Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400013673 | Potato | cytosol, plastid, vacuole | 10.22 | 81.25 |
Os05t0371100-00 | Rice | cytosol | 3.93 | 34.25 |
Solyc09g074670.2.1 | Tomato | nucleus | 32.86 | 25.21 |
VIT_07s0104g01600.t01 | Wine grape | nucleus | 31.45 | 24.69 |
CDX76670 | Canola | nucleus | 24.69 | 24.44 |
CDY11456 | Canola | nucleus | 24.84 | 24.36 |
Bra007709.1-P | Field mustard | nucleus | 24.76 | 24.29 |
CDX67908 | Canola | nucleus | 24.84 | 24.14 |
Bra003514.1-P | Field mustard | nucleus | 24.92 | 24.0 |
CDY25123 | Canola | nucleus | 24.61 | 23.69 |
AT3G62900.2 | Thale cress | nucleus | 25.71 | 23.31 |
KRH68140 | Soybean | nucleus | 29.8 | 22.68 |
KRG96403 | Soybean | nucleus | 29.8 | 22.55 |
GSMUA_Achr5P08000_001 | Banana | nucleus | 23.19 | 20.85 |
OQU90452 | Sorghum | nucleus | 25.79 | 20.53 |
Solyc08g067570.1.1 | Tomato | nucleus | 5.19 | 20.37 |
Solyc12g017610.1.1 | Tomato | nucleus | 5.11 | 20.06 |
Zm00001d022481_P019 | Maize | nucleus | 25.08 | 20.03 |
KXG39393 | Sorghum | mitochondrion | 21.07 | 20.01 |
TraesCS2D01G118500.1 | Wheat | nucleus | 24.61 | 19.81 |
TraesCS2B01G135800.1 | Wheat | nucleus | 24.61 | 19.8 |
TraesCS2A01G116600.1 | Wheat | nucleus | 24.45 | 19.67 |
Zm00001d029134_P004 | Maize | mitochondrion | 20.83 | 19.41 |
Os03t0347300-01 | Rice | cytosol, nucleus | 14.07 | 19.31 |
Zm00001d007121_P024 | Maize | nucleus | 23.9 | 19.1 |
GSMUA_Achr3P08980_001 | Banana | nucleus | 24.29 | 18.8 |
Solyc08g067490.1.1 | Tomato | nucleus | 4.56 | 18.77 |
Zm00001d010490_P005 | Maize | nucleus | 20.75 | 18.57 |
OQU77880 | Sorghum | nucleus | 20.68 | 18.46 |
GSMUA_Achr8P21920_001 | Banana | nucleus | 22.88 | 18.36 |
Os07t0669800-01 | Rice | nucleus | 15.09 | 18.32 |
TraesCS1B01G246700.4 | Wheat | nucleus | 20.99 | 18.29 |
Solyc08g067140.1.1 | Tomato | nucleus | 3.77 | 18.11 |
TraesCS1D01G235200.1 | Wheat | nucleus | 20.91 | 18.1 |
Solyc01g067600.2.1 | Tomato | nucleus | 23.35 | 18.0 |
TraesCS1A01G237200.3 | Wheat | nucleus | 20.83 | 17.97 |
HORVU1Hr1G058250.1 | Barley | nucleus | 20.68 | 17.9 |
Solyc08g067590.1.1 | Tomato | nucleus | 1.26 | 13.33 |
Protein Annotations
EnsemblPlants:Solyc06g008720.2.1 | EnsemblPlantsGene:Solyc06g008720.2 | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF14 | SEG:seg | UniParc:UPI0002766917 |
UniProt:K4C3Q2 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr6:-:2628999..2637520
Molecular Weight (calculated)
138696.0 Da
IEP (calculated)
8.504
GRAVY (calculated)
-0.912
Length
1272 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNKNKFEEGE TCDDSTVDPD IALSYIDEKL QDVLGHFQKD FEDGVSSENL GSKFGGYGSF LPTYQRSPSW TCTKTPPDAY NNNRSTSPSS LRPEGGRRPS
0101: SASSSASLSG KPLASSAYSS TIVPTLKAPA ANGKTNSSLQ PAQDEDSTSR SELVKKPTNL SDKKTPKLHA RIGIKKFSTQ KKAEIYSGLG LDVSPSSSLD
0201: DSPISSEGLS HDLRDSRYES PTSILQIMTS YPMHDGLLLS PLSDDLLCLT EKEKVRGGST SECMIQESLE TSVTLVNGAH YANRRSSEAR KWKSYNKDVL
0301: GIGYGSDNQN GSTVQSKELD LKVITCEELV SEALKLPLLS NPNHNVADPL KDAGRVSDSP RAAVRDKTAE CSSYKAGSQE SRSPEMLKVS DAVGNKSLVE
0401: HNCLTKERVN VGKTEKPCSS GEYPILASNE STSLDALHAS QDNRDHSVQG IDSSGRKRYG SKGSSSGTKE DGSQSSNYVM MNHQENPNCR SSSGTSRSLD
0501: KTCNQHTGVP NSSVVEKRRH KNKEKKISHD NHSDGGTKDA NTRNTSEVES DVSSKKIIQD DALDDENQTF CPVVEKSRWS SSSKMPEMIR DKCKNRDSED
0601: DSKKDLVSAK NPEAYISDVS THKGKCDNND SPIKRKGREL RDSLTCNPQD SMEKICDDIS RKEKVARVSL SDRKDTSASK GSAGTGQVKK EQQAGQDLDS
0701: TLSLLSVKAA DSSQKDLCNS RPSVAPSSAL PTSSPKRSSD GENDVFSNKS SMVKKDNACN GKSYDLLSEA ELEEKDVHRE SGKKVKAKSM VSGYATQQDT
0801: DVSADPLRQA SHFACKTGNS DQGSDKERKN DHQFQNSGSV SNRKRGSSSR RKEKNRAPKS DSDQCKTKDT DILNLSSEQM PFNEEKTAPG KNKSQGKSVV
0901: GSDRLKKSSK KDPSGKLLEK NVKGDNESRF VHRDDAEVQM DVVARLDKRQ ATLPERDDER SSKVISNKSE QINVSSKSPL TRDQNETAVF KEPVPGSERE
1001: NGNAFERERS NTSRQGKKAK SHHGNLPNNT ANKVRYQDVP SPVRKDSSSQ AATNAIKEAT NLKHLADRLK NSGSSESTGI YFQAALKFLH GASLLELDSS
1101: KHGEQNQSRS IYSSTAKLCQ FCGHEYEKLR DMAAAALAYK CMEVAYMRVI YSSQSDANRY RNELQTALQI FPPVDMAASA KVVGSPQVAG THVISAGNGS
1201: SFTQLINLAQ AVNFAMEASR KSRVAFAAVY PGPGDSQCKE GALSVKRALD FNFQDVDGLL RLVRVAMEAI SH
0101: SASSSASLSG KPLASSAYSS TIVPTLKAPA ANGKTNSSLQ PAQDEDSTSR SELVKKPTNL SDKKTPKLHA RIGIKKFSTQ KKAEIYSGLG LDVSPSSSLD
0201: DSPISSEGLS HDLRDSRYES PTSILQIMTS YPMHDGLLLS PLSDDLLCLT EKEKVRGGST SECMIQESLE TSVTLVNGAH YANRRSSEAR KWKSYNKDVL
0301: GIGYGSDNQN GSTVQSKELD LKVITCEELV SEALKLPLLS NPNHNVADPL KDAGRVSDSP RAAVRDKTAE CSSYKAGSQE SRSPEMLKVS DAVGNKSLVE
0401: HNCLTKERVN VGKTEKPCSS GEYPILASNE STSLDALHAS QDNRDHSVQG IDSSGRKRYG SKGSSSGTKE DGSQSSNYVM MNHQENPNCR SSSGTSRSLD
0501: KTCNQHTGVP NSSVVEKRRH KNKEKKISHD NHSDGGTKDA NTRNTSEVES DVSSKKIIQD DALDDENQTF CPVVEKSRWS SSSKMPEMIR DKCKNRDSED
0601: DSKKDLVSAK NPEAYISDVS THKGKCDNND SPIKRKGREL RDSLTCNPQD SMEKICDDIS RKEKVARVSL SDRKDTSASK GSAGTGQVKK EQQAGQDLDS
0701: TLSLLSVKAA DSSQKDLCNS RPSVAPSSAL PTSSPKRSSD GENDVFSNKS SMVKKDNACN GKSYDLLSEA ELEEKDVHRE SGKKVKAKSM VSGYATQQDT
0801: DVSADPLRQA SHFACKTGNS DQGSDKERKN DHQFQNSGSV SNRKRGSSSR RKEKNRAPKS DSDQCKTKDT DILNLSSEQM PFNEEKTAPG KNKSQGKSVV
0901: GSDRLKKSSK KDPSGKLLEK NVKGDNESRF VHRDDAEVQM DVVARLDKRQ ATLPERDDER SSKVISNKSE QINVSSKSPL TRDQNETAVF KEPVPGSERE
1001: NGNAFERERS NTSRQGKKAK SHHGNLPNNT ANKVRYQDVP SPVRKDSSSQ AATNAIKEAT NLKHLADRLK NSGSSESTGI YFQAALKFLH GASLLELDSS
1101: KHGEQNQSRS IYSSTAKLCQ FCGHEYEKLR DMAAAALAYK CMEVAYMRVI YSSQSDANRY RNELQTALQI FPPVDMAASA KVVGSPQVAG THVISAGNGS
1201: SFTQLINLAQ AVNFAMEASR KSRVAFAAVY PGPGDSQCKE GALSVKRALD FNFQDVDGLL RLVRVAMEAI SH
0001: MEESELEEGE ACSYNITNEY AGSIDPDNDL SYIDEKLQHI LGHFQKDFEG GVSAENLGAK YGGYGSFLPT YQRSPVWSHP KTPAKPQSST GTRSPNNLLG
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
Arabidopsis Description
CW-type Zinc Finger [Source:UniProtKB/TrEMBL;Acc:F4IZK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.