Factsheet for Zm00001d006437_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005151_P004
Zm00001d018301_P001
Zm00001d029179_P001
Zm00001d034851_P001
Zm00001d035282_P001
Zm00001d037282_P001
Zm00001d042264_P006
Zm00001d042726_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G04950.1	Zm00001d042726_P001	AT5G09830.1	21798944
AT4G04950.1	Zm00001d005151_P004	AT5G13280.1	21798944
AT4G04950.1	Zm00001d018301_P001	AT5G13280.1	21798944
AT4G04950.1	Zm00001d029179_P001	AT5G13280.1	21798944
AT4G04950.1	Zm00001d034851_P001	AT5G13280.1	21798944
AT4G04950.1	Zm00001d035282_P001	AT5G13280.1	21798944
AT4G04950.1	Zm00001d037282_P001	AT5G13280.1	21798944
AT4G04950.1	Zm00001d042264_P006	AT5G13280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016478_P001	Maize	cytosol	77.64	78.9
Zm00001d011577_P001	Maize	cytosol	97.44	62.37
Zm00001d013927_P001	Maize	extracellular	96.49	60.52
KXG38234	Sorghum	cytosol	95.21	59.72
Zm00001d032546_P001	Maize	extracellular	92.33	57.92
Zm00001d006222_P001	Maize	cytosol	90.42	56.71
Os10t0500700-01	Rice	cytosol	87.22	55.6
TraesCS1A01G168900.1	Wheat	cytosol	84.03	53.78
TraesCS1D01G166900.1	Wheat	cytosol	83.71	53.58
TraesCS1B01G188000.1	Wheat	cytosol	82.11	52.56
GSMUA_Achr8P11270_001	Banana	cytosol	68.37	48.75
GSMUA_Achr2P10580_001	Banana	cytosol	70.29	45.64
Bra000810.1-P	Field mustard	cytosol	66.13	43.49
VIT_10s0597g00030.t01	Wine grape	cytosol	68.05	43.29
AT4G04950.1	Thale cress	cytosol	67.41	43.24
CDX90882	Canola	cytosol	65.81	43.19
KRH20463	Soybean	nucleus	66.45	42.45
CDY16635	Canola	cytosol	41.21	42.02
CDY21322	Canola	cytosol	66.13	40.75
Bra029532.1-P	Field mustard	cytosol	41.21	38.05
CDY67888	Canola	cytosol	41.53	36.93
Zm00001d012845_P001	Maize	plastid	17.89	32.56
Zm00001d034857_P001	Maize	plastid	17.89	32.56
Zm00001d008736_P001	Maize	mitochondrion	15.34	28.74
Zm00001d025657_P001	Maize	mitochondrion	14.38	23.32
Solyc02g078360.2.1	Tomato	cytosol	21.09	22.3
Zm00001d005094_P001	Maize	plastid	17.57	18.9
Zm00001d044606_P001	Maize	plastid	16.29	17.47
AT4G32580.1	Thale cress	cytosol	1.6	3.12

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	UniProt:A0A1D6EW99	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GRX_PICOT-like
InterPro:Glutaredoxin	InterPro:IPR002109	InterPro:Monothiol_GRX-rel	ProteinID:ONM23821.1	PFAM:PF00462	PFscan:PS51354
SUPFAM:SSF52833	TIGRFAMs:TIGR00365	InterPro:Thioredoxin-like_sf	UniParc:UPI0002219BAE	EnsemblPlantsGene:Zm00001d006437	EnsemblPlants:Zm00001d006437_P001
EnsemblPlants:Zm00001d006437_T001	:	:	:	:	:

Description

Monothiol glutaredoxin-S17

Coordinates

chr2:+:208168131..208169072

Molecular Weight (calculated)

34356.4 Da

IEP (calculated)

5.313

GRAVY (calculated)

-0.318

Length

313 amino acids

Sequence
(BLAST)

001: MAKRGHILKQ EGVKFGSFDI LTDNDVREGM KKFSNWPTVP QLYCKGELLG GCGIVIAMHD SGELKDVFEE HNIPLKPQGS KNEEAGQPES ATEKGGAVVE
101: PIGLTDAQKA RLESLINSSP VMVFIKGTPE EPRCGFSGKL VHILKQENIP VSSFDILSDD EVRQGLKVLS NWPSYPQLYI KGELVGGSDI VMEMHKSGEL
201: KKVLSEKGVI PKESLEDRLK SLVSSAPVML FMKGTPDAPR CGFSSKVVNA LKKEGVSFGS FDILSDEEVR QGLKTYSNWP TFPQLYYKSE LIGGCDIVLE
301: MEKSGELKST LSE

Best Arabidopsis Sequence Match ( AT4G04950.1 )
(BLAST)

001: MSGTVKDIVS KAELDNLRQS GAPVVLHFWA SWCDASKQMD QVFSHLATDF PRAHFFRVEA EEHPEISEAY SVAAVPYFVF FKDGKTVDTL EGADPSSLAN
101: KVGKVAGSST SAEPAAPASL GLAAGPTILE TVKENAKASL QDRAQPVSTA DALKSRLEKL TNSHPVMLFM KGIPEEPRCG FSRKVVDILK EVNVDFGSFD
201: ILSDNEVREG LKKFSNWPTF PQLYCNGELL GGADIAIAMH ESGELKDAFK DLGITTVGSK ESQDEAGKGG GVSSGNTGLS ETLRARLEGL VNSKPVMLFM
301: KGRPEEPKCG FSGKVVEILN QEKIEFGSFD ILLDDEVRQG LKVYSNWSSY PQLYVKGELM GGSDIVLEMQ KSGELKKVLT EKGITGEQSL EDRLKALINS
401: SEVMLFMKGS PDEPKCGFSS KVVKALRGEN VSFGSFDILT DEEVRQGIKN FSNWPTFPQL YYKGELIGGC DIIMELSESG DLKATLSE

Arabidopsis Description

GRXS17Monothiol glutaredoxin-S17 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.