Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003514.1-P | Field mustard | nucleus | 96.18 | 95.31 |
| CDY25123 | Canola | nucleus | 88.08 | 87.28 |
| CDY11456 | Canola | nucleus | 65.62 | 66.23 |
| CDX76670 | Canola | nucleus | 64.86 | 66.07 |
| AT3G62900.2 | Thale cress | nucleus | 67.53 | 63.01 |
| PGSC0003DMT400013673 | Potato | cytosol, plastid, vacuole | 7.41 | 60.62 |
| PGSC0003DMT400029537 | Potato | mitochondrion | 1.99 | 45.61 |
| Os05t0371100-00 | Rice | cytosol | 3.9 | 34.93 |
| VIT_07s0104g01600.t01 | Wine grape | nucleus | 38.5 | 31.11 |
| CDY18138 | Canola | nucleus | 21.16 | 29.1 |
| CDX89924 | Canola | nucleus | 20.78 | 28.39 |
| CDY37451 | Canola | nucleus | 22.38 | 28.25 |
| KRH68140 | Soybean | nucleus | 35.83 | 28.07 |
| KRG96403 | Soybean | nucleus | 35.68 | 27.78 |
| CDY32489 | Canola | nucleus | 22.69 | 27.63 |
| CDY54298 | Canola | nucleus | 18.03 | 25.11 |
| Solyc09g074670.2.1 | Tomato | nucleus | 31.7 | 25.03 |
| Solyc06g008720.2.1 | Tomato | nucleus | 24.14 | 24.84 |
| CDY66331 | Canola | nucleus | 17.72 | 24.79 |
| GSMUA_Achr5P08000_001 | Banana | nucleus | 26.74 | 24.73 |
| KXG39393 | Sorghum | mitochondrion | 24.14 | 23.6 |
| Os03t0347300-01 | Rice | cytosol, nucleus | 16.65 | 23.52 |
| GSMUA_Achr8P21920_001 | Banana | nucleus | 27.81 | 22.97 |
| TraesCS1B01G246700.4 | Wheat | nucleus | 24.9 | 22.33 |
| TraesCS1D01G235200.1 | Wheat | nucleus | 24.83 | 22.11 |
| Zm00001d029134_P004 | Maize | mitochondrion | 22.99 | 22.05 |
| GSMUA_Achr3P08980_001 | Banana | nucleus | 27.65 | 22.02 |
| TraesCS1A01G237200.3 | Wheat | nucleus | 24.6 | 21.83 |
| Zm00001d022481_P019 | Maize | nucleus | 26.28 | 21.59 |
| HORVU1Hr1G058250.1 | Barley | nucleus | 24.14 | 21.51 |
| TraesCS2A01G116600.1 | Wheat | nucleus | 25.9 | 21.44 |
| TraesCS2B01G135800.1 | Wheat | nucleus | 25.9 | 21.44 |
| OQU90452 | Sorghum | nucleus | 26.13 | 21.4 |
| TraesCS2D01G118500.1 | Wheat | nucleus | 25.82 | 21.39 |
| Zm00001d007121_P024 | Maize | nucleus | 25.97 | 21.36 |
| Os07t0669800-01 | Rice | nucleus | 16.65 | 20.8 |
| Zm00001d010490_P005 | Maize | nucleus | 22.46 | 20.68 |
| OQU77880 | Sorghum | nucleus | 22.31 | 20.49 |
Protein Annotations
| EnsemblPlants:CDX67908 | EnsemblPlantsGene:GSBRNA2T00099116001 | Gene3D:3.30.40.100 | GO:A0A078BYA5 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0008270 | InterPro:IPR011124 | InterPro:Znf_CW | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF14 | PFAM:PF07496 |
| PFscan:PS51050 | ProteinID:CDX67908 | ProteinID:CDX67908.1 | SEG:seg | UniParc:UPI0004EF41B7 | MapMan:35.2 |
Description
BnaA07g19480D
Coordinates
chrLK031787:-:2831545..2837082
Molecular Weight (calculated)
143198.0 Da
IEP (calculated)
9.668
GRAVY (calculated)
-0.992
Length
1309 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEESELEEGE ACSYNLTNDF GSSFDPDNDL SYIDHKLQNI LGHFQKDFEG DFSAENLGAK FGGYGSFLPT YQRSPLWSYP KAPAKPQSSA GTRSPNILPG
0101: ESQSGNAASS SLPKKATSEL ASYRIPQKST KSKKPNSSSR HESATEKPGV FSKQNSLKLR IKMGADSLPA EKNAAAIYSG LGLDVSPNSV SGSEGMSGEP
0201: QGYSPLESPA NILNVMTSLP VDPCQLLSPL SDDLIRFIER EKPEKGYKRT SPSRLFIESS SAMANRLEPQ KGGEDPSVEK KRKMLERNNL SAEASVRSKK
0301: GLLDGNDGSV KKPTETNTSY PSATEKETAS SKLFDASKEN YNGSLKGEME VGEYKGSKAL EPPHHENPKT SSAGSVRGDK KNRFGDDDAS GRSRKEYKGG
0401: KAPELVKKET EAEKLKSGHK EHSSRKQKSD QIEREPQSSS KFSKQKSSVV NETKMNGQAE KKEVAALKPH NGGKKAEDTY KDFFGDMEDS EEEEEPPTLE
0501: DTPEKSRVPV TESQNVGPGP SVGKLGSDPS LPKANPVVIE EHWVACDKCG QWRLLPFGPV PKLPEKWMCT MLDWLPGANY CDVPEDETTK AVYAMYQIPA
0601: PDSQAPVQSG LKPQFNQGED NTKKKRKGFK KLDNGMVKEG SRTAETSKKS ILTSARNGTM HNSHGLSDFA DEERQKHKQK ERGKAVDHHS DHDSRSLKMN
0701: NKRNAERESS MLAKKMKIES FLFPDEGGAS DSGVPVASAD KKHKPRVSSK MPKEEGGGAS DTGNSNSTGG SKKRKLKESH GSPRVYREKE NHERKKARVL
0801: KEGKEPSFSH GSGKSEKKNK SHSRREYGHV AATSSSSHKP RNSSHEVKSS PVESVSSSPM RKKKVESHDT DFLAASSMRR FSDGEGDGGS DRSQTRRKNK
0901: HGSRESPVLD VCDNKGSLKA KVRAEPSLDA NLENGGHKDH IHRRSNDSLA KKSGKGSSSR DGPRHIEKKI NDGSSPDMVV KPNIPKPYDV ERVSERSNRA
1001: DLTSPSRPPS RGDSSRKKVE KCGTSAGNNS IQADDVTKAT AQVRRRNEPS PSPLRKEVTS VQAAHGILKE AKDLKHTADR LKSSISNLEF IELYFQACLK
1101: FLHGAFLLET SSNESARQGE TMIHSTSIYS STANLCGFCA REYEKSKEMG AAALAYKCME AGYMRVLNSS YTSANRYRNE LQTSLQIVPP GESPSSSASD
1201: VDNVNNPAAV DRVGNSRCTS SPLVAGNHVI SAQNRSNILR IIQFAQNVNL AMDASRKSRV ALAASIENLG EDQQQGEGVL SIKSTLDYNF QDLEGLLRLV
1301: KLAMKANNR
0101: ESQSGNAASS SLPKKATSEL ASYRIPQKST KSKKPNSSSR HESATEKPGV FSKQNSLKLR IKMGADSLPA EKNAAAIYSG LGLDVSPNSV SGSEGMSGEP
0201: QGYSPLESPA NILNVMTSLP VDPCQLLSPL SDDLIRFIER EKPEKGYKRT SPSRLFIESS SAMANRLEPQ KGGEDPSVEK KRKMLERNNL SAEASVRSKK
0301: GLLDGNDGSV KKPTETNTSY PSATEKETAS SKLFDASKEN YNGSLKGEME VGEYKGSKAL EPPHHENPKT SSAGSVRGDK KNRFGDDDAS GRSRKEYKGG
0401: KAPELVKKET EAEKLKSGHK EHSSRKQKSD QIEREPQSSS KFSKQKSSVV NETKMNGQAE KKEVAALKPH NGGKKAEDTY KDFFGDMEDS EEEEEPPTLE
0501: DTPEKSRVPV TESQNVGPGP SVGKLGSDPS LPKANPVVIE EHWVACDKCG QWRLLPFGPV PKLPEKWMCT MLDWLPGANY CDVPEDETTK AVYAMYQIPA
0601: PDSQAPVQSG LKPQFNQGED NTKKKRKGFK KLDNGMVKEG SRTAETSKKS ILTSARNGTM HNSHGLSDFA DEERQKHKQK ERGKAVDHHS DHDSRSLKMN
0701: NKRNAERESS MLAKKMKIES FLFPDEGGAS DSGVPVASAD KKHKPRVSSK MPKEEGGGAS DTGNSNSTGG SKKRKLKESH GSPRVYREKE NHERKKARVL
0801: KEGKEPSFSH GSGKSEKKNK SHSRREYGHV AATSSSSHKP RNSSHEVKSS PVESVSSSPM RKKKVESHDT DFLAASSMRR FSDGEGDGGS DRSQTRRKNK
0901: HGSRESPVLD VCDNKGSLKA KVRAEPSLDA NLENGGHKDH IHRRSNDSLA KKSGKGSSSR DGPRHIEKKI NDGSSPDMVV KPNIPKPYDV ERVSERSNRA
1001: DLTSPSRPPS RGDSSRKKVE KCGTSAGNNS IQADDVTKAT AQVRRRNEPS PSPLRKEVTS VQAAHGILKE AKDLKHTADR LKSSISNLEF IELYFQACLK
1101: FLHGAFLLET SSNESARQGE TMIHSTSIYS STANLCGFCA REYEKSKEMG AAALAYKCME AGYMRVLNSS YTSANRYRNE LQTSLQIVPP GESPSSSASD
1201: VDNVNNPAAV DRVGNSRCTS SPLVAGNHVI SAQNRSNILR IIQFAQNVNL AMDASRKSRV ALAASIENLG EDQQQGEGVL SIKSTLDYNF QDLEGLLRLV
1301: KLAMKANNR
0001: MEESELEEGE ACSYNITNEY AGSIDPDNDL SYIDEKLQHI LGHFQKDFEG GVSAENLGAK YGGYGSFLPT YQRSPVWSHP KTPAKPQSST GTRSPNNLLG
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
Arabidopsis Description
CW-type Zinc Finger [Source:UniProtKB/TrEMBL;Acc:F4IZK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.