Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89924 | Canola | nucleus | 32.44 | 52.09 |
| Bra032575.1-P | Field mustard | nucleus | 20.81 | 45.65 |
| AT1G02990.4 | Thale cress | nucleus | 26.33 | 31.69 |
| VIT_14s0128g00910.t01 | Wine grape | cytosol | 1.24 | 20.21 |
| Bra007709.1-P | Field mustard | nucleus | 16.19 | 19.2 |
| Os03t0347300-01 | Rice | cytosol, nucleus | 11.38 | 18.88 |
| Bra003514.1-P | Field mustard | nucleus | 15.99 | 18.62 |
| OQU90452 | Sorghum | nucleus | 16.91 | 16.27 |
| Zm00001d022481_P019 | Maize | nucleus | 16.84 | 16.26 |
| GSMUA_Achr5P08000_001 | Banana | nucleus | 14.95 | 16.25 |
| Bra033505.1-P | Field mustard | nucleus | 9.88 | 16.24 |
| KXG39393 | Sorghum | mitochondrion | 13.85 | 15.91 |
| TraesCS2B01G135800.1 | Wheat | nucleus | 16.25 | 15.81 |
| TraesCS2D01G118500.1 | Wheat | nucleus | 16.19 | 15.76 |
| HORVU1Hr1G058250.1 | Barley | nucleus | 15.02 | 15.72 |
| TraesCS2A01G116600.1 | Wheat | nucleus | 16.12 | 15.69 |
| TraesCS1B01G246700.4 | Wheat | nucleus | 14.89 | 15.68 |
| TraesCS1D01G235200.1 | Wheat | nucleus | 14.95 | 15.65 |
| GSMUA_Achr8P21920_001 | Banana | nucleus | 16.06 | 15.58 |
| TraesCS1A01G237200.3 | Wheat | nucleus | 14.89 | 15.53 |
| Zm00001d007121_P024 | Maize | nucleus | 15.99 | 15.45 |
| Zm00001d010490_P005 | Maize | nucleus | 13.85 | 14.98 |
| OQU77880 | Sorghum | nucleus | 13.59 | 14.67 |
| GSMUA_Achr3P08980_001 | Banana | nucleus | 15.21 | 14.23 |
| Zm00001d029134_P004 | Maize | mitochondrion | 12.61 | 14.21 |
| Os07t0669800-01 | Rice | nucleus | 8.71 | 12.79 |
| Os05t0371100-00 | Rice | cytosol | 1.17 | 12.33 |
Protein Annotations
| EnsemblPlants:Bra033364.1 | EnsemblPlants:Bra033364.1-P | EnsemblPlantsGene:Bra033364 | Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core |
| InterPro:P-loop_NTPase | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF14 | PFAM:PF00004 | ScanProsite:PS00674 | SEG:seg |
| SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI0002544BD9 | UniProt:M4EX29 | MapMan:23.4.1.5.1.2 | : |
Description
AT1G03000 (E=2e-175) PEX6 | PEX6 (PEROXIN 6); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding
Coordinates
chrA10:+:4053838..4062172
Molecular Weight (calculated)
166673.0 Da
IEP (calculated)
7.795
GRAVY (calculated)
-0.523
Length
1538 amino acids
Sequence
(BLAST)
(BLAST)
0001: MQICWRVIFS ASPDPLPPRG GENVSDSKFD SFDDSALVGL STQSLKRLSI NAGSLVVINN IDISIQRIAQ VVVLDPPPKT TTLDDASLVL DSLHTMLVFP
0101: TYDLMMTQQL LSQEVAYLSP MLAFNLGLHV SCLKSLVHRG NEVLEKYFVA KFDEGESAVI AMEPSNERFL RVSHYQTALV LGGTVSSGLP PDLLVSRSKV
0201: PMPLQEDAVN VLASVLSPPL CPSALSSKLR VAVLLHGLPG CGKRTVVNYV ARRLGLHVVE YSCHSLLSSS ERKTSTALAH AFNMARRYTP TILLLHHFDV
0301: FKNLGSQDGS QGDRVGVASE IASVIRELTE PVSNGEYSSM EEESNDTSSV DEVGKFRGHQ VLLIASAEST EGLSPTIRRC FIHEIRMGSL NDEQRSEMLS
0401: QSLQGVSQLL NTSSDEFVKE LVGQTSGFLP RDLRALVADA GANLFNSKES ETEKMNSLSG DHVGDDVDQS SQLDKSNETL IPKEDFTKAL DRSKKRNASA
0501: LGAPKVPNVK WDDVGGLEDV KTSILDTVQL PLLHKDLFSS GLRKRSGVLL YGPPGTGKDL FIIGASNRPD LIDPALLRPG RFDKLLYVGV NADASYRERV
0601: LKALTRKFKL SEDVSLYSVA KKCPSTFTGA DMYALCADAW FQAAKRGAKY GGYGSFLSMY QRSPVCKSPP PQGQHQVVSG SKCSASSAVP QVSVSGSTSK
0701: APPASDVLVK SSNIGTSDSK PKSATKPSSS GPLNHKTFRL RIKVGSSDLS SPKNVSTYNS KQGFNTPPST SEGEEGLLNG IHDSPTKILM AIVSFPLHKD
0801: QLLSPLSDDL IQLGKKEKII TDSGYVSVNK SDSKPELEKV SKSETRNEDQ ILKSELPEAH KSQKGSSRNS LRGKDTAVNI SNTAVVDKYQ EDIGGSEDVC
0901: EGLVGDSGES KEQEQSSLVI EAKKEKLSEE NALKESLDSV QSDEEACKHL PLGVGSEREL SGTCKKPKTG KSRFSSVDQP GSNKTLDGVN KTMITQASAH
1001: KLKDIAKASS HDGHEDRKRK QEENKASGDC MRLREAAAME SAVEKVRKKK RLKGSSCDKD RGSSQENGRD SASHLPIRAS SPSLLCKDLS SEIIKTNVHE
1101: VKGSLVDTPA PSALDPLEPK PGRNSEGDEH HDIDFSAGDA LKRCRDGQGY STMDNPGTTK EGAQSSKDTA VEVKTKESRS KKIPTRKVSR ESNKEGSKEY
1201: QDPDTKLDTN GSHFHSPQNS DKAKTIRGKS NHLEVTAEKV KNKPSPPVEV LGHGTEISNT KEQMMRNDNH SSLNQKQNGS THKDDDVGSS PLKKESTCQT
1301: ASNSIKEATD LKHMADRLKN VVSNQESTSV YFQAALKFLH GASLLESSGS IARSNDIYGS TSKLCEFCAH EYEKNKDMGA AALAYKCMEV AYLRITYSSH
1401: GNINRYRSEL QAALQEIPSG GSPSFASDGE NPNQTLAAEK AALSNTVRSS PRVTGNHVLS SGNNFSLSQL LSFSQNVSYA MDASRKAQTA FAIAKGISSG
1501: TRYSSNGIAS IKRALDFDFQ DMEKLLRVVR LAMESINM
0101: TYDLMMTQQL LSQEVAYLSP MLAFNLGLHV SCLKSLVHRG NEVLEKYFVA KFDEGESAVI AMEPSNERFL RVSHYQTALV LGGTVSSGLP PDLLVSRSKV
0201: PMPLQEDAVN VLASVLSPPL CPSALSSKLR VAVLLHGLPG CGKRTVVNYV ARRLGLHVVE YSCHSLLSSS ERKTSTALAH AFNMARRYTP TILLLHHFDV
0301: FKNLGSQDGS QGDRVGVASE IASVIRELTE PVSNGEYSSM EEESNDTSSV DEVGKFRGHQ VLLIASAEST EGLSPTIRRC FIHEIRMGSL NDEQRSEMLS
0401: QSLQGVSQLL NTSSDEFVKE LVGQTSGFLP RDLRALVADA GANLFNSKES ETEKMNSLSG DHVGDDVDQS SQLDKSNETL IPKEDFTKAL DRSKKRNASA
0501: LGAPKVPNVK WDDVGGLEDV KTSILDTVQL PLLHKDLFSS GLRKRSGVLL YGPPGTGKDL FIIGASNRPD LIDPALLRPG RFDKLLYVGV NADASYRERV
0601: LKALTRKFKL SEDVSLYSVA KKCPSTFTGA DMYALCADAW FQAAKRGAKY GGYGSFLSMY QRSPVCKSPP PQGQHQVVSG SKCSASSAVP QVSVSGSTSK
0701: APPASDVLVK SSNIGTSDSK PKSATKPSSS GPLNHKTFRL RIKVGSSDLS SPKNVSTYNS KQGFNTPPST SEGEEGLLNG IHDSPTKILM AIVSFPLHKD
0801: QLLSPLSDDL IQLGKKEKII TDSGYVSVNK SDSKPELEKV SKSETRNEDQ ILKSELPEAH KSQKGSSRNS LRGKDTAVNI SNTAVVDKYQ EDIGGSEDVC
0901: EGLVGDSGES KEQEQSSLVI EAKKEKLSEE NALKESLDSV QSDEEACKHL PLGVGSEREL SGTCKKPKTG KSRFSSVDQP GSNKTLDGVN KTMITQASAH
1001: KLKDIAKASS HDGHEDRKRK QEENKASGDC MRLREAAAME SAVEKVRKKK RLKGSSCDKD RGSSQENGRD SASHLPIRAS SPSLLCKDLS SEIIKTNVHE
1101: VKGSLVDTPA PSALDPLEPK PGRNSEGDEH HDIDFSAGDA LKRCRDGQGY STMDNPGTTK EGAQSSKDTA VEVKTKESRS KKIPTRKVSR ESNKEGSKEY
1201: QDPDTKLDTN GSHFHSPQNS DKAKTIRGKS NHLEVTAEKV KNKPSPPVEV LGHGTEISNT KEQMMRNDNH SSLNQKQNGS THKDDDVGSS PLKKESTCQT
1301: ASNSIKEATD LKHMADRLKN VVSNQESTSV YFQAALKFLH GASLLESSGS IARSNDIYGS TSKLCEFCAH EYEKNKDMGA AALAYKCMEV AYLRITYSSH
1401: GNINRYRSEL QAALQEIPSG GSPSFASDGE NPNQTLAAEK AALSNTVRSS PRVTGNHVLS SGNNFSLSQL LSFSQNVSYA MDASRKAQTA FAIAKGISSG
1501: TRYSSNGIAS IKRALDFDFQ DMEKLLRVVR LAMESINM
0001: MFLALTQMLL SLTLMRNSKT SWDIFRKILK VEFLLKIWFG GYGSFLSMYQ RSPVCSRPKT SPEVQQNQLG GRSNCSASSL VPQLSISGSA SKPPASDVLV
0101: KLNKFVKSSH IGTPDSKHMS DAKTSSSAPS NHKTLRFRIK VGSSDLSSLK NVSTFTKEGL NMLPSASRVN CLSEVEQDLL NGICDSPTKI LMAMVSFPLH
0201: KDQLLSPLSD DLIQLGSKEK ILKDAGYGST NKTDAKSTPD GLVVSDSQKR AGKFPIGKKE KLRDRVKYRP PSNKLDRNHT VSNTEKEADK ESCEELVSKT
0301: MKLPLLSCLS PSYIHPAKEI DNVSDSNVES ILRGTNKDAA LMGSKPELED NVVAFSDRSV KETESINVRK DVYLIKGEPL NSLESNPKRE KAPSIEHVDY
0401: SSVVKGTQSE TRNEEQILKS KLPKVQRSQK GSSSIVTMNS QRGKDAAVNI IKKNVPDKLQ EDIEESEHMC KGFFGDSKES KEEKQISPVL KAEKEKLSEE
0501: NALGESFNSV KNDEEACDHL NLVCEPDLKH LIKPSDLNED RHTTKQSVRR EVKNKHSLEG GMENMGMESE RELSGVSKKP KTGKSRFSAV DQPGSNKSNQ
0601: ILEVLDTNKT MITQALAENV KDFAKASSHG ERDDRKRKLK ENEESGDCMR LREAAVMESS GENVRKRKRL KGSSCDEKEL PFSSESCDKE RSVSQENGRD
0701: SASHLPSTLS SPSLCKDLGS EIIKNNVRES KGSLVESVAP LALRVLDSGE LKSGRISERD EYHDTDYNAG ETLKRCRDGE AYSTIDRPGT TKKAAEDSKD
0801: RERAYGEDCS IENLKPKKSG RYPGENCIEG DSKQKSREEE SSAPSKDNNW GLVNNVQDLG TAVKVKTKES RSKKRPARKV SMECNKEDSR EYQDPNTKLD
0901: RSGSHFSSRQ KPDTANTSRG KSNPLEVTTE QLKNKSASPA QVEVLGHDTE ISNTKKQRLR NDNHSVTHDE GSRNQKQNGS RHKDHVGLSP FKKESTSQTA
1001: SNSIKEATDL KHMADRLKNA VSNHESTGVY FQAALKFLHG ASLLESSGTT IARSKDIYGS TAKLCEFCAH EYEKNKDMGA AALAYKCMEV AYLRITYTSH
1101: GNIRRCRYEL QAALQVIPSG ESPSFASDGE NSNHTLTAEK FALSNTVRSS PSVTGNHVIS SGNNSSLSQL LAFSKNVNYA MEASRKAQIA LAAAKGKSFE
1201: TRYSSNGITC IKRALDFNFQ DMEKLLHVVR LAMESINR
0101: KLNKFVKSSH IGTPDSKHMS DAKTSSSAPS NHKTLRFRIK VGSSDLSSLK NVSTFTKEGL NMLPSASRVN CLSEVEQDLL NGICDSPTKI LMAMVSFPLH
0201: KDQLLSPLSD DLIQLGSKEK ILKDAGYGST NKTDAKSTPD GLVVSDSQKR AGKFPIGKKE KLRDRVKYRP PSNKLDRNHT VSNTEKEADK ESCEELVSKT
0301: MKLPLLSCLS PSYIHPAKEI DNVSDSNVES ILRGTNKDAA LMGSKPELED NVVAFSDRSV KETESINVRK DVYLIKGEPL NSLESNPKRE KAPSIEHVDY
0401: SSVVKGTQSE TRNEEQILKS KLPKVQRSQK GSSSIVTMNS QRGKDAAVNI IKKNVPDKLQ EDIEESEHMC KGFFGDSKES KEEKQISPVL KAEKEKLSEE
0501: NALGESFNSV KNDEEACDHL NLVCEPDLKH LIKPSDLNED RHTTKQSVRR EVKNKHSLEG GMENMGMESE RELSGVSKKP KTGKSRFSAV DQPGSNKSNQ
0601: ILEVLDTNKT MITQALAENV KDFAKASSHG ERDDRKRKLK ENEESGDCMR LREAAVMESS GENVRKRKRL KGSSCDEKEL PFSSESCDKE RSVSQENGRD
0701: SASHLPSTLS SPSLCKDLGS EIIKNNVRES KGSLVESVAP LALRVLDSGE LKSGRISERD EYHDTDYNAG ETLKRCRDGE AYSTIDRPGT TKKAAEDSKD
0801: RERAYGEDCS IENLKPKKSG RYPGENCIEG DSKQKSREEE SSAPSKDNNW GLVNNVQDLG TAVKVKTKES RSKKRPARKV SMECNKEDSR EYQDPNTKLD
0901: RSGSHFSSRQ KPDTANTSRG KSNPLEVTTE QLKNKSASPA QVEVLGHDTE ISNTKKQRLR NDNHSVTHDE GSRNQKQNGS RHKDHVGLSP FKKESTSQTA
1001: SNSIKEATDL KHMADRLKNA VSNHESTGVY FQAALKFLHG ASLLESSGTT IARSKDIYGS TAKLCEFCAH EYEKNKDMGA AALAYKCMEV AYLRITYTSH
1101: GNIRRCRYEL QAALQVIPSG ESPSFASDGE NSNHTLTAEK FALSNTVRSS PSVTGNHVIS SGNNSSLSQL LAFSKNVNYA MEASRKAQIA LAAAKGKSFE
1201: TRYSSNGITC IKRALDFNFQ DMEKLLHVVR LAMESINR
Arabidopsis Description
BEST Arabidopsis thaliana protein match is: CW-type Zinc Finger (TAIR:AT3G62900.1); Has 5847 Blast hits to 4410 proteins in 438 species: Archae - 17; Bacteria - 452; Metazoa - 2463; Fungi - 354; Plants - 306; Viruses - 11; Other Eukaryotes - 2244 (s /.../ NCBI BLink). [Source:TAIR;Acc:AT1G02990]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.