Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0347300-01 | Rice | cytosol, nucleus | 18.93 | 26.75 |
| VIT_07s0104g01600.t01 | Wine grape | nucleus | 31.98 | 25.86 |
| VIT_05s0020g01570.t01 | Wine grape | cytosol, mitochondrion, plastid | 28.93 | 23.28 |
| GSMUA_Achr5P08000_001 | Banana | nucleus | 22.82 | 21.13 |
| TraesCS2D01G118500.1 | Wheat | nucleus | 24.43 | 20.25 |
| TraesCS2A01G116600.1 | Wheat | nucleus | 24.43 | 20.24 |
| TraesCS2B01G135800.1 | Wheat | nucleus | 24.35 | 20.18 |
| KXG39393 | Sorghum | mitochondrion | 20.61 | 20.16 |
| OQU90452 | Sorghum | nucleus | 24.05 | 19.71 |
| Zm00001d022481_P019 | Maize | nucleus | 23.89 | 19.65 |
| GSMUA_Achr3P08980_001 | Banana | nucleus | 24.5 | 19.53 |
| Zm00001d029134_P004 | Maize | mitochondrion | 19.69 | 18.9 |
| GSMUA_Achr8P21920_001 | Banana | nucleus | 22.82 | 18.86 |
| Zm00001d007121_P024 | Maize | nucleus | 22.9 | 18.84 |
| OQU77880 | Sorghum | nucleus | 19.77 | 18.18 |
| Zm00001d010490_P005 | Maize | nucleus | 19.62 | 18.07 |
| TraesCS1D01G235200.1 | Wheat | nucleus | 19.92 | 17.76 |
| TraesCS1B01G246700.4 | Wheat | nucleus | 19.62 | 17.6 |
| HORVU1Hr1G058250.1 | Barley | nucleus | 19.62 | 17.49 |
| TraesCS1A01G237200.3 | Wheat | nucleus | 19.69 | 17.49 |
| Os07t0669800-01 | Rice | nucleus | 12.06 | 15.08 |
| VIT_14s0128g00910.t01 | Wine grape | cytosol | 1.07 | 14.89 |
| Os05t0371100-00 | Rice | cytosol | 0.99 | 8.9 |
Protein Annotations
| EntrezGene:100244214 | wikigene:100244214 | Gene3D:3.30.40.100 | MapMan:35.2 | ProteinID:CCB59933 | ProteinID:CCB59933.1 |
| ncoils:Coil | UniProt:F6HZ18 | EMBL:FN596501 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 |
| InterPro:IPR011124 | EntrezGene:LOC100244214 | wikigene:LOC100244214 | PFAM:PF07496 | PFscan:PS51050 | PANTHER:PTHR23336 |
| PANTHER:PTHR23336:SF14 | TIGR:TC60561 | UniParc:UPI000210A253 | ArrayExpress:VIT_14s0128g00900 | EnsemblPlantsGene:VIT_14s0128g00900 | EnsemblPlants:VIT_14s0128g00900.t01 |
| RefSeq:XP_002280546 | RefSeq:XP_002280546.2 | InterPro:Znf_CW | SEG:seg | : | : |
Description
No Description!
Coordinates
chr14:-:3447907..3462115
Molecular Weight (calculated)
144310.0 Da
IEP (calculated)
9.530
GRAVY (calculated)
-0.825
Length
1310 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTELEDESYE DPSNGTNTHL KKGDAETLTG DSLKVLYPSK GNGKVNGVKE GPVKASEINK SVVKDSSNLE KEEALELASI VEASRTDKWN AKTSLVERVQ
0101: KDKKAGRIIT NGGGPKGESS YDLFKENCDI PEGKKDFNGG ASGPPRKKFD QKAKSPLQDG MRIPLGKEQP ASSCKKKSKG SQRKGTSALE LTRESLRVDS
0201: SAAPEDMVAH RKYVPYKSNR DDIKSQKDLM KVKESQAHLI GKEKLEKKEI RMDPLETSVK EKNSSKLRVA MKETCASSDK LKERSGGKKS SCPSTFEAHQ
0301: EVSKTSALTG NGSISGALPT EVAPVVIQEN WVCCDKCHKW RLLPYGENPN CLPKKWLCSM LYWLPGMNRC SVSEEETTNA LNALYQVPVP VPEVQTIQPV
0401: HTHGAASGAT LADARNLGQN HQYHSFDAAS SGGKTKHGTK PVSNVARHSS FMNLSNSSSD QLASTKRSLK HVDKSPLEFN TEERSGDAKL VKMKCKREAD
0501: QDGFRVSKKI KTKGMHYIDG DQSRGRLEPE IDTQKHNEYS SSRDSKAVTK KLKNQVKKSV TMEEQNKRYV AGKKKKLMDW QDSQFSLETV PSNGHQSEAK
0601: WIVEKQNSGS EHGKGKKPRR SELERKESIA SIPDGKPNRK GTVARILLSS RKDDPVDGNS SYEEGKSTEK DQPLAQSHGN NLSRQAIDCK TSSRRDLPFR
0701: QPPTAATSSS SKISSSCKVK VNSQEVKGSP VESVSSSPLR MSSRENFRTN LLGKDDATGA DFFLMNNPRS CSEAEGDGEN VVSGRARKEK AFSSNHQRSM
0801: KSSLFDYQDR ITDHKTHGKV KVCTVHPSKL PNTQLVNSSI DNYEQDKERV NNLHFHNGSV PENFGKVFSS QAKEKHLTSK SGSNRGKIKA SDSHKEQKEL
0901: FLAKSVKYEM ENEFNDNAPH KEEMRDMKFK IEGGYGIKSD KAEKNCVGKK VSAGKRASES CKIEKQTKFE EHDNLHGKSN TICQKDGGST MQQNRKVEKS
1001: LKCLSADSTD QVEVASGKSD AAKAAKQHGE SEGLNGIHVG SRDPTPNRHG ARDIVAPNPV KQGTSIRAAR NALKEAKNLK HLADRLKISG SGLESTELFF
1101: QAALKFLYGA TLLELCNSEG VSCGEMSSIE VFNSTAKLCE YCAHEFERWK SMAFAALSYK CMEVAYMQVV YSTDSIASRD RNELQMALEM VLPVESPSSS
1201: ASGVDNLNNQ AAIDKMDIPK DASSQVMGNH VIAARNRPNF VRLLDFAQIV SFAMEASWKS QNAFAAANVV LAEAGNEEGI SSVKRVLDFS FHDVDGFLRL
1301: VRLAMEALAP
0101: KDKKAGRIIT NGGGPKGESS YDLFKENCDI PEGKKDFNGG ASGPPRKKFD QKAKSPLQDG MRIPLGKEQP ASSCKKKSKG SQRKGTSALE LTRESLRVDS
0201: SAAPEDMVAH RKYVPYKSNR DDIKSQKDLM KVKESQAHLI GKEKLEKKEI RMDPLETSVK EKNSSKLRVA MKETCASSDK LKERSGGKKS SCPSTFEAHQ
0301: EVSKTSALTG NGSISGALPT EVAPVVIQEN WVCCDKCHKW RLLPYGENPN CLPKKWLCSM LYWLPGMNRC SVSEEETTNA LNALYQVPVP VPEVQTIQPV
0401: HTHGAASGAT LADARNLGQN HQYHSFDAAS SGGKTKHGTK PVSNVARHSS FMNLSNSSSD QLASTKRSLK HVDKSPLEFN TEERSGDAKL VKMKCKREAD
0501: QDGFRVSKKI KTKGMHYIDG DQSRGRLEPE IDTQKHNEYS SSRDSKAVTK KLKNQVKKSV TMEEQNKRYV AGKKKKLMDW QDSQFSLETV PSNGHQSEAK
0601: WIVEKQNSGS EHGKGKKPRR SELERKESIA SIPDGKPNRK GTVARILLSS RKDDPVDGNS SYEEGKSTEK DQPLAQSHGN NLSRQAIDCK TSSRRDLPFR
0701: QPPTAATSSS SKISSSCKVK VNSQEVKGSP VESVSSSPLR MSSRENFRTN LLGKDDATGA DFFLMNNPRS CSEAEGDGEN VVSGRARKEK AFSSNHQRSM
0801: KSSLFDYQDR ITDHKTHGKV KVCTVHPSKL PNTQLVNSSI DNYEQDKERV NNLHFHNGSV PENFGKVFSS QAKEKHLTSK SGSNRGKIKA SDSHKEQKEL
0901: FLAKSVKYEM ENEFNDNAPH KEEMRDMKFK IEGGYGIKSD KAEKNCVGKK VSAGKRASES CKIEKQTKFE EHDNLHGKSN TICQKDGGST MQQNRKVEKS
1001: LKCLSADSTD QVEVASGKSD AAKAAKQHGE SEGLNGIHVG SRDPTPNRHG ARDIVAPNPV KQGTSIRAAR NALKEAKNLK HLADRLKISG SGLESTELFF
1101: QAALKFLYGA TLLELCNSEG VSCGEMSSIE VFNSTAKLCE YCAHEFERWK SMAFAALSYK CMEVAYMQVV YSTDSIASRD RNELQMALEM VLPVESPSSS
1201: ASGVDNLNNQ AAIDKMDIPK DASSQVMGNH VIAARNRPNF VRLLDFAQIV SFAMEASWKS QNAFAAANVV LAEAGNEEGI SSVKRVLDFS FHDVDGFLRL
1301: VRLAMEALAP
0001: MEESELEEGE ACSYNITNEY AGSIDPDNDL SYIDEKLQHI LGHFQKDFEG GVSAENLGAK YGGYGSFLPT YQRSPVWSHP KTPAKPQSST GTRSPNNLLG
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
Arabidopsis Description
CW-type Zinc Finger [Source:UniProtKB/TrEMBL;Acc:F4IZK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.