Factsheet for TraesCS5D01G487000.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6A01G074100.1
TraesCSU01G086500.1
TraesCSU01G123400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13280.1	TraesCS6A01G074100.1	AT5G60340.1	21798944
AT5G13280.1	TraesCSU01G086500.1	AT5G60340.1	21798944
AT5G13280.1	TraesCSU01G123400.1	AT5G60340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G547400.1	Wheat	plastid	97.69	98.21
HORVU5Hr1G121250.1	Barley	plastid	96.8	96.97
TraesCS5D01G534600.1	Wheat	plastid	95.02	94.35
Os03t0850400-01	Rice	cytosol, mitochondrion, plastid	83.27	87.15
EER93093	Sorghum	plastid	86.48	85.87
Zm00001d034851_P001	Maize	plastid	64.23	84.74
GSMUA_AchrUn_...	Banana	vacuole	18.15	76.69
KRH70062	Soybean	plastid	73.13	73.13
VIT_01s0244g00140.t01	Wine grape	plastid	73.49	72.08
KRH08407	Soybean	plastid	72.24	71.86
Solyc01g005240.2.1	Tomato	plastid	72.06	71.68
TraesCS3D01G434800.1	Wheat	plastid	71.35	70.97
Bra006235.1-P	Field mustard	plastid	67.44	70.58
CDX78557	Canola	plastid	67.44	70.58
KRH06839	Soybean	plastid	70.28	70.41
KRG94687	Soybean	plastid	70.28	70.28
AT5G13280.1	Thale cress	plastid	70.82	69.95
AT5G14060.1	Thale cress	plastid	67.26	69.49
CDX70538	Canola	plastid	67.44	69.41
CDY09781	Canola	plastid	67.26	68.73
CDX69652	Canola	plastid	67.08	68.42
Bra008840.1-P	Field mustard	plastid	67.08	68.42
AT3G02020.1	Thale cress	plastid	67.97	68.34
Bra023401.1-P	Field mustard	plastid	67.08	68.05
CDX85659	Canola	plastid	67.08	68.05
CDX91135	Canola	plastid	66.9	67.75
PGSC0003DMT400058635	Potato	cytosol	67.97	65.64
CDY06621	Canola	plastid	65.84	64.24
CDY20797	Canola	plastid	65.84	64.01
Bra035544.1-P	Field mustard	plastid	65.48	63.67
VIT_14s0068g01190.t01	Wine grape	cytosol	73.49	63.15
CDX70539	Canola	mitochondrion	9.96	60.22
TraesCS5D01G181600.4	Wheat	plastid	26.69	16.39
Solyc11g040380.1.1	Tomato	plastid	1.96	9.57
TraesCS5D01G149900.1	Wheat	mitochondrion, vacuole	3.2	4.68

Protein Annotations

KEGG:00260+2.7.2.4	KEGG:00261+2.7.2.4	KEGG:00270+2.7.2.4	KEGG:00300+2.7.2.4	Gene3D:1.20.120.1320	Gene3D:3.30.70.260
Gene3D:3.40.1160.10	MapMan:4.1.2.2.1	InterPro:ACT_dom	InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase	InterPro:Asp_kinase
InterPro:Aspartate_kinase_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004072	GO:GO:0008150	GO:GO:0008152
GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	InterPro:IPR002912
InterPro:IPR036393	PFAM:PF00696	PFAM:PF01842	ScanProsite:PS00324	PFscan:PS51671	PANTHER:PTHR21499
PANTHER:PTHR21499:SF40	SUPFAM:SSF53633	SUPFAM:SSF55021	TIGRFAMs:TIGR00657	EnsemblPlantsGene:TraesCS5D01G487000	EnsemblPlants:TraesCS5D01G487000.2
TIGR:cd04244	TIGR:cd04933	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5D:+:522032485..522037181

Molecular Weight (calculated)

60221.9 Da

IEP (calculated)

7.473

GRAVY (calculated)

0.136

Length

562 amino acids

Sequence
(BLAST)

001: MATALRLAAV ARDSPAAVSK LGRERASLCA IARPGGQCFA RRGLVLRCQS GAAAAAATIS KGGAADGAGA AAGFTVVMKF GGSSLASAAR MREVADLILS
101: FPEETPVVVL SAMGKTTNNL LLAGEKAVSC GAPKASEINE LAVIKKLHLR TIDELGLDSS IVSGFLDELE QLLKGVAMMK ELTLRTRDYL VSFGECMSTR
201: IFSAYLNKLG KKARQYDAFD LGFITTDDFT NADILEATYP AVAKRLHGDW IDDPAIPIVT GFLGKGWKSC AVTTLGRGGS DLTATTIGKA LGLREIQVWK
301: DVDGVLTCDP NIYANAVPVP YLTFDEAAEL AYFGAQVLHP QSMRPAREGG IPVRVKNSYN RHAPGTVITK TRDMRKSILT SIVLKSNITM LDIVSTRMLG
401: QYGFLAKVFS IFEDLGISVD SVATSEVSIS LTLDPSKLWS RELIQQELDH VVEELEKIAV VHLLQHRSII SLIGNVQRSS LILEKAFNVL RRNGVNVQMI
501: SQGASKQVNI SLVVNDSEAK QCVQALHSAF FENGFLSEVE EADLAQNMAP VLVSSNGAIN GN

Best Arabidopsis Sequence Match ( AT5G13280.1 )
(BLAST)

001: MAATRVRCCH SNAAFTRLPL TRHRNSPTLP ISLNRVDFPT LKKLSLPIGD GSSIRKVSGS GSRNIVRAVL EEKKTEAITE VDEKGITCVM KFGGSSVASA
101: ERMKEVADLI LTFPEESPVI VLSAMGKTTN NLLLAGEKAV SCGVSNASEI EELSIIKELH IRTVKELNID PSVILTYLEE LEQLLKGIAM MKELTLRTRD
201: YLVSFGECLS TRIFAAYLNT IGVKARQYDA FEIGFITTDD FTNGDILEAT YPAVAKRLYD DWMHDPAVPI VTGFLGKGWK TGAVTTLGRG GSDLTATTIG
301: KALGLKEIQV WKDVDGVLTC DPTIYKRATP VPYLTFDEAA ELAYFGAQVL HPQSMRPARE GEIPVRVKNS YNPKAPGTII TKTRDMTKSI LTSIVLKRNV
401: TMLDIASTRM LGQVGFLAKV FSIFEELGIS VDVVATSEVS ISLTLDPSKL WSRELIQQEL DHVVEELEKI AVVNLLKGRA IISLIGNVQH SSLILERAFH
501: VLYTKGVNVQ MISQGASKVN ISFIVNEAEA EGCVQALHKS FFESGDLSEL LIQPRLGNGS PVRTLQVEN

Arabidopsis Description

AK1AK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.