Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000810.1-P | Field mustard | cytosol | 90.55 | 96.64 |
| CDX90882 | Canola | cytosol | 89.37 | 95.18 |
| CDY67888 | Canola | cytosol | 62.01 | 89.49 |
| CDY16635 | Canola | cytosol | 53.54 | 88.6 |
| AT4G32580.1 | Thale cress | cytosol | 27.17 | 86.25 |
| AT4G04950.1 | Thale cress | cytosol | 81.89 | 85.25 |
| VIT_10s0597g00030.t01 | Wine grape | cytosol | 69.49 | 71.75 |
| KRH20463 | Soybean | nucleus | 65.55 | 67.96 |
| GSMUA_Achr2P10580_001 | Banana | cytosol | 64.17 | 67.63 |
| TraesCS1D01G166900.1 | Wheat | cytosol | 64.37 | 66.87 |
| TraesCS1B01G188000.1 | Wheat | cytosol | 64.37 | 66.87 |
| TraesCS1A01G168900.1 | Wheat | cytosol | 63.78 | 66.26 |
| Zm00001d006437_P001 | Maize | cytosol | 40.75 | 66.13 |
| Zm00001d013927_P001 | Maize | extracellular | 64.17 | 65.33 |
| Os10t0500700-01 | Rice | cytosol | 62.8 | 64.97 |
| GSMUA_Achr8P11270_001 | Banana | cytosol | 55.91 | 64.69 |
| KXG38234 | Sorghum | cytosol | 63.39 | 64.53 |
| Zm00001d032546_P001 | Maize | extracellular | 63.19 | 64.33 |
| Solyc02g078360.2.1 | Tomato | cytosol | 37.2 | 63.85 |
| Zm00001d016478_P001 | Maize | cytosol | 34.84 | 57.47 |
| CDX73434 | Canola | cytosol | 7.48 | 48.72 |
| Zm00001d011577_P001 | Maize | cytosol | 45.87 | 47.65 |
| Zm00001d006222_P001 | Maize | cytosol | 42.32 | 43.09 |
| CDX67614 | Canola | plastid | 12.6 | 35.36 |
| CDY07516 | Canola | plastid | 12.4 | 34.81 |
| CDX78278 | Canola | plastid | 11.81 | 34.68 |
| CDY21857 | Canola | mitochondrion | 10.83 | 32.93 |
| CDY20141 | Canola | mitochondrion | 10.63 | 32.34 |
| CDX97692 | Canola | mitochondrion | 10.63 | 31.58 |
| CDY30094 | Canola | mitochondrion | 9.65 | 29.7 |
| CDY07744 | Canola | plastid | 13.19 | 22.95 |
| CDY14473 | Canola | plastid | 12.99 | 22.92 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | GO:A0A078G8H6 | UniProt:A0A078G8H6 | EnsemblPlants:CDY21322 | ProteinID:CDY21322 |
| ProteinID:CDY21322.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 |
| GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:GRX_PICOT-like | EnsemblPlantsGene:GSBRNA2T00015664001 | InterPro:Glutaredoxin |
| InterPro:IPR002109 | InterPro:IPR013766 | InterPro:Monothiol_GRX-rel | PFAM:PF00085 | PFAM:PF00462 | PFscan:PS51352 |
| PFscan:PS51354 | SUPFAM:SSF52833 | TIGRFAMs:TIGR00365 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI0004EEE1A4 |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g30060DBnaC03g30060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8H6]
Coordinates
chrLK032119:-:578287..580413
Molecular Weight (calculated)
55345.8 Da
IEP (calculated)
4.833
GRAVY (calculated)
-0.265
Length
508 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGAVKDIAS KSELDNLRQS GAPVVLHFWA SWCDASKQMD QVFSHLATDF PRAHFFRVEA EEHPEISEAY SVSAVPYFVF FKLVSLLDWE KNQMKSSLLI
101: LACALSGCNF SVDCDGKAVD TLEGADPSSL ANKVSKVAGS STSAEPAAPA SLGLAAGPTI LETVKENAKA NSKDRSQPVS TSTTKEALNT RLEKLTKSNP
201: VMLFMKGTPE EPRCGFSKNV VNILKEEKVE FGSFDILSDN EVREGLKKFS NWPTYPQLYS NGELLGGADI VIAMHESGEL KEALTDEAGK GGGGISSGST
301: GGLSETLRAR LEGLVNSRPV MLFMKGKPEE PKCGFSGKVV EILKQEKIEF ASFDILLDDE VRQGLKVYSN WSSYPQLYVK GELLGGSDIV LEMQKSGELK
401: QVFSEKGKSL EERLKSLINS EKVMLFMKGS PDEPKCGFSS KVVKALRDED VSFGSFDILS DEEVRQGIKS FSNWPTFPQL YYKGELVGGC DIIMELSSSG
501: DLKATLSE
101: LACALSGCNF SVDCDGKAVD TLEGADPSSL ANKVSKVAGS STSAEPAAPA SLGLAAGPTI LETVKENAKA NSKDRSQPVS TSTTKEALNT RLEKLTKSNP
201: VMLFMKGTPE EPRCGFSKNV VNILKEEKVE FGSFDILSDN EVREGLKKFS NWPTYPQLYS NGELLGGADI VIAMHESGEL KEALTDEAGK GGGGISSGST
301: GGLSETLRAR LEGLVNSRPV MLFMKGKPEE PKCGFSGKVV EILKQEKIEF ASFDILLDDE VRQGLKVYSN WSSYPQLYVK GELLGGSDIV LEMQKSGELK
401: QVFSEKGKSL EERLKSLINS EKVMLFMKGS PDEPKCGFSS KVVKALRDED VSFGSFDILS DEEVRQGIKS FSNWPTFPQL YYKGELVGGC DIIMELSSSG
501: DLKATLSE
001: MSGTVKDIVS KAELDNLRQS GAPVVLHFWA SWCDASKQMD QVFSHLATDF PRAHFFRVEA EEHPEISEAY SVAAVPYFVF FKDGKTVDTL EGADPSSLAN
101: KVGKVAGSST SAEPAAPASL GLAAGPTILE TVKENAKASL QDRAQPVSTA DALKSRLEKL TNSHPVMLFM KGIPEEPRCG FSRKVVDILK EVNVDFGSFD
201: ILSDNEVREG LKKFSNWPTF PQLYCNGELL GGADIAIAMH ESGELKDAFK DLGITTVGSK ESQDEAGKGG GVSSGNTGLS ETLRARLEGL VNSKPVMLFM
301: KGRPEEPKCG FSGKVVEILN QEKIEFGSFD ILLDDEVRQG LKVYSNWSSY PQLYVKGELM GGSDIVLEMQ KSGELKKVLT EKGITGEQSL EDRLKALINS
401: SEVMLFMKGS PDEPKCGFSS KVVKALRGEN VSFGSFDILT DEEVRQGIKN FSNWPTFPQL YYKGELIGGC DIIMELSESG DLKATLSE
101: KVGKVAGSST SAEPAAPASL GLAAGPTILE TVKENAKASL QDRAQPVSTA DALKSRLEKL TNSHPVMLFM KGIPEEPRCG FSRKVVDILK EVNVDFGSFD
201: ILSDNEVREG LKKFSNWPTF PQLYCNGELL GGADIAIAMH ESGELKDAFK DLGITTVGSK ESQDEAGKGG GVSSGNTGLS ETLRARLEGL VNSKPVMLFM
301: KGRPEEPKCG FSGKVVEILN QEKIEFGSFD ILLDDEVRQG LKVYSNWSSY PQLYVKGELM GGSDIVLEMQ KSGELKKVLT EKGITGEQSL EDRLKALINS
401: SEVMLFMKGS PDEPKCGFSS KVVKALRGEN VSFGSFDILT DEEVRQGIKN FSNWPTFPQL YYKGELIGGC DIIMELSESG DLKATLSE
Arabidopsis Description
GRXS17Monothiol glutaredoxin-S17 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPH2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.