Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32489 | Canola | nucleus | 87.17 | 84.09 |
| Bra032575.1-P | Field mustard | nucleus | 46.67 | 69.04 |
| CDY18138 | Canola | nucleus | 48.12 | 52.42 |
| CDX89924 | Canola | nucleus | 47.06 | 50.94 |
| VIT_14s0128g00910.t01 | Wine grape | cytosol | 3.95 | 43.62 |
| Os05t0371100-00 | Rice | cytosol | 4.73 | 33.56 |
| CDY11456 | Canola | nucleus | 28.45 | 22.74 |
| CDX67908 | Canola | nucleus | 28.25 | 22.38 |
| CDX76670 | Canola | nucleus | 27.39 | 22.1 |
| CDY25123 | Canola | nucleus | 27.97 | 21.95 |
| CDY54298 | Canola | nucleus | 17.74 | 19.57 |
| CDY66331 | Canola | nucleus | 17.26 | 19.12 |
| KXG39393 | Sorghum | mitochondrion | 23.92 | 18.52 |
| OQU90452 | Sorghum | nucleus | 27.68 | 17.96 |
| Zm00001d029134_P004 | Maize | mitochondrion | 23.34 | 17.73 |
| TraesCS2A01G116600.1 | Wheat | nucleus | 26.9 | 17.65 |
| Zm00001d022481_P019 | Maize | nucleus | 27.1 | 17.64 |
| TraesCS2D01G118500.1 | Wheat | nucleus | 26.71 | 17.53 |
| TraesCS2B01G135800.1 | Wheat | nucleus | 26.52 | 17.39 |
| GSMUA_Achr5P08000_001 | Banana | nucleus | 23.72 | 17.39 |
| Os03t0347300-01 | Rice | cytosol, nucleus | 15.24 | 17.04 |
| Zm00001d007121_P024 | Maize | nucleus | 25.84 | 16.83 |
| GSMUA_Achr8P21920_001 | Banana | nucleus | 24.78 | 16.21 |
| GSMUA_Achr3P08980_001 | Banana | nucleus | 25.36 | 16.0 |
| Os07t0669800-01 | Rice | nucleus | 15.33 | 15.17 |
| TraesCS1B01G246700.4 | Wheat | nucleus | 20.83 | 14.79 |
| TraesCS1D01G235200.1 | Wheat | nucleus | 20.83 | 14.69 |
| OQU77880 | Sorghum | nucleus | 19.86 | 14.46 |
| HORVU1Hr1G058250.1 | Barley | nucleus | 20.44 | 14.43 |
| TraesCS1A01G237200.3 | Wheat | nucleus | 20.44 | 14.37 |
| Zm00001d010490_P005 | Maize | nucleus | 19.48 | 14.21 |
Protein Annotations
| EnsemblPlants:CDY37451 | EnsemblPlantsGene:GSBRNA2T00064031001 | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF14 | ProteinID:CDY37451 | ProteinID:CDY37451.1 |
| SEG:seg | UniParc:UPI0004EE52AD | UniProt:A0A078HI80 | MapMan:35.2 | : | : |
Description
BnaC08g45890DBnaC08g45890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HI80]
Coordinates
chrLK032400:+:174918..179786
Molecular Weight (calculated)
113632.0 Da
IEP (calculated)
7.330
GRAVY (calculated)
-0.832
Length
1037 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVKDLFLIVP FHMISVSSSD ARNEIGLGFG GGIEEEEDME MDEDEEEEST HSYVSCVDPD VALSYIDEKL ENVLGHFQKD FEGGVSAENL GAKYGGYGSF
0101: LSMYQRSPAC KSPPQVVGQP KCSPSPSKAG STSKAPPPAS SDVLAKMKNL VKSSNDIKQK PLTKTSPSPS SSSAPSNHKT LKLRIKVGSK SDLSLKNVST
0201: YDGKQGLNMM PPSEVEEGLL IGTHDSPTKI LMAMVSFPFH KDQLLSPLSD DLIQLGKKGH IMKDALRCVK KEKLKYMPPP SNRLDGSHIV SDTDREVDKE
0301: SSCEELVSKT MKLPLLSCLS PSSIHRAKEI DKVSDSYVEG ALRRMSNTDL DAALMGGSKP ELEDDVVAFP DQSVEGTESV NTRKDMEEGE HVDPVVKVSK
0401: SEEQSLKSKL PKAQKSRKSS SRNGLRGKDA AVNVINTSLP DKLQEDIGDS GEAKEQEQSS LVPKSKKENL SEESAVKESF NSVRNDEEAW KCEPDSKHPI
0501: KSSDLNKDLH NTKESVRSEV KNKHSVVGGM EPERELSGTC KKPKTGKSRF SALDQPGSNK TIKDIGKPSP HEDRKRKQKE NKESGDCIRD AAVMEPSGEK
0601: VRKQKRLKGS SYDGKELPES CDRDRVVTQE NGRDSASHQP LVHEAKGSLV DSLAPSALDP PELKSERISD RDKHHDTDSS AGDTRKRCRD GEGYITMDKP
0701: GTTRKAAESL RDNKEGYCTE SEPQQEKAKE SRNKKRPARK VSIESNKEDS SREHQDPINK LDNTNSTDQT KVTRHDDHVG SSPLKKEITS QAASNSIKEA
0801: TDLKHIADRL KNAGNNHESI GFYFQAALKF LHGASLLESS GTENATHKSI VTSKHIYGST AKLCKFCAHE YEKDKDMGAA ALAYKCMEVA YLRITYSSHG
0901: NINRYKSELE ASLQVIPSGE SPSFASDGEN PNKTLVAEKV ALSTPVRSSP KVTGNHVLSS GNHSSLSQLL TFSQNVSLAM DASRKAQTAF AVAKGKSSDT
1001: RYSSNGITSI KRAIDFSFQD MEKLVHAVRL AMESINR
0101: LSMYQRSPAC KSPPQVVGQP KCSPSPSKAG STSKAPPPAS SDVLAKMKNL VKSSNDIKQK PLTKTSPSPS SSSAPSNHKT LKLRIKVGSK SDLSLKNVST
0201: YDGKQGLNMM PPSEVEEGLL IGTHDSPTKI LMAMVSFPFH KDQLLSPLSD DLIQLGKKGH IMKDALRCVK KEKLKYMPPP SNRLDGSHIV SDTDREVDKE
0301: SSCEELVSKT MKLPLLSCLS PSSIHRAKEI DKVSDSYVEG ALRRMSNTDL DAALMGGSKP ELEDDVVAFP DQSVEGTESV NTRKDMEEGE HVDPVVKVSK
0401: SEEQSLKSKL PKAQKSRKSS SRNGLRGKDA AVNVINTSLP DKLQEDIGDS GEAKEQEQSS LVPKSKKENL SEESAVKESF NSVRNDEEAW KCEPDSKHPI
0501: KSSDLNKDLH NTKESVRSEV KNKHSVVGGM EPERELSGTC KKPKTGKSRF SALDQPGSNK TIKDIGKPSP HEDRKRKQKE NKESGDCIRD AAVMEPSGEK
0601: VRKQKRLKGS SYDGKELPES CDRDRVVTQE NGRDSASHQP LVHEAKGSLV DSLAPSALDP PELKSERISD RDKHHDTDSS AGDTRKRCRD GEGYITMDKP
0701: GTTRKAAESL RDNKEGYCTE SEPQQEKAKE SRNKKRPARK VSIESNKEDS SREHQDPINK LDNTNSTDQT KVTRHDDHVG SSPLKKEITS QAASNSIKEA
0801: TDLKHIADRL KNAGNNHESI GFYFQAALKF LHGASLLESS GTENATHKSI VTSKHIYGST AKLCKFCAHE YEKDKDMGAA ALAYKCMEVA YLRITYSSHG
0901: NINRYKSELE ASLQVIPSGE SPSFASDGEN PNKTLVAEKV ALSTPVRSSP KVTGNHVLSS GNHSSLSQLL TFSQNVSLAM DASRKAQTAF AVAKGKSSDT
1001: RYSSNGITSI KRAIDFSFQD MEKLVHAVRL AMESINR
0001: MILVSSSDAR SELGLGFGGL GEEIMQDCDF EEESTHSYVS CVDPDVALSY IDEKLENVLG HFQKDFEGGV SAENLGAKFG GYGSFLSMYQ RSPVCSRPKT
0101: SPEVQQNQLG GRSNCSASSL VPQLSISGSA SKPPASDVLV KLNKFVKSSH IGTPDSKHMS DAKTSSSAPS NHKTLRFRIK VGSSDLSSLK NVSTFTKEGL
0201: NMLPSASRVN CLSEVEQDLL NGICDSPTKI LMAMVSFPLH KDQLLSPLSD DLIQLGSKEK ILKDAGYGST NKTDAKSTPD GLVVSDSQKR AGKFPIGKKE
0301: KLRDRVKYRP PSNKLDRNHT VSNTEKEADK ESCEELVSKT MKLPLLSCLS PSYIHPAKEI DNVSDSNVES ILRGTNKDAA LMGSKPELED NVVAFSDRSV
0401: KETESINVRK DVYLIKGEPL NSLESNPKRE KAPSIEHVDY SSVVKGTQSE TRNEEQILKS KLPKVQRSQK GSSSIVTMNS QRGKDAAVNI IKKNVPDKLQ
0501: EDIEESEHMC KGFFGDSKES KEEKQISPVL KAEKEKLSEE NALGESFNSV KNDEEACDHL NLVCEPDLKH LIKPSDLNED RHTTKQSVRR EVKNKHSLEG
0601: GMENMGMESE RELSGVSKKP KTGKSRFSAV DQPGSNKSNQ ILEVLDTNKT MITQALAENV KDFAKASSHG ERDDRKRKLK ENEESGDCMR LREAAVMESS
0701: GENVRKRKRL KGSSCDEKEL PFSSESCDKE RSVSQENGRD SASHLPSTLS SPSLCKDLGS EIIKNNVRES KGSLVESVAP LALRVLDSGE LKSGRISERD
0801: EYHDTDYNAG ETLKRCRDGE AYSTIDRPGT TKKAAEDSKD RERAYGEDCS IENLKPKKSG RYPGENCIEG DSKQKSREEE SSAPSKDNNW GLVNNVQDLG
0901: TAVKVKTKES RSKKRPARKV SMECNKEDSR EYQDPNTKLD RSGSHFSSRQ KPDTANTSRG KSNPLEVTTE QLKNKSASPA QVEVLGHDTE ISNTKKQRLR
1001: NDNHSVTHDE GSRNQKQNGS RHKDHVGLSP FKKESTSQTA SNSIKEATDL KHMADRLKNA VSNHESTGVY FQAALKFLHG ASLLESSGTT IARSKDIYGS
1101: TAKLCEFCAH EYEKNKDMGA AALAYKCMEV AYLRITYTSH GNIRRCRYEL QAALQVIPSG ESPSFASDGE NSNHTLTAEK FALSNTVRSS PSVTGNHVIS
1201: SGNNSSLSQL LAFSKNVNYA MEASRKAQIA LAAAKGKSFE TRYSSNGITC IKRALDFNFQ DMEKLLHVVR LAMESINR
0101: SPEVQQNQLG GRSNCSASSL VPQLSISGSA SKPPASDVLV KLNKFVKSSH IGTPDSKHMS DAKTSSSAPS NHKTLRFRIK VGSSDLSSLK NVSTFTKEGL
0201: NMLPSASRVN CLSEVEQDLL NGICDSPTKI LMAMVSFPLH KDQLLSPLSD DLIQLGSKEK ILKDAGYGST NKTDAKSTPD GLVVSDSQKR AGKFPIGKKE
0301: KLRDRVKYRP PSNKLDRNHT VSNTEKEADK ESCEELVSKT MKLPLLSCLS PSYIHPAKEI DNVSDSNVES ILRGTNKDAA LMGSKPELED NVVAFSDRSV
0401: KETESINVRK DVYLIKGEPL NSLESNPKRE KAPSIEHVDY SSVVKGTQSE TRNEEQILKS KLPKVQRSQK GSSSIVTMNS QRGKDAAVNI IKKNVPDKLQ
0501: EDIEESEHMC KGFFGDSKES KEEKQISPVL KAEKEKLSEE NALGESFNSV KNDEEACDHL NLVCEPDLKH LIKPSDLNED RHTTKQSVRR EVKNKHSLEG
0601: GMENMGMESE RELSGVSKKP KTGKSRFSAV DQPGSNKSNQ ILEVLDTNKT MITQALAENV KDFAKASSHG ERDDRKRKLK ENEESGDCMR LREAAVMESS
0701: GENVRKRKRL KGSSCDEKEL PFSSESCDKE RSVSQENGRD SASHLPSTLS SPSLCKDLGS EIIKNNVRES KGSLVESVAP LALRVLDSGE LKSGRISERD
0801: EYHDTDYNAG ETLKRCRDGE AYSTIDRPGT TKKAAEDSKD RERAYGEDCS IENLKPKKSG RYPGENCIEG DSKQKSREEE SSAPSKDNNW GLVNNVQDLG
0901: TAVKVKTKES RSKKRPARKV SMECNKEDSR EYQDPNTKLD RSGSHFSSRQ KPDTANTSRG KSNPLEVTTE QLKNKSASPA QVEVLGHDTE ISNTKKQRLR
1001: NDNHSVTHDE GSRNQKQNGS RHKDHVGLSP FKKESTSQTA SNSIKEATDL KHMADRLKNA VSNHESTGVY FQAALKFLHG ASLLESSGTT IARSKDIYGS
1101: TAKLCEFCAH EYEKNKDMGA AALAYKCMEV AYLRITYTSH GNIRRCRYEL QAALQVIPSG ESPSFASDGE NSNHTLTAEK FALSNTVRSS PSVTGNHVIS
1201: SGNNSSLSQL LAFSKNVNYA MEASRKAQIA LAAAKGKSFE TRYSSNGITC IKRALDFNFQ DMEKLLHVVR LAMESINR
Arabidopsis Description
BEST Arabidopsis thaliana protein match is: CW-type Zinc Finger (TAIR:AT3G62900.1); Has 5847 Blast hits to 4410 proteins in 438 species: Archae - 17; Bacteria - 452; Metazoa - 2463; Fungi - 354; Plants - 306; Viruses - 11; Other Eukaryotes - 2244 (s /.../ NCBI BLink). [Source:TAIR;Acc:AT1G02990]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.