Factsheet for GSMUA_Achr8P11270_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 1
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr6P19570_001
GSMUA_Achr8P09140_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G04950.1	GSMUA_Achr6P19570_001	AT5G09830.1	21798944
AT4G04950.1	GSMUA_Achr8P09140_001	AT5G13280.1	21798944
AT4G04950.1	GSMUA_AchrUn_...	AT5G13280.1	21798944
AT4G04950.1	GSMUA_AchrUn_...	AT5G13280.1	21798944
AT4G04950.1	GSMUA_AchrUn_...	AT5G13280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P10580_001	Banana	cytosol	77.45	70.54
Zm00001d006437_P001	Maize	cytosol	48.75	68.37
CDY16635	Canola	cytosol	45.33	64.82
Zm00001d032546_P001	Maize	extracellular	73.58	64.73
VIT_10s0597g00030.t01	Wine grape	cytosol	72.44	64.63
Zm00001d013927_P001	Maize	extracellular	73.35	64.53
KXG38234	Sorghum	cytosol	72.89	64.13
KRH20463	Soybean	nucleus	70.61	63.27
TraesCS1D01G166900.1	Wheat	cytosol	70.39	63.19
Os10t0500700-01	Rice	cytosol	70.61	63.14
TraesCS1A01G168900.1	Wheat	cytosol	69.7	62.58
TraesCS1B01G188000.1	Wheat	cytosol	69.25	62.17
AT4G04950.1	Thale cress	cytosol	67.2	60.45
CDX90882	Canola	cytosol	64.69	59.54
Bra000810.1-P	Field mustard	cytosol	64.46	59.45
CDY67888	Canola	cytosol	47.61	59.38
Bra029532.1-P	Field mustard	cytosol	45.79	59.29
CDY21322	Canola	cytosol	64.69	55.91
Zm00001d016478_P001	Maize	cytosol	39.18	55.84
Solyc02g078360.2.1	Tomato	cytosol	34.85	51.69
Zm00001d011577_P001	Maize	cytosol	53.99	48.47
AT4G32580.1	Thale cress	cytosol	17.54	48.12
Zm00001d006222_P001	Maize	cytosol	48.97	43.09
GSMUA_Achr6P15060_001	Banana	plastid	11.39	28.74
GSMUA_Achr10P...	Banana	mitochondrion	10.71	24.48
GSMUA_Achr5P14210_001	Banana	plastid	16.17	21.85
GSMUA_Achr7P08380_001	Banana	plastid	12.07	19.49

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GRX_PICOT-like	EnsemblPlantsGene:GSMUA_Achr8G11270_001
EnsemblPlants:GSMUA_Achr8P11270_001	EnsemblPlants:GSMUA_Achr8T11270_001	InterPro:Glutaredoxin	InterPro:IPR002109	InterPro:IPR013766	UniProt:M0TPI0
InterPro:Monothiol_GRX-rel	PFAM:PF00085	PFAM:PF00462	PFscan:PS51354	SUPFAM:SSF52833	TIGRFAMs:TIGR00365
InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0002964F43	:	:	:

Description

Monothiol glutaredoxin-S11 [Source:GMGC_GENE;Acc:GSMUA_Achr8G11270_001]

Coordinates

chr8:+:8152449..8156241

Molecular Weight (calculated)

48380.7 Da

IEP (calculated)

4.594

GRAVY (calculated)

-0.202

Length

439 amino acids

Sequence
(BLAST)

001: MDQVFAHLAA DFPHALFFRV EAEEQPEISE AYAVSAVPYF VFCKDGRTID TLEGADPSSL ANKVAKVVSD SFAGSASPAT SLEMADAPTE TIKKLPEENG
101: SSHNESPSSD LSDALRMRLQ QLVNSHPVFL FMKGNPEQPK CGFSRTVVNI LKDEGVEFGS FNILMDDEVR EGMKKFSNWP TFPQLFCKGE LVGGCDIAVA
201: MHETGELKDL FREHGVPVIS KETEVVDSTK NAALSSRLHV LINSSPVMVF MKGKPDEPKC GFSRKVIEIL QQEKLAFDSF DILSDDEVRQ GLKIFSNFPS
301: YPQLYIGGEL IGGSDIVLEM HKSGELKMTL AEKGIISEVT LEDRLKNLIT SSPVMLFIKG TPDAPRCGFS SKVVDALKKE GIDFGSFDIL SNEEVRQGLK
401: TYSNWPTYPQ LYYKGELIGG CDILLELQNS GELKSTLSE

Best Arabidopsis Sequence Match ( AT4G04950.1 )
(BLAST)

001: MSGTVKDIVS KAELDNLRQS GAPVVLHFWA SWCDASKQMD QVFSHLATDF PRAHFFRVEA EEHPEISEAY SVAAVPYFVF FKDGKTVDTL EGADPSSLAN
101: KVGKVAGSST SAEPAAPASL GLAAGPTILE TVKENAKASL QDRAQPVSTA DALKSRLEKL TNSHPVMLFM KGIPEEPRCG FSRKVVDILK EVNVDFGSFD
201: ILSDNEVREG LKKFSNWPTF PQLYCNGELL GGADIAIAMH ESGELKDAFK DLGITTVGSK ESQDEAGKGG GVSSGNTGLS ETLRARLEGL VNSKPVMLFM
301: KGRPEEPKCG FSGKVVEILN QEKIEFGSFD ILLDDEVRQG LKVYSNWSSY PQLYVKGELM GGSDIVLEMQ KSGELKKVLT EKGITGEQSL EDRLKALINS
401: SEVMLFMKGS PDEPKCGFSS KVVKALRGEN VSFGSFDILT DEEVRQGIKN FSNWPTFPQL YYKGELIGGC DIIMELSESG DLKATLSE

Arabidopsis Description

GRXS17Monothiol glutaredoxin-S17 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.