Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009080.1-P | Field mustard | nucleus | 98.91 | 98.91 |
| CDX69884 | Canola | cytosol, nucleus, plastid | 97.83 | 97.83 |
| AT5G09830.1 | Thale cress | cytosol | 94.57 | 93.55 |
| CDY18699 | Canola | cytosol | 82.61 | 77.55 |
| CDX81243 | Canola | cytosol | 81.52 | 76.53 |
| KRH59529 | Soybean | cytosol | 76.09 | 75.27 |
| KRH43388 | Soybean | cytosol, nucleus, plastid | 73.91 | 73.12 |
| VIT_04s0044g00520.t01 | Wine grape | nucleus | 69.57 | 68.82 |
| Solyc11g005360.1.1 | Tomato | cytosol | 67.39 | 67.39 |
| GSMUA_Achr6P19570_001 | Banana | cytosol | 64.13 | 66.29 |
| Os01t0866600-01 | Rice | cytosol, extracellular | 51.09 | 64.38 |
| EES03940 | Sorghum | cytosol | 63.04 | 62.37 |
| Zm00001d042726_P001 | Maize | cytosol | 63.04 | 61.05 |
| TraesCS3D01G371400.1 | Wheat | cytosol | 59.78 | 59.14 |
| TraesCS3B01G410900.1 | Wheat | cytosol | 59.78 | 56.7 |
| HORVU7Hr1G085970.1 | Barley | cytosol | 43.48 | 54.79 |
| HORVU4Hr1G032970.1 | Barley | cytosol | 56.52 | 54.74 |
| TraesCS3A01G378100.1 | Wheat | cytosol | 57.61 | 54.64 |
| HORVU0Hr1G019400.1 | Barley | cytosol | 54.35 | 52.63 |
| HORVU3Hr1G083310.1 | Barley | cytosol | 60.87 | 40.29 |
| TraesCS3A01G378200.1 | Wheat | cytosol | 4.35 | 4.08 |
| TraesCS3D01G371500.1 | Wheat | cytosol | 4.35 | 4.08 |
Protein Annotations
| EnsemblPlants:CDY21608 | EnsemblPlantsGene:GSBRNA2T00016078001 | Gene3D:3.30.300.90 | InterPro:BolA | InterPro:BolA-like_sf | ncoils:Coil |
| PANTHER:PTHR12735 | PANTHER:PTHR12735:SF39 | PFAM:PF01722 | PIRSF:PIRSF003113 | ProteinID:CDY21608 | ProteinID:CDY21608.1 |
| SEG:seg | SUPFAM:SSF82657 | UniParc:UPI0004EC0D7A | UniProt:A0A078GA84 | MapMan:7.11.1.2.6 | : |
Description
BnaC09g46840DBnaC09g46840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GA84]
Coordinates
chrLK032122:-:478821..480014
Molecular Weight (calculated)
10264.2 Da
IEP (calculated)
5.660
GRAVY (calculated)
-0.623
Length
92 amino acids
Sequence
(BLAST)
(BLAST)
1: MVTKEQVEAS LTSKLKPIHL EVNDISGGCG SSFEVEVVSE QFEGKRLLER HRMVNAALEE EMKEIHALSI KKAQTPQQWK PSQDSATQAK DA
1: MVTKEQVEAS LTSKLKPIHL EVIDISGGCG SSFEVEVVSE QFEGKRLLER HRMVNAALEE EMKEIHALSI KKAQTPQQWK PPSQDSATLT KDA
Arabidopsis Description
BOLA2Protein BOLA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIC3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.