Factsheet for VIT_01s0244g00140.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_06s0004g03280.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13280.1	VIT_06s0004g03280.t01	AT5G60340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029179_P001	Maize	extracellular	9.08	82.54
GSMUA_Achr8P09140_001	Banana	cytosol	69.11	81.31
Zm00001d018301_P001	Maize	extracellular, plasma membrane	32.98	77.14
VIT_03s0097g00340.t01	Wine grape	extracellular	14.49	76.85
Os03t0850400-01	Rice	cytosol, mitochondrion, plastid	69.81	74.49
Zm00001d034851_P001	Maize	plastid	55.32	74.41
Solyc01g005240.2.1	Tomato	plastid	73.3	74.34
TraesCS4A01G337800.1	Wheat	plastid	72.08	74.15
TraesCS5B01G547400.1	Wheat	plastid	72.25	74.06
HORVU5Hr1G121250.1	Barley	plastid	72.43	73.97
EER93093	Sorghum	plastid	72.95	73.85
TraesCS5D01G487000.2	Wheat	plastid	72.08	73.49
AT5G13280.1	Thale cress	plastid	72.95	73.46
GSMUA_AchrUn_...	Banana	plastid	54.45	72.56
TraesCS5D01G534600.1	Wheat	plastid	71.38	72.26
Bra008840.1-P	Field mustard	plastid	69.46	72.23
CDX69652	Canola	plastid	69.46	72.23
Zm00001d037282_P001	Maize	plastid	20.42	72.22
CDY09781	Canola	plastid	68.94	71.82
Bra023401.1-P	Field mustard	plastid	69.28	71.66
CDX85659	Canola	plastid	69.28	71.66
CDX91135	Canola	plastid	69.28	71.53
KXG34945	Sorghum	mitochondrion, plastid	69.98	71.35
Zm00001d005151_P004	Maize	plastid	69.81	70.8
Os07t0300900-02	Rice	plastid	71.03	70.78
GSMUA_AchrUn_...	Banana	vacuole	16.4	70.68
Os01t0927900-01	Rice	mitochondrion	69.46	69.82
OQU88150	Sorghum	mitochondrion	67.02	69.19
TraesCS3B01G475900.2	Wheat	plastid	67.71	68.92
TraesCS3D01G434800.1	Wheat	plastid	67.54	68.5
TraesCS3A01G442100.2	Wheat	plastid	67.36	68.08
VIT_14s0068g01190.t01	Wine grape	cytosol	77.14	67.58
PGSC0003DMT400058635	Potato	cytosol	68.41	67.35
HORVU3Hr1G096500.10	Barley	plastid	68.06	67.13
Zm00001d042264_P006	Maize	mitochondrion, plastid	66.49	65.8
VIT_03s0038g02730.t01	Wine grape	plastid	16.93	62.18
VIT_03s0097g00380.t01	Wine grape	extracellular	6.98	55.56
HORVU5Hr1G121700.2	Barley	cytosol	23.21	45.55
Zm00001d035282_P001	Maize	mitochondrion	23.56	44.41
GSMUA_AchrUn_...	Banana	plastid	18.67	42.46
HORVU5Hr1G121650.2	Barley	cytosol	28.97	41.71
TraesCS7B01G461700.1	Wheat	nucleus	46.42	26.16
TraesCS5B01G550800.1	Wheat	nucleus	41.19	22.93
VIT_18s0001g03660.t01	Wine grape	mitochondrion, plastid	23.56	15.5
VIT_06s0009g01460.t01	Wine grape	mitochondrion, plastid	2.44	4.0

Protein Annotations

KEGG:00260+2.7.2.4	KEGG:00261+2.7.2.4	KEGG:00270+2.7.2.4	KEGG:00300+2.7.2.4	Gene3D:1.20.120.1320	EntrezGene:100267777
wikigene:100267777	Gene3D:3.30.70.260	Gene3D:3.40.1160.10	MapMan:4.1.2.2.1	InterPro:ACT_dom	InterPro:AceGlu_kinase-like_sf
InterPro:Asp/Glu/Uridylate_kinase	InterPro:Asp_kinase	InterPro:Aspartate_kinase_CS	ProteinID:CCB59116	ProteinID:CCB59116.1	UniProt:F6HWQ2
EMBL:FN596277	GO:GO:0003674	GO:GO:0003824	GO:GO:0004072	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009088	GO:GO:0009089	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	InterPro:IPR002912	InterPro:IPR036393	EntrezGene:LOC100267777	wikigene:LOC100267777
PFAM:PF00696	ScanProsite:PS00324	PFscan:PS51671	PANTHER:PTHR21499	PANTHER:PTHR21499:SF40	SUPFAM:SSF53633
SUPFAM:SSF55021	TIGRFAMs:TIGR00657	UniParc:UPI0001982A90	ArrayExpress:VIT_01s0244g00140	EnsemblPlantsGene:VIT_01s0244g00140	EnsemblPlants:VIT_01s0244g00140.t01
RefSeq:XP_002267220	RefSeq:XP_002267220.2	RefSeq:XP_010656841.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr1:+:21705274..21716506

Molecular Weight (calculated)

62523.5 Da

IEP (calculated)

5.201

GRAVY (calculated)

0.104

Length

573 amino acids

Sequence
(BLAST)

001: MAGSVHFSGV RTPLLIKKAC FSRFPSLSKS SNRIEFSASA ISSSGLFAAF GDGCRRRVLR VGCKKGVEAV LREEASENES SDDNVEKLAC VMKFGGSSLA
101: SAERMREVAD LVLQFRDERP VIVLSAMGKT TNNLLLAGEK AVSCGVSNAS EIDELSLVKE LHLRTVQELG LDSSVISGHL EELEQLLKGI AMMKELTFRT
201: TDYLVSFGEC MSTRIFAAYL NKIGAKARQY DAFDIGFITT DDFTNADILE ATYPAVAKRL YNDWINDPAI PIVTGFLGKG WKSGAVTTLG RGGSDLTATA
301: IGRALGLQEI QVWKDVDGVL TCDPSIYPRA LPVPYLTFDE AAELAYFGAQ VLHPQAMRPA RESDIPVRVK NSYNPEAPGT LINKTRDMSK AVLTSIVLKR
401: NVTMLDIVST RMLGQFGFLA KVFSIFEDLG ISVDVVATSE VSISLTLDPS KLWSRELIQQ ELDHVVEELE KIAVVNLLQH RSIISLIGNI QRSSLILEKA
501: FNVLRTIGVN VQMISQGASK VNISLIVNDS EAEQCVKALH HAFFEIGDLF ELMILDGGVE NGSALPLTVE NQL

Best Arabidopsis Sequence Match ( AT5G13280.1 )
(BLAST)

001: MAATRVRCCH SNAAFTRLPL TRHRNSPTLP ISLNRVDFPT LKKLSLPIGD GSSIRKVSGS GSRNIVRAVL EEKKTEAITE VDEKGITCVM KFGGSSVASA
101: ERMKEVADLI LTFPEESPVI VLSAMGKTTN NLLLAGEKAV SCGVSNASEI EELSIIKELH IRTVKELNID PSVILTYLEE LEQLLKGIAM MKELTLRTRD
201: YLVSFGECLS TRIFAAYLNT IGVKARQYDA FEIGFITTDD FTNGDILEAT YPAVAKRLYD DWMHDPAVPI VTGFLGKGWK TGAVTTLGRG GSDLTATTIG
301: KALGLKEIQV WKDVDGVLTC DPTIYKRATP VPYLTFDEAA ELAYFGAQVL HPQSMRPARE GEIPVRVKNS YNPKAPGTII TKTRDMTKSI LTSIVLKRNV
401: TMLDIASTRM LGQVGFLAKV FSIFEELGIS VDVVATSEVS ISLTLDPSKL WSRELIQQEL DHVVEELEKI AVVNLLKGRA IISLIGNVQH SSLILERAFH
501: VLYTKGVNVQ MISQGASKVN ISFIVNEAEA EGCVQALHKS FFESGDLSEL LIQPRLGNGS PVRTLQVEN

Arabidopsis Description

AK1AK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.