CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX71036
CDX80174
CDX88754
CDY31552

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13280.1	CDX71036	AT5G60340.1	21798944
AT5G13280.1	CDX80174	AT5G60340.1	21798944
AT5G13280.1	CDX88754	AT5G60340.1	21798944
AT5G13280.1	CDY31552	AT5G60340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023401.1-P	Field mustard	plastid	100.0	100.0
CDX91135	Canola	plastid	96.75	96.58
CDX69652	Canola	plastid	91.34	91.83
CDY09781	Canola	plastid	91.16	91.82
AT5G13280.1	Thale cress	plastid	87.36	85.06
GSMUA_Achr8P09140_001	Banana	cytosol	63.72	72.48
Zm00001d029179_P001	Maize	extracellular	7.94	69.84
GSMUA_AchrUn_...	Banana	plastid	54.15	69.77
VIT_01s0244g00140.t01	Wine grape	plastid	71.66	69.28
Os03t0850400-01	Rice	cytosol, mitochondrion, plastid	66.43	68.53
TraesCS4A01G337800.1	Wheat	plastid	68.59	68.22
Solyc01g005240.2.1	Tomato	plastid	69.13	67.79
Zm00001d018301_P001	Maize	extracellular, plasma membrane	29.96	67.76
HORVU5Hr1G121250.1	Barley	plastid	68.59	67.74
TraesCS5B01G547400.1	Wheat	plastid	68.23	67.62
CDX78557	Canola	plastid	65.52	67.6
TraesCS5D01G487000.2	Wheat	plastid	68.05	67.08
TraesCS5D01G534600.1	Wheat	plastid	68.41	66.96
CDX70538	Canola	plastid	65.52	66.48
EER93093	Sorghum	plastid	67.87	66.43
Zm00001d034851_P001	Maize	plastid	50.9	66.2
Zm00001d037282_P001	Maize	plastid	19.31	66.05
PGSC0003DMT400058635	Potato	cytosol	68.77	65.46
Os07t0300900-02	Rice	plastid	67.69	65.22
KXG34945	Sorghum	mitochondrion, plastid	65.52	64.59
Zm00001d005151_P004	Maize	plastid	65.7	64.42
OQU88150	Sorghum	mitochondrion	64.44	64.32
Os01t0927900-01	Rice	mitochondrion	65.7	63.86
TraesCS3B01G475900.2	Wheat	plastid	64.44	63.41
GSMUA_AchrUn_...	Banana	vacuole	15.16	63.16
TraesCS3D01G434800.1	Wheat	plastid	64.08	62.83
TraesCS3A01G442100.2	Wheat	plastid	64.08	62.61
HORVU3Hr1G096500.10	Barley	plastid	64.98	61.96
CDY20797	Canola	plastid	64.62	61.94
CDY06621	Canola	plastid	64.26	61.81
Zm00001d042264_P006	Maize	mitochondrion, plastid	63.9	61.14
CDX70539	Canola	mitochondrion	9.75	58.06
Zm00001d035282_P001	Maize	mitochondrion	24.37	44.41
GSMUA_AchrUn_...	Banana	plastid	17.51	38.49
HORVU5Hr1G121700.2	Barley	cytosol	20.22	38.36
HORVU5Hr1G121650.2	Barley	cytosol	27.44	38.19
TraesCS7B01G461700.1	Wheat	nucleus	44.22	24.09
TraesCS5B01G550800.1	Wheat	nucleus	40.43	21.77
CDY02370	Canola	plastid	24.55	14.96
CDY59140	Canola	plastid	24.73	14.91
CDY51915	Canola	plastid	24.73	14.86
CDY51625	Canola	plastid	24.19	14.71
CDY16591	Canola	mitochondrion	2.71	3.97
CDX92414	Canola	mitochondrion	2.71	3.86
CDY51912	Canola	cytosol	1.26	3.32

Protein Annotations

KEGG:00260+2.7.2.4	KEGG:00261+2.7.2.4	KEGG:00270+2.7.2.4	KEGG:00300+2.7.2.4	Gene3D:1.20.120.1320	Gene3D:3.30.70.260
Gene3D:3.40.1160.10	MapMan:4.1.2.2.1	GO:A0A078DBH1	InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase	InterPro:Asp_kinase
InterPro:Aspartate_kinase_CS	EnsemblPlants:CDX85659	ProteinID:CDX85659	ProteinID:CDX85659.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004072	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00143393001	InterPro:IPR036393	PFAM:PF00696	ScanProsite:PS00324
PANTHER:PTHR21499	PANTHER:PTHR21499:SF40	MetaCyc:PWY-2941	MetaCyc:PWY-2942	MetaCyc:PWY-5097	MetaCyc:PWY-6559
MetaCyc:PWY-6562	MetaCyc:PWY-7153	SUPFAM:SSF53633	SUPFAM:SSF55021	TIGRFAMs:TIGR00657	UniPathway:UPA00034
UniPathway:UPA00050	UniPathway:UPA00051	UniParc:UPI000254347F	:	:	:

Description

BnaA02g01540D

Coordinates

chrLK031842:-:1048206..1051413

Molecular Weight (calculated)

60481.0 Da

IEP (calculated)

5.764

GRAVY (calculated)

-0.007

Length

554 amino acids

Sequence
(BLAST)

001: MAAAARVQCH NNTSLTGSPL PRRRRNSPTL HFSPNRVNFT PLKWIGDGSS SCTRMVSGPS LKGGTTTVRA ALEEEKKTDA VSEVVEEEKR FTCVMKFGGS
101: SVATAERMRE VADLVLTFPE ESPVIVLSAM GKTTNNLLLA GEKAVSCGVS NASEIEELSV IKELHLRTVK ELEIDPSVVS SFLEELEQLL KGIAMMKELT
201: LRTRDYLVSF GECLSTRIFA AYLNKIGVKA RQYDAFEIGF ITTDDFTNGD ILEATYPAVA KRLYDDWMDD PAVPVVTGFL GKGWKTCAVT TLGRGGSDLT
301: ATTIGKALGL QEIQVWKDVD GVLTCDPTIY KRATPVPFLT FDEAAELAYF GAQVLHPQSM RPAREGGIPV RVKNSYNPKA PGTIITKTRD MTKTVLTSIV
401: LKRNVTMLDI ASTRMLGQVG FLAKVFSIFE DLEISVDVVA TSEELDHVVE ELEKIAVVNL AKGRAIISLI GNVQHSSLIL ERAFHVLWTK GINVQMISQG
501: ASKVNISLIV NDAEAEGCVE ALHKSFFESG DLSELLIQPR LGNGSPVRTM QVEN

Best Arabidopsis Sequence Match ( AT5G13280.1 )
(BLAST)

001: MAATRVRCCH SNAAFTRLPL TRHRNSPTLP ISLNRVDFPT LKKLSLPIGD GSSIRKVSGS GSRNIVRAVL EEKKTEAITE VDEKGITCVM KFGGSSVASA
101: ERMKEVADLI LTFPEESPVI VLSAMGKTTN NLLLAGEKAV SCGVSNASEI EELSIIKELH IRTVKELNID PSVILTYLEE LEQLLKGIAM MKELTLRTRD
201: YLVSFGECLS TRIFAAYLNT IGVKARQYDA FEIGFITTDD FTNGDILEAT YPAVAKRLYD DWMHDPAVPI VTGFLGKGWK TGAVTTLGRG GSDLTATTIG
301: KALGLKEIQV WKDVDGVLTC DPTIYKRATP VPYLTFDEAA ELAYFGAQVL HPQSMRPARE GEIPVRVKNS YNPKAPGTII TKTRDMTKSI LTSIVLKRNV
401: TMLDIASTRM LGQVGFLAKV FSIFEELGIS VDVVATSEVS ISLTLDPSKL WSRELIQQEL DHVVEELEKI AVVNLLKGRA IISLIGNVQH SSLILERAFH
501: VLYTKGVNVQ MISQGASKVN ISFIVNEAEA EGCVQALHKS FFESGDLSEL LIQPRLGNGS PVRTLQVEN

Arabidopsis Description

AK1AK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.