Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G032970.1 | Barley | cytosol | 61.15 | 89.47 |
| TraesCS3D01G371400.1 | Wheat | cytosol | 58.99 | 88.17 |
| HORVU0Hr1G019400.1 | Barley | cytosol | 58.99 | 86.32 |
| Os01t0866600-01 | Rice | cytosol, extracellular | 45.32 | 86.3 |
| TraesCS3B01G410900.1 | Wheat | cytosol | 59.71 | 85.57 |
| EES03940 | Sorghum | cytosol | 56.12 | 83.87 |
| TraesCS3A01G378100.1 | Wheat | cytosol | 58.27 | 83.51 |
| HORVU7Hr1G085970.1 | Barley | cytosol | 43.17 | 82.19 |
| Zm00001d042726_P001 | Maize | cytosol | 54.68 | 80.0 |
| GSMUA_Achr6P19570_001 | Banana | cytosol | 41.01 | 64.04 |
| CDY21608 | Canola | cytosol | 40.29 | 60.87 |
| Bra009080.1-P | Field mustard | nucleus | 40.29 | 60.87 |
| VIT_04s0044g00520.t01 | Wine grape | nucleus | 40.29 | 60.22 |
| CDX69884 | Canola | cytosol, nucleus, plastid | 39.57 | 59.78 |
| KRH43388 | Soybean | cytosol, nucleus, plastid | 39.57 | 59.14 |
| KRH59529 | Soybean | cytosol | 39.57 | 59.14 |
| AT5G09830.1 | Thale cress | cytosol | 39.57 | 59.14 |
| CDY18699 | Canola | cytosol | 41.01 | 58.16 |
| Bra037789.1-P | Field mustard | cytosol | 41.01 | 58.16 |
| Solyc11g005360.1.1 | Tomato | cytosol | 37.41 | 56.52 |
| CDX81243 | Canola | cytosol | 39.57 | 56.12 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G083310.1 | EnsemblPlantsGene:HORVU3Hr1G083310 | Gene3D:3.10.20.90 | InterPro:BolA | InterPro:BolA-like_sf | PANTHER:PTHR12735 |
| PANTHER:PTHR12735:SF39 | PFAM:PF01722 | PIRSF:PIRSF003113 | SEG:seg | SUPFAM:SSF82657 | UniParc:UPI000B481FD0 |
| UniProt:A0A287LZS7 | MapMan:7.11.1.2.6 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:602776782..602777889
Molecular Weight (calculated)
14913.9 Da
IEP (calculated)
10.398
GRAVY (calculated)
-0.357
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: HSIRSILRGK WDKLIGGRHS QVESLLLRRP GTDRETKRRG RQSSAAMGVT KEDVEAAVAA ALSPTHLVVT DTSGGCGASY EIEVVSGKFE GKRLLERHRM
101: VNTALAPLMA EIHAVSIKAL TPEQAQPQPS PPAVTADKA
101: VNTALAPLMA EIHAVSIKAL TPEQAQPQPS PPAVTADKA
1: MVTKEQVEAS LTSKLKPIHL EVIDISGGCG SSFEVEVVSE QFEGKRLLER HRMVNAALEE EMKEIHALSI KKAQTPQQWK PPSQDSATLT KDA
Arabidopsis Description
BOLA2Protein BOLA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIC3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.