Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- nucleus 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43388 | Soybean | cytosol, nucleus, plastid | 95.7 | 95.7 |
| VIT_04s0044g00520.t01 | Wine grape | nucleus | 81.72 | 81.72 |
| Solyc11g005360.1.1 | Tomato | cytosol | 76.34 | 77.17 |
| CDY21608 | Canola | cytosol | 75.27 | 76.09 |
| Bra009080.1-P | Field mustard | nucleus | 74.19 | 75.0 |
| CDX69884 | Canola | cytosol, nucleus, plastid | 74.19 | 75.0 |
| AT5G09830.1 | Thale cress | cytosol | 74.19 | 74.19 |
| Bra037789.1-P | Field mustard | cytosol | 77.42 | 73.47 |
| GSMUA_Achr6P19570_001 | Banana | cytosol | 69.89 | 73.03 |
| CDY18699 | Canola | cytosol | 76.34 | 72.45 |
| CDX81243 | Canola | cytosol | 74.19 | 70.41 |
| Os01t0866600-01 | Rice | cytosol, extracellular | 47.31 | 60.27 |
| EES03940 | Sorghum | cytosol | 60.22 | 60.22 |
| Zm00001d042726_P001 | Maize | cytosol | 60.22 | 58.95 |
| TraesCS3D01G371400.1 | Wheat | cytosol | 56.99 | 56.99 |
| TraesCS3B01G410900.1 | Wheat | cytosol | 58.06 | 55.67 |
| HORVU4Hr1G032970.1 | Barley | cytosol | 54.84 | 53.68 |
| HORVU0Hr1G019400.1 | Barley | cytosol | 54.84 | 53.68 |
| TraesCS3A01G378100.1 | Wheat | cytosol | 54.84 | 52.58 |
| HORVU7Hr1G085970.1 | Barley | cytosol | 40.86 | 52.05 |
| HORVU3Hr1G083310.1 | Barley | cytosol | 59.14 | 39.57 |
| TraesCS3A01G378200.1 | Wheat | cytosol | 4.3 | 4.08 |
| TraesCS3D01G371500.1 | Wheat | cytosol | 4.3 | 4.08 |
Protein Annotations
| EMBL:ACUP02003328 | EMBL:BT096371 | EnsemblPlants:KRH59529 | EnsemblPlantsGene:GLYMA_05G188300 | EntrezGene:100778528 | Gene3D:3.30.300.90 |
| InterPro:BolA | InterPro:BolA-like_sf | ncoils:Coil | PANTHER:PTHR12735 | PANTHER:PTHR12735:SF39 | PFAM:PF01722 |
| PIRSF:PIRSF003113 | ProteinID:KRH59529 | ProteinID:KRH59529.1 | SUPFAM:SSF82657 | UniParc:UPI0001B166B8 | UniProt:C6TFI3 |
| MapMan:7.11.1.2.6 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:37440094..37442762
Molecular Weight (calculated)
10341.4 Da
IEP (calculated)
6.251
GRAVY (calculated)
-0.461
Length
93 amino acids
Sequence
(BLAST)
(BLAST)
1: MGVTKEQVEL SLKAKLNPSH LEVVDISGGC GASFVVEIVS EQFEGKRLLE RHRMVNAALE EEMKQIHALS IKKAVTPEQW KQQQESNQSN PAA
1: MVTKEQVEAS LTSKLKPIHL EVIDISGGCG SSFEVEVVSE QFEGKRLLER HRMVNAALEE EMKEIHALSI KKAQTPQQWK PPSQDSATLT KDA
Arabidopsis Description
BOLA2Protein BOLA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIC3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.