Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67908 | Canola | nucleus | 87.28 | 88.08 |
| CDX76670 | Canola | nucleus | 63.97 | 65.76 |
| CDY11456 | Canola | nucleus | 63.59 | 64.76 |
| AT3G62900.2 | Thale cress | nucleus | 67.9 | 63.93 |
| PGSC0003DMT400013673 | Potato | cytosol, plastid, vacuole | 7.34 | 60.62 |
| PGSC0003DMT400029537 | Potato | mitochondrion | 1.97 | 45.61 |
| Os05t0371100-00 | Rice | cytosol | 3.86 | 34.93 |
| VIT_07s0104g01600.t01 | Wine grape | nucleus | 38.3 | 31.23 |
| CDY18138 | Canola | nucleus | 20.82 | 28.89 |
| CDX89924 | Canola | nucleus | 20.67 | 28.5 |
| CDY37451 | Canola | nucleus | 21.95 | 27.97 |
| KRH68140 | Soybean | nucleus | 35.35 | 27.95 |
| KRG96403 | Soybean | nucleus | 35.35 | 27.78 |
| CDY32489 | Canola | nucleus | 22.56 | 27.72 |
| CDY54298 | Canola | nucleus | 18.47 | 25.96 |
| Solyc09g074670.2.1 | Tomato | nucleus | 32.25 | 25.69 |
| CDY66331 | Canola | nucleus | 18.09 | 25.53 |
| GSMUA_Achr5P08000_001 | Banana | nucleus | 26.87 | 25.09 |
| Solyc06g008720.2.1 | Tomato | nucleus | 23.69 | 24.61 |
| Os03t0347300-01 | Rice | cytosol, nucleus | 16.81 | 23.95 |
| KXG39393 | Sorghum | mitochondrion | 23.62 | 23.3 |
| GSMUA_Achr8P21920_001 | Banana | nucleus | 27.33 | 22.78 |
| Zm00001d029134_P004 | Maize | mitochondrion | 22.86 | 22.12 |
| TraesCS1B01G246700.4 | Wheat | nucleus | 24.45 | 22.12 |
| TraesCS1D01G235200.1 | Wheat | nucleus | 24.45 | 21.97 |
| GSMUA_Achr3P08980_001 | Banana | nucleus | 26.95 | 21.65 |
| TraesCS1A01G237200.3 | Wheat | nucleus | 24.15 | 21.63 |
| Zm00001d022481_P019 | Maize | nucleus | 25.81 | 21.41 |
| TraesCS2B01G135800.1 | Wheat | nucleus | 25.59 | 21.38 |
| HORVU1Hr1G058250.1 | Barley | nucleus | 23.77 | 21.38 |
| Zm00001d007121_P024 | Maize | nucleus | 25.74 | 21.36 |
| TraesCS2D01G118500.1 | Wheat | nucleus | 25.51 | 21.33 |
| TraesCS2A01G116600.1 | Wheat | nucleus | 25.51 | 21.32 |
| Zm00001d010490_P005 | Maize | nucleus | 22.94 | 21.31 |
| OQU77880 | Sorghum | nucleus | 22.94 | 21.26 |
| OQU90452 | Sorghum | nucleus | 25.59 | 21.15 |
| Os07t0669800-01 | Rice | nucleus | 16.12 | 20.32 |
Protein Annotations
| EnsemblPlants:CDY25123 | EnsemblPlantsGene:GSBRNA2T00028997001 | Gene3D:3.30.40.100 | GO:A0A078GKL3 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0008270 | InterPro:IPR011124 | InterPro:Znf_CW | ncoils:Coil | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF14 |
| PFAM:PF07496 | PFscan:PS51050 | ProteinID:CDY25123 | ProteinID:CDY25123.1 | SEG:seg | UniParc:UPI0004EB529C |
| UniProt:A0A078GKL3 | MapMan:35.2 | : | : | : | : |
Description
BnaC06g18650DBnaC06g18650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GKL3]
Coordinates
chrLK032168:-:566143..572593
Molecular Weight (calculated)
144615.0 Da
IEP (calculated)
9.696
GRAVY (calculated)
-0.990
Length
1321 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEESELEEGE ACSYNLTNDF GSSFDPDNDL SYIDHKLQNI LGHFQKDFEG DFSAENLGAK FGGYGSFLPT YQRSPLWSYP KAPAKPQSSA GTRSPNILPG
0101: ESQSGNAASS SLPKTAKSEL TSSRIPQKSV KSKKPNSSSR HESATKKPGV FSKQNSLKLR IKMGSDSLPA EKNAAAIYSG LGLDVSPNSV SGSEGMSGEP
0201: QGYSPLESPT NILNVMTSLP VDPCQLLSPL SNDLIRFIER EKPEKGYKRT SPSRLFIESY SAMANRPEPQ KAGENLSLEK NRKMLERNNL SAEASVRSKK
0301: GLLDGNDGSV KKPTETNTSY PSGTEKETAS SKLFDASKEN YNGSLKGDME VGEYKGSKAL EPPHHENPKT SSAGSVRGDK KNRFGDDDAS GRSRKEYKGS
0401: VAPELVKKET EASKLKSGHK EHSSRKQKSD QIEREPQSSS KFSKQKSSVV NETKMNGQSE KKEVAALKPH NGGKKAEDTY KDFFGDIDDS EEEVEPPTLE
0501: DTPEKSRVPV TESQNVGPGP SLGKLGSDPS LPKANPVVIE EHWVACDKCG QWRLLPFGPV PKLPEKWMCT MLDWLPGANY CDVPEDETTK AVYAMYQIPA
0601: PDSQAPVQSN PSGLKPQFNQ GDNNTKKKRK GFKKLDNGMV KEGSRTEETS KKSILTSARN GIMHNSHGLK DVAEEERQKH KHKERGKAVD HHSDHDSRSL
0701: KMNNKRNADQ ESSMLAKKMK IESFPFPDEG GASDSGVPVA SADKKHKPRV SSKMPKEEGG ASDTGNSNST GGSRKRKLKE SHGSPRVYRE NENHERKKAR
0801: VLKGEKEPSF SHGSGKSEKK NKSHSRREYG HVAATSSSSH KPRNSSHEVK SSPVESVSSS PMRKKKVDSH DTDFLAASTM RRFSDGEGDG GSDRSQTRTK
0901: NKHGFHESSV LDVCDNKGSL KAKVRAEPSL DANLENGGHK DHIHGEGKKS SDHHRRSNDS LAKKSGKGSS SRDGPRHIEK KINDGSSPDM VVKPNIPKPY
1001: DVERVSERSN RADLTSPSRP PSRGDFSRKK VEKCGTSAGN NSIQADDVTK ATAQVRRRNE PSPSPLRKEV TSVQAAHNIL KEAKDLKHTA DRLKSSISNL
1101: EFIELYFQAC LKFLHGAFLL ETSSNESARQ GETMIHSTSI YSSTANLCGF CAREYEKSKE MGAAALAYKC MEAGYMRVLN SSYTSANRYR NELQTSLQIV
1201: PPGESPSSSA SDVDNVNNPA AVDRVGNSRC TSSPLVAGNH VISAQNRSNI LRIIQFAQNV NLAMDASRKS RVALAASIEN LGEDQQHGEG VLSIKSTLDY
1301: NFQDLEGLLR LVKLAMKANN R
0101: ESQSGNAASS SLPKTAKSEL TSSRIPQKSV KSKKPNSSSR HESATKKPGV FSKQNSLKLR IKMGSDSLPA EKNAAAIYSG LGLDVSPNSV SGSEGMSGEP
0201: QGYSPLESPT NILNVMTSLP VDPCQLLSPL SNDLIRFIER EKPEKGYKRT SPSRLFIESY SAMANRPEPQ KAGENLSLEK NRKMLERNNL SAEASVRSKK
0301: GLLDGNDGSV KKPTETNTSY PSGTEKETAS SKLFDASKEN YNGSLKGDME VGEYKGSKAL EPPHHENPKT SSAGSVRGDK KNRFGDDDAS GRSRKEYKGS
0401: VAPELVKKET EASKLKSGHK EHSSRKQKSD QIEREPQSSS KFSKQKSSVV NETKMNGQSE KKEVAALKPH NGGKKAEDTY KDFFGDIDDS EEEVEPPTLE
0501: DTPEKSRVPV TESQNVGPGP SLGKLGSDPS LPKANPVVIE EHWVACDKCG QWRLLPFGPV PKLPEKWMCT MLDWLPGANY CDVPEDETTK AVYAMYQIPA
0601: PDSQAPVQSN PSGLKPQFNQ GDNNTKKKRK GFKKLDNGMV KEGSRTEETS KKSILTSARN GIMHNSHGLK DVAEEERQKH KHKERGKAVD HHSDHDSRSL
0701: KMNNKRNADQ ESSMLAKKMK IESFPFPDEG GASDSGVPVA SADKKHKPRV SSKMPKEEGG ASDTGNSNST GGSRKRKLKE SHGSPRVYRE NENHERKKAR
0801: VLKGEKEPSF SHGSGKSEKK NKSHSRREYG HVAATSSSSH KPRNSSHEVK SSPVESVSSS PMRKKKVDSH DTDFLAASTM RRFSDGEGDG GSDRSQTRTK
0901: NKHGFHESSV LDVCDNKGSL KAKVRAEPSL DANLENGGHK DHIHGEGKKS SDHHRRSNDS LAKKSGKGSS SRDGPRHIEK KINDGSSPDM VVKPNIPKPY
1001: DVERVSERSN RADLTSPSRP PSRGDFSRKK VEKCGTSAGN NSIQADDVTK ATAQVRRRNE PSPSPLRKEV TSVQAAHNIL KEAKDLKHTA DRLKSSISNL
1101: EFIELYFQAC LKFLHGAFLL ETSSNESARQ GETMIHSTSI YSSTANLCGF CAREYEKSKE MGAAALAYKC MEAGYMRVLN SSYTSANRYR NELQTSLQIV
1201: PPGESPSSSA SDVDNVNNPA AVDRVGNSRC TSSPLVAGNH VISAQNRSNI LRIIQFAQNV NLAMDASRKS RVALAASIEN LGEDQQHGEG VLSIKSTLDY
1301: NFQDLEGLLR LVKLAMKANN R
0001: MEESELEEGE ACSYNITNEY AGSIDPDNDL SYIDEKLQHI LGHFQKDFEG GVSAENLGAK YGGYGSFLPT YQRSPVWSHP KTPAKPQSST GTRSPNNLLG
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
0101: ESQSGNAASS SVPKKAKSGL ASSGNPKKSV KSKKPSSSAR MESATKKPCV FSKQNSLKLR IKMVPDGLST EKNAAAIYSG LGLDVSPSLS LDNNSLSGSE
0201: GMNEEPQGYS PTESPTSILN VMTSLPVDHC QFLSPLSEDL IRFIEREKSE KGYKYTSPSR LFTASSSAMA YGLEPQKSGE KPSVEKKKKM VERSSFSAET
0301: NVRSKKGLFD STDAITKESM ETNTLYPTFA EKETASSKLF DASKENYNGT VRGEMVGDVD RRLWGLTRHK DLGAHHENPK TISAGSVRED KKAKLGDNEA
0401: SGYPRKVGKY KGSKASDSVK KESSASKAKS GHKVELEHPL RKQKYDQIEQ EPPSSSKFKE QQTSVVFETK LNGQAEKKEV VAVKPQSDSK KAEDTYKDFF
0501: GDIGDSEEEE EQDVKDLRIS EKGLPPLEDM PEKSSLPLVE PQNVGPEPML RKLGSDASLP KANPVIIQEH WVACDKCGKW RLLPFGVFPE DLPEKWMCTM
0601: LNWLPGVNYC NVPEDETTKA LYAMYQIPVP ENQASMQSNP SGPKPQFTQG DDNTKKKKKG FKKIDNGMDK EGARTAETNK TIQTSSRNGI QNSQGLGDLA
0701: EDERQIHKQK EKGKAVDHLS DESKSLKANN KRKTDLESSM LAKKMKIESF LFPDESEYGN GRPTSSSGVP ITSADIKPKP RVSSKMPKEE GGASDTGNSN
0801: STGGIKKRKL RESHGSRIYS ENENHERKKA RVRKEEKEPS YSQGNGKLEK KNRSHSKIEY ANVQNSIAAT SSSSKISDSH KPRNSSREAK CSPVESVSSS
0901: PMRLSNPEKR ISVSKKKEES YDANVFAAGS LKKFSDGEGE DDGGSDRSQS QMKDKHGSHE SSVLDIWDNK GSLKAKERAD PSLDANFENG GHKTLPRKLD
1001: HILGEGKQSS DHHRRSNDSL AKKSGKGSSS RSKEKSQSIR SDSRDGPRHI EKKIYDGSPD SRADMIVRPN IPKPHDSERI PERSNIADLA SPSRPPSRGV
1101: QGDSSMLSVR KKVDKCSTSA GNNNIQADDV TKATAQIRRK SEPSPSPLRK EITSAQAAHN TLKEAKDLKH TADRLKNSVS NLEHIELYFQ ACLKFLHGAF
1201: LLEMSSNESA RQGETMVQSM KIYSSTANLC GFCAHEYEKS KDMGAAALAY KCMEVAYMRV VNSSYTSANR YRNELQTSLQ MVPPGESPSS SASDVDNVNH
1301: PAAVDRVGTS RGISSPLVAG NHVISAQNRS NLLRLLQFAQ DVNLSMDASR KSRVALTACI ENSGEAQQQG EGIISIKSAL DYNFQDMEGL LRLVKLAMKA
1401: NNR
Arabidopsis Description
CW-type Zinc Finger [Source:UniProtKB/TrEMBL;Acc:F4IZK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.