Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000810.1-P | Field mustard | cytosol | 97.69 | 97.9 |
| CDY67888 | Canola | cytosol | 66.88 | 90.62 |
| CDY16635 | Canola | cytosol | 57.86 | 89.9 |
| CDY21322 | Canola | cytosol | 95.18 | 89.37 |
| AT4G32580.1 | Thale cress | cytosol | 28.72 | 85.62 |
| AT4G04950.1 | Thale cress | cytosol | 87.0 | 85.04 |
| VIT_10s0597g00030.t01 | Wine grape | cytosol | 73.17 | 70.94 |
| GSMUA_Achr2P10580_001 | Banana | cytosol | 68.13 | 67.43 |
| KRH20463 | Soybean | nucleus | 68.97 | 67.14 |
| TraesCS1D01G166900.1 | Wheat | cytosol | 68.34 | 66.67 |
| TraesCS1B01G188000.1 | Wheat | cytosol | 68.13 | 66.46 |
| TraesCS1A01G168900.1 | Wheat | cytosol | 67.71 | 66.05 |
| Zm00001d006437_P001 | Maize | cytosol | 43.19 | 65.81 |
| Zm00001d013927_P001 | Maize | extracellular | 68.34 | 65.33 |
| GSMUA_Achr8P11270_001 | Banana | cytosol | 59.54 | 64.69 |
| KXG38234 | Sorghum | cytosol | 67.51 | 64.53 |
| Os10t0500700-01 | Rice | cytosol | 66.25 | 64.36 |
| Zm00001d032546_P001 | Maize | extracellular | 66.88 | 63.93 |
| Solyc02g078360.2.1 | Tomato | cytosol | 38.57 | 62.16 |
| Zm00001d016478_P001 | Maize | cytosol | 36.9 | 57.14 |
| CDX73434 | Canola | cytosol | 7.97 | 48.72 |
| Zm00001d011577_P001 | Maize | cytosol | 49.06 | 47.85 |
| Zm00001d006222_P001 | Maize | cytosol | 45.28 | 43.29 |
| CDX67614 | Canola | plastid | 13.63 | 35.91 |
| CDY07516 | Canola | plastid | 13.42 | 35.36 |
| CDX78278 | Canola | plastid | 12.79 | 35.26 |
| CDY21857 | Canola | mitochondrion | 11.74 | 33.53 |
| CDY20141 | Canola | mitochondrion | 11.53 | 32.93 |
| CDX97692 | Canola | mitochondrion | 11.53 | 32.16 |
| CDY30094 | Canola | mitochondrion | 10.48 | 30.3 |
| CDY07744 | Canola | plastid | 13.63 | 22.26 |
| CDY14473 | Canola | plastid | 13.42 | 22.22 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | GO:A0A078DPI7 | EnsemblPlants:CDX90882 | ProteinID:CDX90882 | ProteinID:CDX90882.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009055 |
| GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | InterPro:GRX_PICOT-like | EnsemblPlantsGene:GSBRNA2T00151605001 |
| InterPro:Glutaredoxin | InterPro:IPR002109 | InterPro:IPR013766 | InterPro:Monothiol_GRX-rel | PFAM:PF00085 | PFAM:PF00462 |
| PFscan:PS51352 | PFscan:PS51354 | SUPFAM:SSF52833 | TIGRFAMs:TIGR00365 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain |
| UniParc:UPI0004EF08FC | SEG:seg | : | : | : | : |
Description
BnaA03g25620D
Coordinates
chrLK031864:-:1078585..1080789
Molecular Weight (calculated)
51925.5 Da
IEP (calculated)
4.803
GRAVY (calculated)
-0.313
Length
477 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGAVKDIAS KSELDNIRQS GAPVVLHFWA SWCDASKQMD QVFSHLATDF PRAHFFRVEA EEHPEISEAY SVSAVPYFVF FKDGKAVDTL EGADPSSLAN
101: KVGRVAGSST SAEPAAPASL GLAAGPTILE TVKENAKATS KDRAQPLSTT TTTTEALNTR LEKLTNSHPV MLFMKGTPEE PRCGFSKNVV NILKEEEVEF
201: RSFDILSDNE VREGLKKFSN WPTYPQLYSN GELLGGADIV IAMHESGELK EALTDEAGKG GGGITSGNAG GLSESLRARL EGLVNSSPVM LFMKGKPQEP
301: KCGFSGKVVE ILNQEKIKFG SFDILLDDEV RQGLKVYSNW SSYPQLYVKG ELLGGSDIVL EMQKSGELKQ VFSEKGKSLE DRLKSLINSE KVMLFMKGSP
401: DEPKCGFSSK VVKALRDEDV SFGSFDILSD EEVRQGIKSF SNWPTFPQLY YKGELVGGCD IIMELSSSGD LKATLSE
101: KVGRVAGSST SAEPAAPASL GLAAGPTILE TVKENAKATS KDRAQPLSTT TTTTEALNTR LEKLTNSHPV MLFMKGTPEE PRCGFSKNVV NILKEEEVEF
201: RSFDILSDNE VREGLKKFSN WPTYPQLYSN GELLGGADIV IAMHESGELK EALTDEAGKG GGGITSGNAG GLSESLRARL EGLVNSSPVM LFMKGKPQEP
301: KCGFSGKVVE ILNQEKIKFG SFDILLDDEV RQGLKVYSNW SSYPQLYVKG ELLGGSDIVL EMQKSGELKQ VFSEKGKSLE DRLKSLINSE KVMLFMKGSP
401: DEPKCGFSSK VVKALRDEDV SFGSFDILSD EEVRQGIKSF SNWPTFPQLY YKGELVGGCD IIMELSSSGD LKATLSE
001: MSGTVKDIVS KAELDNLRQS GAPVVLHFWA SWCDASKQMD QVFSHLATDF PRAHFFRVEA EEHPEISEAY SVAAVPYFVF FKDGKTVDTL EGADPSSLAN
101: KVGKVAGSST SAEPAAPASL GLAAGPTILE TVKENAKASL QDRAQPVSTA DALKSRLEKL TNSHPVMLFM KGIPEEPRCG FSRKVVDILK EVNVDFGSFD
201: ILSDNEVREG LKKFSNWPTF PQLYCNGELL GGADIAIAMH ESGELKDAFK DLGITTVGSK ESQDEAGKGG GVSSGNTGLS ETLRARLEGL VNSKPVMLFM
301: KGRPEEPKCG FSGKVVEILN QEKIEFGSFD ILLDDEVRQG LKVYSNWSSY PQLYVKGELM GGSDIVLEMQ KSGELKKVLT EKGITGEQSL EDRLKALINS
401: SEVMLFMKGS PDEPKCGFSS KVVKALRGEN VSFGSFDILT DEEVRQGIKN FSNWPTFPQL YYKGELIGGC DIIMELSESG DLKATLSE
101: KVGKVAGSST SAEPAAPASL GLAAGPTILE TVKENAKASL QDRAQPVSTA DALKSRLEKL TNSHPVMLFM KGIPEEPRCG FSRKVVDILK EVNVDFGSFD
201: ILSDNEVREG LKKFSNWPTF PQLYCNGELL GGADIAIAMH ESGELKDAFK DLGITTVGSK ESQDEAGKGG GVSSGNTGLS ETLRARLEGL VNSKPVMLFM
301: KGRPEEPKCG FSGKVVEILN QEKIEFGSFD ILLDDEVRQG LKVYSNWSSY PQLYVKGELM GGSDIVLEMQ KSGELKKVLT EKGITGEQSL EDRLKALINS
401: SEVMLFMKGS PDEPKCGFSS KVVKALRGEN VSFGSFDILT DEEVRQGIKN FSNWPTFPQL YYKGELIGGC DIIMELSESG DLKATLSE
Arabidopsis Description
GRXS17Monothiol glutaredoxin-S17 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPH2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.