Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11456 | Canola | nucleus | 99.61 | 99.61 |
| Bra003514.1-P | Field mustard | nucleus | 65.84 | 64.65 |
| AT3G62900.2 | Thale cress | nucleus | 66.0 | 61.01 |
| PGSC0003DMT400013673 | Potato | cytosol, plastid, vacuole | 6.86 | 55.62 |
| PGSC0003DMT400029537 | Potato | mitochondrion | 2.08 | 47.37 |
| Os05t0371100-00 | Rice | cytosol | 3.62 | 32.19 |
| VIT_07s0104g01600.t01 | Wine grape | nucleus | 39.01 | 31.23 |
| Bra032575.1-P | Field mustard | nucleus | 15.42 | 28.53 |
| KRH68140 | Soybean | nucleus | 36.31 | 28.19 |
| KRG96403 | Soybean | nucleus | 35.93 | 27.72 |
| Bra033505.1-P | Field mustard | nucleus | 18.5 | 25.64 |
| Solyc09g074670.2.1 | Tomato | nucleus | 32.61 | 25.51 |
| GSMUA_Achr5P08000_001 | Banana | nucleus | 27.37 | 25.09 |
| Os03t0347300-01 | Rice | cytosol, nucleus | 17.89 | 25.03 |
| Solyc06g008720.2.1 | Tomato | nucleus | 24.29 | 24.76 |
| KXG39393 | Sorghum | mitochondrion | 24.21 | 23.45 |
| GSMUA_Achr8P21920_001 | Banana | nucleus | 28.37 | 23.22 |
| TraesCS2B01G135800.1 | Wheat | nucleus | 27.6 | 22.64 |
| TraesCS1B01G246700.4 | Wheat | nucleus | 25.44 | 22.6 |
| TraesCS2D01G118500.1 | Wheat | nucleus | 27.53 | 22.59 |
| TraesCS2A01G116600.1 | Wheat | nucleus | 27.45 | 22.52 |
| TraesCS1D01G235200.1 | Wheat | nucleus | 25.37 | 22.38 |
| Zm00001d022481_P019 | Maize | nucleus | 27.14 | 22.1 |
| TraesCS1A01G237200.3 | Wheat | nucleus | 25.06 | 22.03 |
| GSMUA_Achr3P08980_001 | Banana | nucleus | 27.76 | 21.9 |
| Zm00001d029134_P004 | Maize | mitochondrion | 22.98 | 21.83 |
| HORVU1Hr1G058250.1 | Barley | nucleus | 24.67 | 21.78 |
| OQU90452 | Sorghum | nucleus | 26.83 | 21.78 |
| Zm00001d007121_P024 | Maize | nucleus | 26.52 | 21.61 |
| Zm00001d010490_P005 | Maize | nucleus | 23.52 | 21.45 |
| Os07t0669800-01 | Rice | nucleus | 17.27 | 21.37 |
| OQU77880 | Sorghum | nucleus | 22.74 | 20.7 |
| Bra033364.1-P | Field mustard | nucleus | 19.2 | 16.19 |
Protein Annotations
| EnsemblPlants:Bra007709.1 | EnsemblPlants:Bra007709.1-P | EnsemblPlantsGene:Bra007709 | Gene3D:3.30.40.100 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0008270 | InterPro:IPR011124 | InterPro:Znf_CW | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF14 | PFAM:PF07496 |
| PFscan:PS51050 | SEG:seg | UniParc:UPI0002542B3D | UniProt:M4CU15 | MapMan:35.2 | : |
Description
AT3G62900 (E=0.0) | zinc ion binding
Coordinates
chrA09:-:30489622..30494698
Molecular Weight (calculated)
141841.0 Da
IEP (calculated)
9.597
GRAVY (calculated)
-0.974
Length
1297 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEESELEEGE ACSYNTLNDF GGTIDPDNDL SYIDDKLQNI LGHFKKDFEG DFSAENLGAK FGGYGSFLPT YQRSPLWSHP KTPAKPQSSA GTRSPNILLG
0101: ESQSGNAASS TVPKKAKPGL ASSRIPKKSM KSKKPNSSSR QESETNKPGV FSKQNSLKLR IKMGSDNIST DNNAAAIKSG LGLDLSPSLS SDNNNSLSGS
0201: EGMNGDPQGC SPLESPTCIL NAMTSFPVDH YQLLSPLSDD LLRFIERETP QNGYKYMAKG VETQKAGEKQ SVEKKRRMVE TNVRSKKSVL DGIDVTVKEP
0301: TETNTSYPEN NERASSKLSD ASKENCNGSV KGETVGDVDR RTWDLTRHKD PKTGSAGSVR ENKKTNDDAS GHSRKVGIHK GSKAPDLVKK ETSAAKVKSG
0401: HKKRSDHIEQ ELRSSSKFKE HRSSKMNGQA EKKEVLAMKP KNDGKKTEDT YKDFFGDMED SAEEEEEQNC SMSEKGLPAL EDMPEKSSFT RAESQNVGPG
0501: RVASKLGSDP SLPKANPVVI QDNWVACDQC GKWRLLPYGV LPKDLPKKWM CTMLNWLPDA NYCHVPEDET TKALYALYQI PAPDSQASMQ SGLKPQGDDN
0601: TKKKKKGLRK IDNGTDREVS RNAETSKKTV LTSARNGNVH NSHGGSDLVD EERRKHKQKV KGNLSDESRS LKVNNKRKAD QESSMLAKKM KIESFLFPDE
0701: SEHCNVRPTS SSGVPAASAE RNSQPRVTTS KVPKEEGGGA SDTGNSNSTG GSKKRKLKES HGSRLYAGEG NHERKKARVL KEDKEPSFSH GSVKSEKKNT
0801: SHSRREHGHV AATSSSSKIS DSHKPRNSSH EAKCSPVESV TSSPMRISNL GKSASARKKK VDSSYGEGED DGGSDRSQTR TKDKHGSNES SVLDVWDNKG
0901: SLKAKERAQP SLDANFENGG EGKQPSDHQR HSNDSLAKKS GKGLSSRCKD KSINMSSESR DGPRQIDKKI HHDSPDGRVD TVARPNIPRP HDVERISERS
1001: NKADLASPSR PPSSRGVQGD PSIKATTQIR RRNEPSPSPL RKEVTSVQAG HNILKEAKDL KHTADRLKDS LSNLEFIELY FQACIKFLHG AFVLEMSSNE
1101: NASRQGETMA QSVHIYISTA NLCGFCAQEY EKSKDMGAAA LAYKCMEAAY MRVVNSSYIS VNRYRHELQT SLQMVPPGES PSSSASDVDN VNHPAGGADK
1201: VGNSRGISSP LVAGNHAISA QNRFNILRLL QFAQNVNLGM DASRKSRVAL AASVENLEEA QQQGEGILSI KSALDYNFQD LEGLLRLVKL AMKANNR
0101: ESQSGNAASS TVPKKAKPGL ASSRIPKKSM KSKKPNSSSR QESETNKPGV FSKQNSLKLR IKMGSDNIST DNNAAAIKSG LGLDLSPSLS SDNNNSLSGS
0201: EGMNGDPQGC SPLESPTCIL NAMTSFPVDH YQLLSPLSDD LLRFIERETP QNGYKYMAKG VETQKAGEKQ SVEKKRRMVE TNVRSKKSVL DGIDVTVKEP
0301: TETNTSYPEN NERASSKLSD ASKENCNGSV KGETVGDVDR RTWDLTRHKD PKTGSAGSVR ENKKTNDDAS GHSRKVGIHK GSKAPDLVKK ETSAAKVKSG
0401: HKKRSDHIEQ ELRSSSKFKE HRSSKMNGQA EKKEVLAMKP KNDGKKTEDT YKDFFGDMED SAEEEEEQNC SMSEKGLPAL EDMPEKSSFT RAESQNVGPG
0501: RVASKLGSDP SLPKANPVVI QDNWVACDQC GKWRLLPYGV LPKDLPKKWM CTMLNWLPDA NYCHVPEDET TKALYALYQI PAPDSQASMQ SGLKPQGDDN
0601: TKKKKKGLRK IDNGTDREVS RNAETSKKTV LTSARNGNVH NSHGGSDLVD EERRKHKQKV KGNLSDESRS LKVNNKRKAD QESSMLAKKM KIESFLFPDE
0701: SEHCNVRPTS SSGVPAASAE RNSQPRVTTS KVPKEEGGGA SDTGNSNSTG GSKKRKLKES HGSRLYAGEG NHERKKARVL KEDKEPSFSH GSVKSEKKNT
0801: SHSRREHGHV AATSSSSKIS DSHKPRNSSH EAKCSPVESV TSSPMRISNL GKSASARKKK VDSSYGEGED DGGSDRSQTR TKDKHGSNES SVLDVWDNKG
0901: SLKAKERAQP SLDANFENGG EGKQPSDHQR HSNDSLAKKS GKGLSSRCKD KSINMSSESR DGPRQIDKKI HHDSPDGRVD TVARPNIPRP HDVERISERS
1001: NKADLASPSR PPSSRGVQGD PSIKATTQIR RRNEPSPSPL RKEVTSVQAG HNILKEAKDL KHTADRLKDS LSNLEFIELY FQACIKFLHG AFVLEMSSNE
1101: NASRQGETMA QSVHIYISTA NLCGFCAQEY EKSKDMGAAA LAYKCMEAAY MRVVNSSYIS VNRYRHELQT SLQMVPPGES PSSSASDVDN VNHPAGGADK
1201: VGNSRGISSP LVAGNHAISA QNRFNILRLL QFAQNVNLGM DASRKSRVAL AASVENLEEA QQQGEGILSI KSALDYNFQD LEGLLRLVKL AMKANNR
0001: MEESELEEGE ACSYNITNEY AGSIDPDNDL SYIDEKLQHI LGHFQKDFEG GVSAENLGAK YGGYGSFLPT YQRSPVWSHP KTPAKPQSST GTRSPNNLLG
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
Arabidopsis Description
CW-type Zinc Finger [Source:UniProtKB/TrEMBL;Acc:F4IZK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.