYSDTAKLCN FVGHAYEKCK KMAAAALAYK CVEVAYLKAA YYKHPTASKD RQVLQAVVQT APGESPSSSA SDIDNLNNNG
1501: LSKGSSSKDA NSPQVAGNHL LLASRNQPHL MRLLAYTNDV NSAFEATRKS QMAIASAAAN HENGDDGLSS VKTVLDFNFR SVNDLLRLVR ISMEAISC
0101: LPQTRSPPKA ANVTSKSPFH QSSEGMSQKP PAVAVSSTPQ SNGPMVPFSG DSIKKEIRQT TKAERGSVSH DSYGPSKSSD QNRLKVRIKV GSDNVLARNN
0201: AAIYSGLGLD ISSPSSIEDS PDGCGSLSPE VNNVPHESPQ TILQIMTCFS VPGGFLLSPL PANILQLTKK VVASSKKWES NVDIENVQEP YEGHVAKKVK
0301: SDGKKKKVID AKNSKNRNDI GAVMRKEIDI ETVAGQKIVS EALNISLLSD PRAMDAKGEN RLEEVPAENN FGGTRDARLK ERSTKTDSMT IKAEPVKAEA
0401: TECLENSSFG SSEMDLSAVK WEPKPKTEKG ETTLEERNTT NDKDLISGRK QEKKIKPESK CDASNFEGSN VINERAPAVS RSMEKVSGKE TLPYDTNGEN
0501: NSKSEVKKMQ REQKTNVLTS SDFLEDEKHI HSSAAVKERK SDMQSKSSHT VKKPKAKSHR GVRDNLPEGS YGSKEQDTLE NGSGFGDTRP KEKPWKYDSE
0601: RDSDAPGISR REISSSVKHD KHLASEEQKM HIPPPVTVST ANAAPTHAAP VVIEEHWVSC DICDKWRLLP YEMNPSNLPK KWKCSMLYWL PGMNRCEISE
0701: EETTNALNAL YVPAPANGIP AVGHPHVASS GLVTSNIPNM NGHIEQNRKR KNVLSDGNFV AEGSHQTQGS GHPMSNQHAL SKSKTYTDGI QYPIERDSVS
0801: KSVDPTTEKK RSKSKHHSSY SDGGDLVDRS KKHSKVKSKR DLDRDEYKAS KKIRKEERRH FDRDRNLGSD LASGDVPDEA KALPVKSATK GSGERSDLSS
0901: SKQKSISRHN RLENSKKARQ DDVVVPEDES KEYFHQSDVQ RSDLSSKKRI VKEWEESQYN PIAHVSKGAI KETYRDQNLK EAKLKSLNSE ELFSMTSSKP
1001: PKGQHADQVL SHDGGRMNSE LVEDNTLFSA KRGLPEQEKS LSDQALDFGE PASDVAYIQT SAVTSSSSKA SVSQKKKQTT QAMKTSPIEP LSSSPQRNSN
1101: IDKVSVSHNR ISGKDGSLNA NSTTVPSMAK QLNTEVGVAG NDQRSSEPVL VGSSRRKSDR DNGQVQLTQG HASDGIHLER GLNEDLQPET GRKDSNVKSS
1201: HIPKGSHHLH SGEKNNYNTD GSPMQPGKHP VDPKTSALDK GVSSMHENTK STNSLQDRNG STHCPPDGNP PLGLPSGKEK SYLKSNKQDS QKPKPQVVCS
1301: PQKESKLDSH STPLKPNGSK LTPQSRQYNA ENGGRHGTAK HAIPSPADTS SPATKDNTST AYALKEARDL KHKANRLKGE GKELESTRLY FEAALKFLHV
1401: ASLLEPPSFD GFKQGDAAQS MYSDTAKLCN FVGHAYEKCK KMAAAALAYK CVEVAYLKAA YYKHPTASKD RQVLQAVVQT APGESPSSSA SDIDNLNNNG
1501: LSKGSSSKDA NSPQVAGNHL LLASRNQPHL MRLLAYTNDV NSAFEATRKS QMAIASAAAN HENGDDGLSS VKTVLDFNFR SVNDLLRLVR ISMEAISC
0001: MEESELEEGE ACSYNITNEY AGSIDPDNDL SYIDEKLQHI LGHFQKDFEG GVSAENLGAK YGGYGSFLPT YQRSPVWSHP KTPAKPQSST GTRSPNNLLG
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
Arabidopsis Description
CW-type Zinc Finger [Source:UniProtKB/TrEMBL;Acc:F4IZK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.