Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G15730.1 | EER90511 | AT1G01630.1 | 21798944 |
| AT4G15730.1 | EES02002 | AT1G01630.1 | 21798944 |
| AT4G15730.1 | EES02004 | AT1G01630.1 | 21798944 |
| AT4G15730.1 | KXG32187 | AT4G02150.1 | 21798944 |
| AT4G15730.1 | KXG38234 | AT4G04950.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029134_P004 | Maize | mitochondrion | 71.25 | 69.89 |
| VIT_14s0128g00910.t01 | Wine grape | cytosol | 3.44 | 48.94 |
| Os03t0347300-01 | Rice | cytosol, nucleus | 32.41 | 46.82 |
| PGSC0003DMT400013673 | Potato | cytosol, plastid, vacuole | 4.71 | 39.38 |
| OQU90452 | Sorghum | nucleus | 43.61 | 36.55 |
| PGSC0003DMT400005774 | Potato | cytosol | 2.32 | 33.7 |
| PGSC0003DMT400029537 | Potato | mitochondrion | 1.42 | 33.33 |
| PGSC0003DMT400039034 | Potato | nucleus | 7.39 | 31.23 |
| PGSC0003DMT400005780 | Potato | nucleus | 7.32 | 31.01 |
| PGSC0003DMT400039039 | Potato | nucleus | 7.24 | 30.22 |
| Solyc08g067570.1.1 | Tomato | nucleus | 7.24 | 29.94 |
| PGSC0003DMT400031270 | Potato | nucleus | 7.09 | 29.59 |
| Solyc12g017610.1.1 | Tomato | nucleus | 7.09 | 29.32 |
| Solyc08g067490.1.1 | Tomato | nucleus | 6.57 | 28.48 |
| GSMUA_Achr5P08000_001 | Banana | nucleus | 29.87 | 28.27 |
| CDX89924 | Canola | nucleus | 18.67 | 26.1 |
| Solyc08g067590.1.1 | Tomato | nucleus | 2.32 | 25.83 |
| GSMUA_Achr8P21920_001 | Banana | nucleus | 29.72 | 25.11 |
| Solyc08g067140.1.1 | Tomato | nucleus | 4.93 | 24.91 |
| GSMUA_Achr3P08980_001 | Banana | nucleus | 30.55 | 24.88 |
| CDY18138 | Canola | nucleus | 17.63 | 24.79 |
| VIT_07s0104g01600.t01 | Wine grape | nucleus | 29.8 | 24.63 |
| OQU77880 | Sorghum | nucleus | 25.77 | 24.21 |
| Bra007709.1-P | Field mustard | nucleus | 23.45 | 24.21 |
| CDY11456 | Canola | nucleus | 23.45 | 24.21 |
| PGSC0003DMT400065641 | Potato | nucleus | 3.36 | 24.19 |
| CDX67908 | Canola | nucleus | 23.6 | 24.14 |
| CDX76670 | Canola | nucleus | 23.08 | 24.05 |
| Bra003514.1-P | Field mustard | nucleus | 23.67 | 24.0 |
| CDY37451 | Canola | nucleus | 18.52 | 23.92 |
| Bra032575.1-P | Field mustard | nucleus | 12.47 | 23.82 |
| CDY25123 | Canola | nucleus | 23.3 | 23.62 |
| CDY32489 | Canola | nucleus | 18.82 | 23.44 |
| CDY54298 | Canola | nucleus | 16.28 | 23.19 |
| AT3G62900.2 | Thale cress | nucleus | 24.2 | 23.09 |
| CDY66331 | Canola | nucleus | 16.06 | 22.97 |
| Bra033505.1-P | Field mustard | nucleus | 15.98 | 22.86 |
| PGSC0003DMT400005776 | Potato | nucleus | 4.33 | 22.48 |
| KRG96403 | Soybean | nucleus | 28.01 | 22.31 |
| AT4G15730.1 | Thale cress | nucleus | 17.33 | 21.91 |
| KRH68140 | Soybean | nucleus | 27.33 | 21.9 |
| Solyc09g074670.2.1 | Tomato | nucleus | 26.66 | 21.53 |
| Solyc06g008720.2.1 | Tomato | nucleus | 20.01 | 21.07 |
| VIT_14s0128g00900.t01 | Wine grape | nucleus | 20.16 | 20.61 |
| AT1G02990.4 | Thale cress | nucleus | 19.57 | 20.5 |
| KRH50884 | Soybean | nucleus | 24.35 | 20.27 |
| KRH12132 | Soybean | nucleus | 25.54 | 20.22 |
| KRH37127 | Soybean | nucleus | 25.17 | 20.13 |
| Solyc01g067600.2.1 | Tomato | nucleus | 24.65 | 20.0 |
| KRH02231 | Soybean | nucleus | 23.9 | 19.69 |
| VIT_05s0020g01570.t01 | Wine grape | cytosol, mitochondrion, plastid | 23.15 | 19.04 |
| Bra033364.1-P | Field mustard | nucleus | 15.91 | 13.85 |
Protein Annotations
| EnsemblPlants:KXG39393 | EnsemblPlantsGene:SORBI_3001G373700 | Gene3D:3.30.40.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 |
| InterPro:IPR011124 | InterPro:Znf_CW | ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF14 | PFAM:PF07496 |
| PFscan:PS51050 | ProteinID:KXG39393 | ProteinID:KXG39393.1 | SEG:seg | UniParc:UPI00081AC4CB | UniProt:A0A1B6QNA1 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:66180486..66191634
Molecular Weight (calculated)
146211.0 Da
IEP (calculated)
8.513
GRAVY (calculated)
-0.690
Length
1339 amino acids
Sequence
(BLAST)
(BLAST)
0001: MQLVGRGMQS LRGARREGAG SCSSRGGRVA GETEELEEGE ARSDDDGEAF VDPNVDLSYI DEKLQHVLGH FQKEFEGEVS VENLGSKFGG YGSFLPTYQR
0101: SPLFTQSESP HIAANISTSG SPYQPSAERM DQNPSTVAVE PISRTNGSGA PSASDLLKKK CPSTDIEESV AGSDSLYSSS SSGDSKSVKL QTKVCLNNDL
0201: PRENAVIYSG LGLEISSPSS MEESPDGLGG LSPDVPYESP RTILQVMTYF PVPGGFLLSP LHGNLLQLRN NKVAPELKNW ETHLDMENVS RALEGRSQSS
0301: HPPGPIRGNV AKQMKPCSKK KVSMDTKTRK YKGDASAIMN KEVNIQVPAS QKEKMMNTNN ENGFEVGSAR KEIPASVKHG QLYMQPTSSV ATMNADPVAA
0401: PVVIEEHWVR CDICQKLRLL PYGTNPSMLP NKWKCTMLHW LPGMNRCDIS EDETTEALNA LFAIPATAAT FSSGGPHTAG AGTGTATSSA YNISGQFERS
0501: RKRKNAPSNG KDLAGSSYRT PLLTPSMSNQ QDPIRDERTT DDMHYSSKTD SVSKHGPRPV SKSADLVSEK LKPKHRNHSS YSDEGGIMER NKAHPKVKTK
0601: IGIDQDEQKT YKRTKMEDWH QIDRGQDHKC DSDGMEVPDE PKALLAKAKT MKGSNETGDI SLRKEDIASG CDSLENIKNV NSFGIPFHSE KKEHPSDVDI
0701: LDLSCKKNVV KKLEEIQLNS LHRISNRSKK NLKEKKSNTF KSKEMASKAD SRHGKVLHAD VVLSSVGHLN YELGADKFVT GKESPAKQAL DLTEAPGRYV
0801: SYLQSSTAVT SSSSKISSSR RNTNSQEAKD SPVKSASSSP PRNFNIKMIS STRKDGIVDG SLGNTHNLVR YQNSEVIALN NGQKTENFEG VQVAGEPNFH
0901: GPLQGISDSN IKEIPQSAGA QVSNITGSER SLDNSLPKAS WREDLTVNDT GVGRGDHQLC SGDKKDFDME GRSQHPFDRR ATTLNTESCP IQHGSKNIEI
1001: RQGSGTAQRM GMSFEKEKSH LRIDNQDIQN PVNEVVNFPL KEGKQKVYPT SVKSDSLKMK AKLVRFNVET GVQHGTVKQA TSNTLKTSPM RKDGSMITFA
1101: LKEARDLKHK ANDLKNKGQE LESTGLYFEA ALKFLHVAFL LETPSFDISR PGDGAKSMKM YSETAKLCNF CAHEYERCKK MAAAALAYKC VEVAYLKAAY
1201: YKHRSASKDQ QELQAAVQIA RGESPSSATP DIDNLNSHGL SKASSLKGGN SPHVPGNHLH LAVHNQAHLL RLLSYTNDVN LAFNATQKAE FVIASAAGSK
1301: ERGGVDDGLA LVKTVLDLNF NNVNELVRLV RVSMESISS
0101: SPLFTQSESP HIAANISTSG SPYQPSAERM DQNPSTVAVE PISRTNGSGA PSASDLLKKK CPSTDIEESV AGSDSLYSSS SSGDSKSVKL QTKVCLNNDL
0201: PRENAVIYSG LGLEISSPSS MEESPDGLGG LSPDVPYESP RTILQVMTYF PVPGGFLLSP LHGNLLQLRN NKVAPELKNW ETHLDMENVS RALEGRSQSS
0301: HPPGPIRGNV AKQMKPCSKK KVSMDTKTRK YKGDASAIMN KEVNIQVPAS QKEKMMNTNN ENGFEVGSAR KEIPASVKHG QLYMQPTSSV ATMNADPVAA
0401: PVVIEEHWVR CDICQKLRLL PYGTNPSMLP NKWKCTMLHW LPGMNRCDIS EDETTEALNA LFAIPATAAT FSSGGPHTAG AGTGTATSSA YNISGQFERS
0501: RKRKNAPSNG KDLAGSSYRT PLLTPSMSNQ QDPIRDERTT DDMHYSSKTD SVSKHGPRPV SKSADLVSEK LKPKHRNHSS YSDEGGIMER NKAHPKVKTK
0601: IGIDQDEQKT YKRTKMEDWH QIDRGQDHKC DSDGMEVPDE PKALLAKAKT MKGSNETGDI SLRKEDIASG CDSLENIKNV NSFGIPFHSE KKEHPSDVDI
0701: LDLSCKKNVV KKLEEIQLNS LHRISNRSKK NLKEKKSNTF KSKEMASKAD SRHGKVLHAD VVLSSVGHLN YELGADKFVT GKESPAKQAL DLTEAPGRYV
0801: SYLQSSTAVT SSSSKISSSR RNTNSQEAKD SPVKSASSSP PRNFNIKMIS STRKDGIVDG SLGNTHNLVR YQNSEVIALN NGQKTENFEG VQVAGEPNFH
0901: GPLQGISDSN IKEIPQSAGA QVSNITGSER SLDNSLPKAS WREDLTVNDT GVGRGDHQLC SGDKKDFDME GRSQHPFDRR ATTLNTESCP IQHGSKNIEI
1001: RQGSGTAQRM GMSFEKEKSH LRIDNQDIQN PVNEVVNFPL KEGKQKVYPT SVKSDSLKMK AKLVRFNVET GVQHGTVKQA TSNTLKTSPM RKDGSMITFA
1101: LKEARDLKHK ANDLKNKGQE LESTGLYFEA ALKFLHVAFL LETPSFDISR PGDGAKSMKM YSETAKLCNF CAHEYERCKK MAAAALAYKC VEVAYLKAAY
1201: YKHRSASKDQ QELQAAVQIA RGESPSSATP DIDNLNSHGL SKASSLKGGN SPHVPGNHLH LAVHNQAHLL RLLSYTNDVN LAFNATQKAE FVIASAAGSK
1301: ERGGVDDGLA LVKTVLDLNF NNVNELVRLV RVSMESISS
0001: MEESELEEGE ACSYNITNEY AGSIDPDNDL SYIDEKLQHI LGHFQKDFEG GVSAENLGAK YGGYGSFLPT YQRSPVWSHP KTPAKPQSST GTRSPNNLLG
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
Arabidopsis Description
CW-type Zinc Finger [Source:UniProtKB/TrEMBL;Acc:F4IZK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.