Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- nucleus 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_01s0244g00140.t01 | |
| VIT_04s0044g00520.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G04950.1 | VIT_04s0044g00520.t01 | AT5G09830.1 | 21798944 |
| AT4G04950.1 | VIT_01s0244g00140.t01 | AT5G13280.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH20463 | Soybean | nucleus | 79.47 | 79.8 |
| CDY16635 | Canola | cytosol | 46.75 | 74.92 |
| CDY67888 | Canola | cytosol | 53.46 | 74.72 |
| Bra029532.1-P | Field mustard | cytosol | 51.42 | 74.63 |
| AT4G04950.1 | Thale cress | cytosol | 73.98 | 74.59 |
| Bra000810.1-P | Field mustard | cytosol | 71.14 | 73.53 |
| CDX90882 | Canola | cytosol | 70.94 | 73.17 |
| Solyc02g078360.2.1 | Tomato | cytosol | 43.9 | 72.97 |
| GSMUA_Achr8P11270_001 | Banana | cytosol | 64.63 | 72.44 |
| GSMUA_Achr2P10580_001 | Banana | cytosol | 70.73 | 72.2 |
| AT4G32580.1 | Thale cress | cytosol | 23.17 | 71.25 |
| CDY21322 | Canola | cytosol | 71.75 | 69.49 |
| Zm00001d006437_P001 | Maize | cytosol | 43.29 | 68.05 |
| TraesCS1D01G166900.1 | Wheat | cytosol | 66.87 | 67.28 |
| TraesCS1B01G188000.1 | Wheat | cytosol | 66.67 | 67.08 |
| TraesCS1A01G168900.1 | Wheat | cytosol | 66.46 | 66.87 |
| Zm00001d032546_P001 | Maize | extracellular | 67.07 | 66.13 |
| Os10t0500700-01 | Rice | cytosol | 65.85 | 65.99 |
| Zm00001d013927_P001 | Maize | extracellular | 66.87 | 65.93 |
| KXG38234 | Sorghum | cytosol | 66.46 | 65.53 |
| Zm00001d016478_P001 | Maize | cytosol | 36.99 | 59.09 |
| Zm00001d011577_P001 | Maize | cytosol | 47.97 | 48.26 |
| Zm00001d006222_P001 | Maize | cytosol | 44.51 | 43.89 |
| VIT_09s0002g06040.t01 | Wine grape | mitochondrion | 11.59 | 33.53 |
| VIT_08s0105g00490.t01 | Wine grape | plastid | 14.02 | 23.23 |
Protein Annotations
| EntrezGene:100257317 | wikigene:100257317 | Gene3D:3.40.30.10 | MapMan:35.1 | ProteinID:CCB57425 | ProteinID:CCB57425.1 |
| UniProt:F6HRW7 | EMBL:FN596054 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:GRX_PICOT-like | InterPro:Glutaredoxin |
| InterPro:IPR002109 | InterPro:IPR013766 | EntrezGene:LOC100257317 | wikigene:LOC100257317 | InterPro:Monothiol_GRX-rel | PFAM:PF00085 |
| PFAM:PF00462 | PFscan:PS51352 | PFscan:PS51354 | SUPFAM:SSF52833 | TIGRFAMs:TIGR00365 | InterPro:Thioredoxin-like_sf |
| InterPro:Thioredoxin_domain | UniParc:UPI00021085A5 | ArrayExpress:VIT_10s0597g00030 | EnsemblPlantsGene:VIT_10s0597g00030 | EnsemblPlants:VIT_10s0597g00030.t01 | unigene:Vvi.6485 |
| RefSeq:XP_002270415 | RefSeq:XP_002270415.2 | RefSeq:XP_010655426.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr10:+:1288705..1294634
Molecular Weight (calculated)
54015.4 Da
IEP (calculated)
4.785
GRAVY (calculated)
-0.251
Length
492 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGSVKDVES KEELDNVVRQ GAPVILHFWA SWCEASKHMD QVFSHLSTDF PHAVFFRVEA EEQPVISEAY SVSAVPYFVF FKDGKTVDTM EGADPSSLAN
101: KVAKVAGSIN PGEAAAPASL GMAAGPTVLE TVKEFAKENG ASQVESQLPS GLSDTLKIHL QKVIETQPVM LFMKGSPEEP KCGFSRKVVE ILREEKVKFG
201: SFDILLDTEV REGLKKFSNW PTFPQLYCKG ELLGGCDIAI AMHESGELKE VFRDHGIETS DLNEAKETKP GSGKGGISES TGLSVTLTSR LESLINSSPV
301: ILFMKGKPDE PRCGFSRKVV EILQQEKVDF GSFDILSDDE VRQGLKVHSN WSSYPQLYIK GELIGGSDIV LEMQKSGELA RVLAEKGITQ KETLEDRVRN
401: LINSSPTMLF MKGTPDAPKC GFSSKVVDAL RAENVSFGSF DILTDEEVRQ GLKVFSNWPT FPQLYYKGEL IGGCDIIMEL RNNGELKSTL SE
101: KVAKVAGSIN PGEAAAPASL GMAAGPTVLE TVKEFAKENG ASQVESQLPS GLSDTLKIHL QKVIETQPVM LFMKGSPEEP KCGFSRKVVE ILREEKVKFG
201: SFDILLDTEV REGLKKFSNW PTFPQLYCKG ELLGGCDIAI AMHESGELKE VFRDHGIETS DLNEAKETKP GSGKGGISES TGLSVTLTSR LESLINSSPV
301: ILFMKGKPDE PRCGFSRKVV EILQQEKVDF GSFDILSDDE VRQGLKVHSN WSSYPQLYIK GELIGGSDIV LEMQKSGELA RVLAEKGITQ KETLEDRVRN
401: LINSSPTMLF MKGTPDAPKC GFSSKVVDAL RAENVSFGSF DILTDEEVRQ GLKVFSNWPT FPQLYYKGEL IGGCDIIMEL RNNGELKSTL SE
001: MSGTVKDIVS KAELDNLRQS GAPVVLHFWA SWCDASKQMD QVFSHLATDF PRAHFFRVEA EEHPEISEAY SVAAVPYFVF FKDGKTVDTL EGADPSSLAN
101: KVGKVAGSST SAEPAAPASL GLAAGPTILE TVKENAKASL QDRAQPVSTA DALKSRLEKL TNSHPVMLFM KGIPEEPRCG FSRKVVDILK EVNVDFGSFD
201: ILSDNEVREG LKKFSNWPTF PQLYCNGELL GGADIAIAMH ESGELKDAFK DLGITTVGSK ESQDEAGKGG GVSSGNTGLS ETLRARLEGL VNSKPVMLFM
301: KGRPEEPKCG FSGKVVEILN QEKIEFGSFD ILLDDEVRQG LKVYSNWSSY PQLYVKGELM GGSDIVLEMQ KSGELKKVLT EKGITGEQSL EDRLKALINS
401: SEVMLFMKGS PDEPKCGFSS KVVKALRGEN VSFGSFDILT DEEVRQGIKN FSNWPTFPQL YYKGELIGGC DIIMELSESG DLKATLSE
101: KVGKVAGSST SAEPAAPASL GLAAGPTILE TVKENAKASL QDRAQPVSTA DALKSRLEKL TNSHPVMLFM KGIPEEPRCG FSRKVVDILK EVNVDFGSFD
201: ILSDNEVREG LKKFSNWPTF PQLYCNGELL GGADIAIAMH ESGELKDAFK DLGITTVGSK ESQDEAGKGG GVSSGNTGLS ETLRARLEGL VNSKPVMLFM
301: KGRPEEPKCG FSGKVVEILN QEKIEFGSFD ILLDDEVRQG LKVYSNWSSY PQLYVKGELM GGSDIVLEMQ KSGELKKVLT EKGITGEQSL EDRLKALINS
401: SEVMLFMKGS PDEPKCGFSS KVVKALRGEN VSFGSFDILT DEEVRQGIKN FSNWPTFPQL YYKGELIGGC DIIMELSESG DLKATLSE
Arabidopsis Description
GRXS17Monothiol glutaredoxin-S17 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPH2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.