Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400013673 | Potato | cytosol, plastid, vacuole | 6.67 | 67.5 |
| PGSC0003DMT400029537 | Potato | mitochondrion | 2.16 | 61.4 |
| VIT_14s0128g00910.t01 | Wine grape | cytosol | 3.15 | 54.26 |
| KRG96403 | Soybean | nucleus | 46.17 | 44.5 |
| KRH68140 | Soybean | nucleus | 45.25 | 43.87 |
| Bra007709.1-P | Field mustard | nucleus | 31.23 | 39.01 |
| CDY11456 | Canola | nucleus | 31.05 | 38.78 |
| AT3G62900.2 | Thale cress | nucleus | 33.46 | 38.63 |
| CDX67908 | Canola | nucleus | 31.11 | 38.5 |
| CDY25123 | Canola | nucleus | 31.23 | 38.3 |
| CDX76670 | Canola | nucleus | 30.31 | 38.21 |
| Bra003514.1-P | Field mustard | nucleus | 31.11 | 38.15 |
| Os05t0371100-00 | Rice | cytosol | 3.33 | 36.99 |
| Solyc09g074670.2.1 | Tomato | nucleus | 37.28 | 36.43 |
| GSMUA_Achr5P08000_001 | Banana | nucleus | 30.68 | 35.12 |
| VIT_05s0020g01570.t01 | Wine grape | cytosol, mitochondrion, plastid | 34.32 | 34.15 |
| VIT_14s0128g00900.t01 | Wine grape | nucleus | 25.86 | 31.98 |
| Solyc06g008720.2.1 | Tomato | nucleus | 24.69 | 31.45 |
| Os03t0347300-01 | Rice | cytosol, nucleus | 17.96 | 31.39 |
| GSMUA_Achr8P21920_001 | Banana | nucleus | 30.43 | 31.1 |
| OQU90452 | Sorghum | nucleus | 29.51 | 29.91 |
| KXG39393 | Sorghum | mitochondrion | 24.63 | 29.8 |
| Zm00001d022481_P019 | Maize | nucleus | 29.07 | 29.57 |
| GSMUA_Achr3P08980_001 | Banana | nucleus | 29.94 | 29.5 |
| TraesCS2D01G118500.1 | Wheat | nucleus | 28.58 | 29.3 |
| TraesCS2A01G116600.1 | Wheat | nucleus | 28.58 | 29.29 |
| TraesCS2B01G135800.1 | Wheat | nucleus | 28.46 | 29.16 |
| Zm00001d007121_P024 | Maize | nucleus | 27.84 | 28.33 |
| Os07t0669800-01 | Rice | nucleus | 18.21 | 28.15 |
| Zm00001d029134_P004 | Maize | mitochondrion | 23.52 | 27.91 |
| TraesCS1D01G235200.1 | Wheat | nucleus | 24.69 | 27.21 |
| TraesCS1B01G246700.4 | Wheat | nucleus | 24.51 | 27.19 |
| HORVU1Hr1G058250.1 | Barley | nucleus | 24.38 | 26.89 |
| TraesCS1A01G237200.3 | Wheat | nucleus | 24.44 | 26.85 |
| OQU77880 | Sorghum | nucleus | 23.21 | 26.39 |
| Zm00001d010490_P005 | Maize | nucleus | 23.15 | 26.37 |
Protein Annotations
| ArrayExpress:VIT_07s0104g01600 | EMBL:FN596005 | EnsemblPlants:VIT_07s0104g01600.t01 | EnsemblPlantsGene:VIT_07s0104g01600 | Gene3D:3.30.40.100 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0008270 | InterPro:IPR011124 | InterPro:Znf_CW | ncoils:Coil | PANTHER:PTHR23336 |
| PANTHER:PTHR23336:SF14 | PFAM:PF07496 | PFscan:PS51050 | ProteinID:CCB56755 | ProteinID:CCB56755.1 | SEG:seg |
| TIGR:TC61744 | unigene:Vvi.9962 | UniParc:UPI0002108844 | UniProt:F6HPZ9 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr7:-:2570030..2581734
Molecular Weight (calculated)
176866.0 Da
IEP (calculated)
7.611
GRAVY (calculated)
-0.847
Length
1620 amino acids
Sequence
(BLAST)
(BLAST)
0001: MISVGSRDGR KGLGLGFGVG REMEDTAELE EGEAYYYKDG DDDDGASIDP DVALSYIDEK LQDVLGHFQK DFEGGVSAEN LGAKFGGYGS FLPTYQRSPV
0101: WSQPRTPAKV QNCNTPRSPN NLLVEGGRHS SAVSSSAPSS VKLGATSASA GALPALKATS MSDSVKRDAY IASTRAEEFT SRESANKSAN QPDQKTLKVR
0201: IKVGSDNLSA RKNAEIYSGL GLDGSPSSSL ENSLSESDEL SRDPQDGPDE SPTSILQIMT SFPLLGDLLL SPLPDDLIHL TEKERLFRDT KSGPVHKSSR
0301: ESLVMFGSDS VRSDGKVSGE KKTKSVEKSS FSVDMKNGSS KEGQNGVGVI PKKEMDFDVL ACEELVSNAL KLPLLSNAFG DSTKGTGRAS DILRESNKGV
0401: VRDKLFSDTV QEELLEPIAN QEVGWVDKPN GKVSSSLKVW EDKKANSLND ASVYLRKDGN RKGEKTYNSI KADSNASKEG KVLNAELIEP PKLKAGQKAT
0501: PYEQDSVKLP SGKEHTSSGA KKNLVDNYTP KSELEDIKLR KEFGKPKDRY KDFFGDINLE QEENGIDSLE MPSDDRLKES DMPPTSGAYP KAATNTLPPT
0601: GNGPNSNAAP AAVAPVVIEE NWVCCDKCQK WRLLPIGINP DHLPEKWLCS MLSWLPGMNR CSISEEETTK ALIALYQAPA PESQHNLQSR ADSEISNATN
0701: HDGPTQFSNS LRKNLQTSVK SRSLNDVNQS PLANELDFQH LSKSSDLALE KQRLKQKEKH KPLECYSDGG DTKNSKMKNK SGTDQDCVRA SKKIKIEGMH
0801: STDEDWTSDH GGTNGKVHLS SSNGLPANVV SNNHFKHNDG SLNVGKYDSR DIVAKKRKVK ECQDTEIYSS SLPSTGHHLE DSGAFVKEEF SESDHRKEKK
0901: ARVSKSEGKE FIASKSSGRT DKKVSSMRTQ QQGQDLGSVL SQRSLDGVDS LKRDLGSVQP SVAVAATSSS SKVSGSHKTK TNFQEVRGSP VESVSSSPLR
1001: ISNPEKHTSV RRNLMGKDDS RDVGFFAMSP RRCSDGEDDG GSERSGAMRK NKIFTVTHRG SLDSSVLDFQ ERDFSHLSGS KVQVQPVPSP EFTNRHFLDA
1101: GADTLGQVPR YPSEPQASDR GRNEERKDNN HYRANGSRPK KSGKGSSSRS KDKNRSFKST CDEDKIKISD SFNESQNHMP SYEEKPRDAK NKFQEKFGSK
1201: SDRVEKNPVS KKDSAGKFST ETSKKDNHAK FGGHDSHDVK VEATCGQDEM STPKQDLLQE CDGERTSKRI LSEKTDRVEI VSGRGKLLPL PPSGAQNEML
1301: AHGSRPTPGS HKGNGADNLS VDASEGDEAL KVSKQIRKTD NQNGSLHTSS RHPTPNGHRI RDPDAPSPVR RDSSSQAATN AVKEAKDLKH LADRLKHSGS
1401: NLESMGFYFQ AALKFLHGAS LLESSNSENA KHEMIQSMQM YSSTAKLCEY CAHEYEKNKD MAAAALAYKC VEVAYMRVIY SSHNGANRDR HELQTALQMV
1501: PPGESPSSSA SDVDNLNHPV AVDKVAFAKG VGSPQVAGNH VIAAQKRPNF VRLLSFANDV NSAMEASRKS RLAFAAANAN LEETQHKEGI SSIKQALDYN
1601: FHDVEGLLRL VRLAMEAISR
0101: WSQPRTPAKV QNCNTPRSPN NLLVEGGRHS SAVSSSAPSS VKLGATSASA GALPALKATS MSDSVKRDAY IASTRAEEFT SRESANKSAN QPDQKTLKVR
0201: IKVGSDNLSA RKNAEIYSGL GLDGSPSSSL ENSLSESDEL SRDPQDGPDE SPTSILQIMT SFPLLGDLLL SPLPDDLIHL TEKERLFRDT KSGPVHKSSR
0301: ESLVMFGSDS VRSDGKVSGE KKTKSVEKSS FSVDMKNGSS KEGQNGVGVI PKKEMDFDVL ACEELVSNAL KLPLLSNAFG DSTKGTGRAS DILRESNKGV
0401: VRDKLFSDTV QEELLEPIAN QEVGWVDKPN GKVSSSLKVW EDKKANSLND ASVYLRKDGN RKGEKTYNSI KADSNASKEG KVLNAELIEP PKLKAGQKAT
0501: PYEQDSVKLP SGKEHTSSGA KKNLVDNYTP KSELEDIKLR KEFGKPKDRY KDFFGDINLE QEENGIDSLE MPSDDRLKES DMPPTSGAYP KAATNTLPPT
0601: GNGPNSNAAP AAVAPVVIEE NWVCCDKCQK WRLLPIGINP DHLPEKWLCS MLSWLPGMNR CSISEEETTK ALIALYQAPA PESQHNLQSR ADSEISNATN
0701: HDGPTQFSNS LRKNLQTSVK SRSLNDVNQS PLANELDFQH LSKSSDLALE KQRLKQKEKH KPLECYSDGG DTKNSKMKNK SGTDQDCVRA SKKIKIEGMH
0801: STDEDWTSDH GGTNGKVHLS SSNGLPANVV SNNHFKHNDG SLNVGKYDSR DIVAKKRKVK ECQDTEIYSS SLPSTGHHLE DSGAFVKEEF SESDHRKEKK
0901: ARVSKSEGKE FIASKSSGRT DKKVSSMRTQ QQGQDLGSVL SQRSLDGVDS LKRDLGSVQP SVAVAATSSS SKVSGSHKTK TNFQEVRGSP VESVSSSPLR
1001: ISNPEKHTSV RRNLMGKDDS RDVGFFAMSP RRCSDGEDDG GSERSGAMRK NKIFTVTHRG SLDSSVLDFQ ERDFSHLSGS KVQVQPVPSP EFTNRHFLDA
1101: GADTLGQVPR YPSEPQASDR GRNEERKDNN HYRANGSRPK KSGKGSSSRS KDKNRSFKST CDEDKIKISD SFNESQNHMP SYEEKPRDAK NKFQEKFGSK
1201: SDRVEKNPVS KKDSAGKFST ETSKKDNHAK FGGHDSHDVK VEATCGQDEM STPKQDLLQE CDGERTSKRI LSEKTDRVEI VSGRGKLLPL PPSGAQNEML
1301: AHGSRPTPGS HKGNGADNLS VDASEGDEAL KVSKQIRKTD NQNGSLHTSS RHPTPNGHRI RDPDAPSPVR RDSSSQAATN AVKEAKDLKH LADRLKHSGS
1401: NLESMGFYFQ AALKFLHGAS LLESSNSENA KHEMIQSMQM YSSTAKLCEY CAHEYEKNKD MAAAALAYKC VEVAYMRVIY SSHNGANRDR HELQTALQMV
1501: PPGESPSSSA SDVDNLNHPV AVDKVAFAKG VGSPQVAGNH VIAAQKRPNF VRLLSFANDV NSAMEASRKS RLAFAAANAN LEETQHKEGI SSIKQALDYN
1601: FHDVEGLLRL VRLAMEAISR
0001: MEESELEEGE ACSYNITNEY AGSIDPDNDL SYIDEKLQHI LGHFQKDFEG GVSAENLGAK YGGYGSFLPT YQRSPVWSHP KTPAKPQSST GTRSPNNLLG
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
Arabidopsis Description
CW-type Zinc Finger [Source:UniProtKB/TrEMBL;Acc:F4IZK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.