Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_07s0005g04860.t01 | |
| VIT_08s0105g00490.t01 | |
| VIT_09s0002g06040.t01 | |
| VIT_10s0597g00030.t01 | cytosol, nucleus |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43388 | Soybean | cytosol, nucleus, plastid | 82.8 | 82.8 |
| KRH59529 | Soybean | cytosol | 81.72 | 81.72 |
| Solyc11g005360.1.1 | Tomato | cytosol | 74.19 | 75.0 |
| Bra037789.1-P | Field mustard | cytosol | 75.27 | 71.43 |
| CDY18699 | Canola | cytosol | 74.19 | 70.41 |
| GSMUA_Achr6P19570_001 | Banana | cytosol | 66.67 | 69.66 |
| CDY21608 | Canola | cytosol | 68.82 | 69.57 |
| CDX81243 | Canola | cytosol | 73.12 | 69.39 |
| AT5G09830.1 | Thale cress | cytosol | 68.82 | 68.82 |
| Bra009080.1-P | Field mustard | nucleus | 67.74 | 68.48 |
| CDX69884 | Canola | cytosol, nucleus, plastid | 67.74 | 68.48 |
| EES03940 | Sorghum | cytosol | 65.59 | 65.59 |
| Os01t0866600-01 | Rice | cytosol, extracellular | 50.54 | 64.38 |
| Zm00001d042726_P001 | Maize | cytosol | 64.52 | 63.16 |
| TraesCS3D01G371400.1 | Wheat | cytosol | 59.14 | 59.14 |
| TraesCS3B01G410900.1 | Wheat | cytosol | 59.14 | 56.7 |
| HORVU4Hr1G032970.1 | Barley | cytosol | 56.99 | 55.79 |
| HORVU0Hr1G019400.1 | Barley | cytosol | 54.84 | 53.68 |
| TraesCS3A01G378100.1 | Wheat | cytosol | 55.91 | 53.61 |
| HORVU7Hr1G085970.1 | Barley | cytosol | 41.94 | 53.42 |
| HORVU3Hr1G083310.1 | Barley | cytosol | 60.22 | 40.29 |
| TraesCS3A01G378200.1 | Wheat | cytosol | 3.23 | 3.06 |
| TraesCS3D01G371500.1 | Wheat | cytosol | 3.23 | 3.06 |
Protein Annotations
| EntrezGene:100245396 | wikigene:100245396 | Gene3D:3.30.300.90 | MapMan:7.11.1.2.6 | InterPro:BolA | InterPro:BolA-like_sf |
| ProteinID:CBI37605 | ProteinID:CBI37605.3 | UniProt:D7U429 | EMBL:FN596506 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006950 | GO:GO:0006979 |
| GO:GO:0008150 | GO:GO:0010039 | EntrezGene:LOC100245396 | wikigene:LOC100245396 | PFAM:PF01722 | PIRSF:PIRSF003113 |
| PANTHER:PTHR12735 | PANTHER:PTHR12735:SF39 | SUPFAM:SSF82657 | TIGR:TC60595 | UniParc:UPI00015CC119 | ArrayExpress:VIT_04s0044g00520 |
| EnsemblPlantsGene:VIT_04s0044g00520 | EnsemblPlants:VIT_04s0044g00520.t01 | unigene:Vvi.7791 | RefSeq:XP_002282721 | RefSeq:XP_002282721.1 | : |
Description
No Description!
Coordinates
chr4:+:21358624..21362722
Molecular Weight (calculated)
10262.1 Da
IEP (calculated)
4.850
GRAVY (calculated)
-0.469
Length
93 amino acids
Sequence
(BLAST)
(BLAST)
1: MGVTKEDVES SLTSVMNPSH LEVIDTSGGC GASFAIEIVS EQFEGKRLLE RHRMVNAALQ EELKQIHALS IKKALTPEQW KQQQEAENSQ PAA
1: MVTKEQVEAS LTSKLKPIHL EVIDISGGCG SSFEVEVVSE QFEGKRLLER HRMVNAALEE EMKEIHALSI KKAQTPQQWK PPSQDSATLT KDA
Arabidopsis Description
BOLA2Protein BOLA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIC3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.