Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67908 | Canola | nucleus | 95.31 | 96.18 |
| Bra007709.1-P | Field mustard | nucleus | 64.65 | 65.84 |
| AT3G62900.2 | Thale cress | nucleus | 65.33 | 61.51 |
| PGSC0003DMT400013673 | Potato | cytosol, plastid, vacuole | 7.34 | 60.62 |
| PGSC0003DMT400029537 | Potato | mitochondrion | 1.97 | 45.61 |
| Os05t0371100-00 | Rice | cytosol | 3.86 | 34.93 |
| VIT_07s0104g01600.t01 | Wine grape | nucleus | 38.15 | 31.11 |
| Bra032575.1-P | Field mustard | nucleus | 15.52 | 29.24 |
| KRH68140 | Soybean | nucleus | 35.43 | 28.01 |
| KRG96403 | Soybean | nucleus | 35.05 | 27.54 |
| Solyc09g074670.2.1 | Tomato | nucleus | 31.79 | 25.33 |
| Solyc06g008720.2.1 | Tomato | nucleus | 24.0 | 24.92 |
| Bra033505.1-P | Field mustard | nucleus | 17.64 | 24.89 |
| GSMUA_Achr5P08000_001 | Banana | nucleus | 26.12 | 24.38 |
| KXG39393 | Sorghum | mitochondrion | 24.0 | 23.67 |
| Os03t0347300-01 | Rice | cytosol, nucleus | 16.43 | 23.41 |
| GSMUA_Achr8P21920_001 | Banana | nucleus | 27.71 | 23.09 |
| Zm00001d029134_P004 | Maize | mitochondrion | 23.01 | 22.27 |
| TraesCS1B01G246700.4 | Wheat | nucleus | 24.6 | 22.26 |
| TraesCS1D01G235200.1 | Wheat | nucleus | 24.53 | 22.04 |
| GSMUA_Achr3P08980_001 | Banana | nucleus | 27.33 | 21.96 |
| Zm00001d022481_P019 | Maize | nucleus | 26.27 | 21.78 |
| TraesCS1A01G237200.3 | Wheat | nucleus | 24.3 | 21.76 |
| TraesCS2A01G116600.1 | Wheat | nucleus | 25.97 | 21.7 |
| TraesCS2B01G135800.1 | Wheat | nucleus | 25.97 | 21.7 |
| TraesCS2D01G118500.1 | Wheat | nucleus | 25.89 | 21.65 |
| Zm00001d007121_P024 | Maize | nucleus | 26.04 | 21.61 |
| OQU90452 | Sorghum | nucleus | 25.97 | 21.46 |
| HORVU1Hr1G058250.1 | Barley | nucleus | 23.85 | 21.44 |
| Os07t0669800-01 | Rice | nucleus | 16.73 | 21.09 |
| Zm00001d010490_P005 | Maize | nucleus | 22.56 | 20.96 |
| OQU77880 | Sorghum | nucleus | 22.33 | 20.7 |
| Bra033364.1-P | Field mustard | nucleus | 18.62 | 15.99 |
Protein Annotations
| EnsemblPlants:Bra003514.1 | EnsemblPlants:Bra003514.1-P | EnsemblPlantsGene:Bra003514 | Gene3D:3.30.40.100 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0008270 | InterPro:IPR011124 | InterPro:Znf_CW | ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF14 |
| PFAM:PF07496 | PFscan:PS51050 | SEG:seg | UniParc:UPI0002541954 | UniProt:M4CH31 | MapMan:35.2 |
Description
AT3G62900 (E=0.0) | zinc ion binding
Coordinates
chrA07:-:13538455..13543639
Molecular Weight (calculated)
144352.0 Da
IEP (calculated)
9.701
GRAVY (calculated)
-0.989
Length
1321 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEESELEEGE ACSYNLTNDF GSSFDPDNDL SYIDHKLQNI LGHFQKDFEG DFSAENLGAK FGGYGSFLPT YQRSPLWSYP KAPAKPQSSA GTRSPNILPG
0101: ESQSGNAASS SLPKKANSEL ASSRIPKKSM KSKKPNSSSR HESATEKPGV FSKQNSLKLR IKMGADSLPA EKNAAAIYSG LGLDVSPNSV SGSEAMSGEP
0201: QGYSPLESPA NILNVMTSLP VDPCQLLSPL SNDLIRFIER EKPEKGYKRT SPSRLFIESS SAMANRLEPQ KGGEDPSVEK KRKMLERNNL SADTNVRSKK
0301: GLLDGNDGSV KKPTETNTSY PSATEKETAS SKLFDASKET ASSKLLDASK ENYNGSLKGE MEVGEYKGSK ALEPPHHENP KTSSAGSVRG DKKTRFGDDD
0401: ASGRSRKEYK GSQAPELAKK ETEASKLKSG HKEHSSRKQK SDQTEREPQS SSKFSKQKSS VVNETKMNGQ AEKKEVAALK PHNGGKKAED TYKDFFGDME
0501: DSEEEEEPPT LEDTPEKSRV PVTESQNVGP GPSVGKLGSD PSLPKANPVV IEEHWVACDK CGQWRLLPFG PVPKLPEKWM CTMLDWLPGA NYCDVPEDET
0601: TKAVYAMYQI PAPDSQAPVQ SGLKPQFNQG EDNTKKKRKG FKKLDNGMVK EGSRTAETSK KSILTSARNG TMHNSHGLSD FADEERQKHK QKERGKAVDH
0701: HSDHDSRSLK MNNKRNAERE SSMLAKKMKI ESFLFPDEGG ASDSGVPVAS ADKKNKTRVS SKMPKEEGGG ASDTGNSNST GGSKKRKLKE SHGSPRVYRE
0801: KENHERKKAR VLKEGKEPSF SHGSGKSEKK NKSHSRREYG HVAATSSSSH KPRNSSHEVK SSPVESVSSS PMRKKKVESH DTDFLAASSM RRFSDGEGDG
0901: GSDRSQTRRK NKHGSRESPV LDVCDNKGSL KAKVRAEPSL DANLENGGHK DHIHRRSNDS LAKKSGKGSS SRDGPRHIEK KINDGSSPDM VVKPNIPKPY
1001: DVERVSERSN RADLTSPARP PSRGDSSRKK VEKCGTSAGN NSIQADDVTK ATAQVRRRNE PSPSPLRKEV TSVQAAHGIL KEAKDLKHTA DRLKSSISNL
1101: EFIELYFQAC LKFLHGAFLL ETSSNESARQ GETMIHSTSI YSSTANLCGF CAREYEKSKE MGAAALAYKC MEAGYMRVLN SSYTSANRYR NELQTSLQIV
1201: PPGESPSSSA SDVDNVNNPA AVDRVGNSRC TSSPLVAGNH VISAQNRSNI LRIIQFAQNV NLAMDASRKS RVALAASIEN LGEDQQQGEG VLSIKSTLDY
1301: NFQDLEGLLR LVKLAMQANN R
0101: ESQSGNAASS SLPKKANSEL ASSRIPKKSM KSKKPNSSSR HESATEKPGV FSKQNSLKLR IKMGADSLPA EKNAAAIYSG LGLDVSPNSV SGSEAMSGEP
0201: QGYSPLESPA NILNVMTSLP VDPCQLLSPL SNDLIRFIER EKPEKGYKRT SPSRLFIESS SAMANRLEPQ KGGEDPSVEK KRKMLERNNL SADTNVRSKK
0301: GLLDGNDGSV KKPTETNTSY PSATEKETAS SKLFDASKET ASSKLLDASK ENYNGSLKGE MEVGEYKGSK ALEPPHHENP KTSSAGSVRG DKKTRFGDDD
0401: ASGRSRKEYK GSQAPELAKK ETEASKLKSG HKEHSSRKQK SDQTEREPQS SSKFSKQKSS VVNETKMNGQ AEKKEVAALK PHNGGKKAED TYKDFFGDME
0501: DSEEEEEPPT LEDTPEKSRV PVTESQNVGP GPSVGKLGSD PSLPKANPVV IEEHWVACDK CGQWRLLPFG PVPKLPEKWM CTMLDWLPGA NYCDVPEDET
0601: TKAVYAMYQI PAPDSQAPVQ SGLKPQFNQG EDNTKKKRKG FKKLDNGMVK EGSRTAETSK KSILTSARNG TMHNSHGLSD FADEERQKHK QKERGKAVDH
0701: HSDHDSRSLK MNNKRNAERE SSMLAKKMKI ESFLFPDEGG ASDSGVPVAS ADKKNKTRVS SKMPKEEGGG ASDTGNSNST GGSKKRKLKE SHGSPRVYRE
0801: KENHERKKAR VLKEGKEPSF SHGSGKSEKK NKSHSRREYG HVAATSSSSH KPRNSSHEVK SSPVESVSSS PMRKKKVESH DTDFLAASSM RRFSDGEGDG
0901: GSDRSQTRRK NKHGSRESPV LDVCDNKGSL KAKVRAEPSL DANLENGGHK DHIHRRSNDS LAKKSGKGSS SRDGPRHIEK KINDGSSPDM VVKPNIPKPY
1001: DVERVSERSN RADLTSPARP PSRGDSSRKK VEKCGTSAGN NSIQADDVTK ATAQVRRRNE PSPSPLRKEV TSVQAAHGIL KEAKDLKHTA DRLKSSISNL
1101: EFIELYFQAC LKFLHGAFLL ETSSNESARQ GETMIHSTSI YSSTANLCGF CAREYEKSKE MGAAALAYKC MEAGYMRVLN SSYTSANRYR NELQTSLQIV
1201: PPGESPSSSA SDVDNVNNPA AVDRVGNSRC TSSPLVAGNH VISAQNRSNI LRIIQFAQNV NLAMDASRKS RVALAASIEN LGEDQQQGEG VLSIKSTLDY
1301: NFQDLEGLLR LVKLAMQANN R
0001: MEESELEEGE ACSYNITNEY AGSIDPDNDL SYIDEKLQHI LGHFQKDFEG GVSAENLGAK YGGYGSFLPT YQRSPVWSHP KTPAKPQSST GTRSPNNLLG
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
Arabidopsis Description
CW-type Zinc Finger [Source:UniProtKB/TrEMBL;Acc:F4IZK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.