Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT4G04950.1 | EES03940 | AT5G09830.1 | 21798944 |
AT4G04950.1 | EER93093 | AT5G13280.1 | 21798944 |
AT4G04950.1 | KXG34945 | AT5G13280.1 | 21798944 |
AT4G04950.1 | OQU88150 | AT5G13280.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d006437_P001 | Maize | cytosol | 59.72 | 95.21 |
Zm00001d013927_P001 | Maize | extracellular | 95.19 | 95.19 |
Zm00001d032546_P001 | Maize | extracellular | 93.59 | 93.59 |
Os10t0500700-01 | Rice | cytosol | 86.77 | 88.19 |
TraesCS1D01G166900.1 | Wheat | cytosol | 83.17 | 84.87 |
TraesCS1A01G168900.1 | Wheat | cytosol | 82.97 | 84.66 |
TraesCS1B01G188000.1 | Wheat | cytosol | 82.16 | 83.84 |
Zm00001d016478_P001 | Maize | cytosol | 50.9 | 82.47 |
GSMUA_Achr8P11270_001 | Banana | cytosol | 64.13 | 72.89 |
GSMUA_Achr2P10580_001 | Banana | cytosol | 69.74 | 72.2 |
CDY16635 | Canola | cytosol | 43.69 | 71.01 |
Bra029532.1-P | Field mustard | cytosol | 46.89 | 69.03 |
CDY67888 | Canola | cytosol | 48.5 | 68.75 |
Zm00001d011577_P001 | Maize | cytosol | 66.53 | 67.89 |
Bra000810.1-P | Field mustard | cytosol | 64.53 | 67.65 |
CDX90882 | Canola | cytosol | 64.53 | 67.51 |
AT4G04950.1 | Thale cress | cytosol | 65.73 | 67.21 |
VIT_10s0597g00030.t01 | Wine grape | cytosol | 65.53 | 66.46 |
KRH20463 | Soybean | nucleus | 65.13 | 66.33 |
Solyc02g078360.2.1 | Tomato | cytosol | 38.28 | 64.53 |
CDY21322 | Canola | cytosol | 64.53 | 63.39 |
Zm00001d006222_P001 | Maize | cytosol | 62.32 | 62.32 |
AT4G32580.1 | Thale cress | cytosol | 18.64 | 58.12 |
EER93091 | Sorghum | plastid | 12.02 | 34.88 |
EES16486 | Sorghum | cytosol | 10.02 | 34.01 |
KXG31737 | Sorghum | mitochondrion | 12.02 | 32.43 |
EES12336 | Sorghum | mitochondrion | 11.82 | 31.05 |
EES09081 | Sorghum | plastid | 14.03 | 24.39 |
Protein Annotations
Gene3D:3.40.30.10 | MapMan:35.1 | UniProt:A0A1B6QJZ2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
GO:GO:0005623 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 |
GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:GRX_PICOT-like |
InterPro:Glutaredoxin | InterPro:IPR002109 | InterPro:IPR013766 | ProteinID:KXG38233.1 | EnsemblPlants:KXG38234 | ProteinID:KXG38234 |
ProteinID:KXG38234.1 | InterPro:Monothiol_GRX-rel | PFAM:PF00085 | PFAM:PF00462 | PFscan:PS51352 | PFscan:PS51354 |
EnsemblPlantsGene:SORBI_3001G203900 | SUPFAM:SSF52833 | TIGRFAMs:TIGR00365 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI0002207042 |
SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:18589164..18594526
Molecular Weight (calculated)
54002.4 Da
IEP (calculated)
5.044
GRAVY (calculated)
-0.223
Length
499 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGGAVREV RSPAELEAAV AGVRAAAVHF WASWCEASKQ MDEVFAHLAV DFPHAAFLRV EAEEQPEISE AHGVSAVPYV VFYKEGKIVD TLEGANPASL
101: ANKVAKVAGP ASVAESAVPA SLGVAAGPAV LENIQKMAQQ NGSSAAESTN SGSKEDALNK RLEQLVNSHP VFLFMKGTPE QPRCGFSRKV VDILKQEGVK
201: FGSFDILTDN DVREGMKKFS NWPTFPQLYC KGELLGGCDI VIAMHDSGEL KDVFEEHNIP LKPQGSKNEE AGEPGSATDK GGAVAEPIRL TDAQKARLES
301: LINSSPVMVF IKGTPEEPKC GFSGKLLHIL KQENIPFSSF DILSDDEVRQ GLKVFSNWPS YPQLYIKGEL VGGSDIVMEM HKSGELKKVL SEKGVIPKES
401: LEDRLKSLIS SAPVMLFMKG TPDAPRCGFS SKVVNALKKE GVSFGSFDIL SDEEVRQGLK TYSNWPTFPQ LYYKSELIGG CDIILEMEKS GELKSTLSE
101: ANKVAKVAGP ASVAESAVPA SLGVAAGPAV LENIQKMAQQ NGSSAAESTN SGSKEDALNK RLEQLVNSHP VFLFMKGTPE QPRCGFSRKV VDILKQEGVK
201: FGSFDILTDN DVREGMKKFS NWPTFPQLYC KGELLGGCDI VIAMHDSGEL KDVFEEHNIP LKPQGSKNEE AGEPGSATDK GGAVAEPIRL TDAQKARLES
301: LINSSPVMVF IKGTPEEPKC GFSGKLLHIL KQENIPFSSF DILSDDEVRQ GLKVFSNWPS YPQLYIKGEL VGGSDIVMEM HKSGELKKVL SEKGVIPKES
401: LEDRLKSLIS SAPVMLFMKG TPDAPRCGFS SKVVNALKKE GVSFGSFDIL SDEEVRQGLK TYSNWPTFPQ LYYKSELIGG CDIILEMEKS GELKSTLSE
001: MSGTVKDIVS KAELDNLRQS GAPVVLHFWA SWCDASKQMD QVFSHLATDF PRAHFFRVEA EEHPEISEAY SVAAVPYFVF FKDGKTVDTL EGADPSSLAN
101: KVGKVAGSST SAEPAAPASL GLAAGPTILE TVKENAKASL QDRAQPVSTA DALKSRLEKL TNSHPVMLFM KGIPEEPRCG FSRKVVDILK EVNVDFGSFD
201: ILSDNEVREG LKKFSNWPTF PQLYCNGELL GGADIAIAMH ESGELKDAFK DLGITTVGSK ESQDEAGKGG GVSSGNTGLS ETLRARLEGL VNSKPVMLFM
301: KGRPEEPKCG FSGKVVEILN QEKIEFGSFD ILLDDEVRQG LKVYSNWSSY PQLYVKGELM GGSDIVLEMQ KSGELKKVLT EKGITGEQSL EDRLKALINS
401: SEVMLFMKGS PDEPKCGFSS KVVKALRGEN VSFGSFDILT DEEVRQGIKN FSNWPTFPQL YYKGELIGGC DIIMELSESG DLKATLSE
101: KVGKVAGSST SAEPAAPASL GLAAGPTILE TVKENAKASL QDRAQPVSTA DALKSRLEKL TNSHPVMLFM KGIPEEPRCG FSRKVVDILK EVNVDFGSFD
201: ILSDNEVREG LKKFSNWPTF PQLYCNGELL GGADIAIAMH ESGELKDAFK DLGITTVGSK ESQDEAGKGG GVSSGNTGLS ETLRARLEGL VNSKPVMLFM
301: KGRPEEPKCG FSGKVVEILN QEKIEFGSFD ILLDDEVRQG LKVYSNWSSY PQLYVKGELM GGSDIVLEMQ KSGELKKVLT EKGITGEQSL EDRLKALINS
401: SEVMLFMKGS PDEPKCGFSS KVVKALRGEN VSFGSFDILT DEEVRQGIKN FSNWPTFPQL YYKGELIGGC DIIMELSESG DLKATLSE
Arabidopsis Description
GRXS17Monothiol glutaredoxin-S17 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPH2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.