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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plastid 2
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d006437_P001 Maize cytosol 59.72 95.21
Zm00001d013927_P001 Maize extracellular 95.19 95.19
Zm00001d032546_P001 Maize extracellular 93.59 93.59
Os10t0500700-01 Rice cytosol 86.77 88.19
TraesCS1D01G166900.1 Wheat cytosol 83.17 84.87
TraesCS1A01G168900.1 Wheat cytosol 82.97 84.66
TraesCS1B01G188000.1 Wheat cytosol 82.16 83.84
Zm00001d016478_P001 Maize cytosol 50.9 82.47
GSMUA_Achr8P11270_001 Banana cytosol 64.13 72.89
GSMUA_Achr2P10580_001 Banana cytosol 69.74 72.2
CDY16635 Canola cytosol 43.69 71.01
Bra029532.1-P Field mustard cytosol 46.89 69.03
CDY67888 Canola cytosol 48.5 68.75
Zm00001d011577_P001 Maize cytosol 66.53 67.89
Bra000810.1-P Field mustard cytosol 64.53 67.65
CDX90882 Canola cytosol 64.53 67.51
AT4G04950.1 Thale cress cytosol 65.73 67.21
VIT_10s0597g00030.t01 Wine grape cytosol 65.53 66.46
KRH20463 Soybean nucleus 65.13 66.33
Solyc02g078360.2.1 Tomato cytosol 38.28 64.53
CDY21322 Canola cytosol 64.53 63.39
Zm00001d006222_P001 Maize cytosol 62.32 62.32
AT4G32580.1 Thale cress cytosol 18.64 58.12
EER93091 Sorghum plastid 12.02 34.88
EES16486 Sorghum cytosol 10.02 34.01
KXG31737 Sorghum mitochondrion 12.02 32.43
EES12336 Sorghum mitochondrion 11.82 31.05
EES09081 Sorghum plastid 14.03 24.39
Protein Annotations
Gene3D:3.40.30.10MapMan:35.1UniProt:A0A1B6QJZ2GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005623GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009987
GO:GO:0015035GO:GO:0019725GO:GO:0022900GO:GO:0045454GO:GO:0055114InterPro:GRX_PICOT-like
InterPro:GlutaredoxinInterPro:IPR002109InterPro:IPR013766ProteinID:KXG38233.1EnsemblPlants:KXG38234ProteinID:KXG38234
ProteinID:KXG38234.1InterPro:Monothiol_GRX-relPFAM:PF00085PFAM:PF00462PFscan:PS51352PFscan:PS51354
EnsemblPlantsGene:SORBI_3001G203900SUPFAM:SSF52833TIGRFAMs:TIGR00365InterPro:Thioredoxin-like_sfInterPro:Thioredoxin_domainUniParc:UPI0002207042
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr1:-:18589164..18594526
Molecular Weight (calculated)
54002.4 Da
IEP (calculated)
5.044
GRAVY (calculated)
-0.223
Length
499 amino acids
Sequence
(BLAST)
001: MASGGAVREV RSPAELEAAV AGVRAAAVHF WASWCEASKQ MDEVFAHLAV DFPHAAFLRV EAEEQPEISE AHGVSAVPYV VFYKEGKIVD TLEGANPASL
101: ANKVAKVAGP ASVAESAVPA SLGVAAGPAV LENIQKMAQQ NGSSAAESTN SGSKEDALNK RLEQLVNSHP VFLFMKGTPE QPRCGFSRKV VDILKQEGVK
201: FGSFDILTDN DVREGMKKFS NWPTFPQLYC KGELLGGCDI VIAMHDSGEL KDVFEEHNIP LKPQGSKNEE AGEPGSATDK GGAVAEPIRL TDAQKARLES
301: LINSSPVMVF IKGTPEEPKC GFSGKLLHIL KQENIPFSSF DILSDDEVRQ GLKVFSNWPS YPQLYIKGEL VGGSDIVMEM HKSGELKKVL SEKGVIPKES
401: LEDRLKSLIS SAPVMLFMKG TPDAPRCGFS SKVVNALKKE GVSFGSFDIL SDEEVRQGLK TYSNWPTFPQ LYYKSELIGG CDIILEMEKS GELKSTLSE
Best Arabidopsis Sequence Match ( AT4G04950.1 )
(BLAST)
001: MSGTVKDIVS KAELDNLRQS GAPVVLHFWA SWCDASKQMD QVFSHLATDF PRAHFFRVEA EEHPEISEAY SVAAVPYFVF FKDGKTVDTL EGADPSSLAN
101: KVGKVAGSST SAEPAAPASL GLAAGPTILE TVKENAKASL QDRAQPVSTA DALKSRLEKL TNSHPVMLFM KGIPEEPRCG FSRKVVDILK EVNVDFGSFD
201: ILSDNEVREG LKKFSNWPTF PQLYCNGELL GGADIAIAMH ESGELKDAFK DLGITTVGSK ESQDEAGKGG GVSSGNTGLS ETLRARLEGL VNSKPVMLFM
301: KGRPEEPKCG FSGKVVEILN QEKIEFGSFD ILLDDEVRQG LKVYSNWSSY PQLYVKGELM GGSDIVLEMQ KSGELKKVLT EKGITGEQSL EDRLKALINS
401: SEVMLFMKGS PDEPKCGFSS KVVKALRGEN VSFGSFDILT DEEVRQGIKN FSNWPTFPQL YYKGELIGGC DIIMELSESG DLKATLSE
Arabidopsis Description
GRXS17Monothiol glutaredoxin-S17 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPH2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.