CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59140	Canola	plastid	98.81	99.13
Bra013425.1-P	Field mustard	plastid	99.13	99.02
AT4G19710.2	Thale cress	plastid	94.03	94.65
CDY51912	Canola	cytosol	21.15	92.42
VIT_18s0001g03660.t01	Wine grape	mitochondrion, plastid	75.27	79.68
GSMUA_Achr5P01800_001	Banana	vacuole	62.58	78.61
CDY02370	Canola	plastid	75.27	76.35
KRH58834	Soybean	endoplasmic reticulum, plastid	75.81	76.31
KRH42738	Soybean	nucleus, plastid	75.81	76.31
CDY51625	Canola	plastid	75.27	76.18
KRG97357	Soybean	cytoskeleton, cytosol, peroxisome	51.52	73.76
GSMUA_Achr4P28160_001	Banana	plastid	73.43	72.72
Solyc11g040390.1.1	Tomato	plastid	64.43	72.53
PGSC0003DMT400083218	Potato	plastid	72.23	72.23
Solyc06g064550.2.1	Tomato	plastid	71.69	71.93
Os08t0342400-02	Rice	plastid	71.69	71.77
EER96488	Sorghum	plastid	71.15	71.54
Os09t0294000-01	Rice	plasma membrane	70.5	71.04
TraesCS5A01G177400.1	Wheat	golgi	70.28	70.82
Zm00001d019988_P001	Maize	plastid	70.39	70.77
TraesCS5D01G181600.4	Wheat	plastid	69.96	70.49
TraesCS5B01G174600.1	Wheat	plastid	69.85	70.38
HORVU5Hr1G053950.1	Barley	plastid	69.85	68.88
Zm00001d050134_P001	Maize	plastid	43.93	65.32
Zm00001d005535_P002	Maize	plastid	62.47	53.68
GSMUA_Achr5P01810_001	Banana	plastid	12.26	44.66
CDY16591	Canola	mitochondrion	12.69	30.95
CDX92414	Canola	mitochondrion	12.47	29.56
CDY09781	Canola	plastid	15.29	25.64
CDX69652	Canola	plastid	15.29	25.59
CDX78557	Canola	plastid	14.86	25.51
CDX70538	Canola	plastid	15.08	25.46
CDX91135	Canola	plastid	14.97	24.86
CDX85659	Canola	plastid	14.86	24.73
CDY20797	Canola	plastid	14.75	23.53
CDY06621	Canola	plastid	14.43	23.09
CDX70539	Canola	mitochondrion	1.63	16.13

Protein Annotations

KEGG:00260+1.1.1.3	KEGG:00260+2.7.2.4	KEGG:00261+2.7.2.4	KEGG:00270+1.1.1.3	KEGG:00270+2.7.2.4	KEGG:00300+1.1.1.3
KEGG:00300+2.7.2.4	Gene3D:3.30.2130.10	Gene3D:3.30.360.10	Gene3D:3.40.1160.10	Gene3D:3.40.50.720	MapMan:4.1.2.2.4
GO:A0A078ILF2	UniProt:A0A078ILF2	InterPro:ACT_dom	InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase	InterPro:Asp/hSer_DH_NAD-bd
InterPro:Asp_kinase	InterPro:Aspartate_kinase_CS	InterPro:CASTOR_ACT_dom	EnsemblPlants:CDY51915	ProteinID:CDY51915	ProteinID:CDY51915.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004072	GO:GO:0005488	GO:GO:0006520
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016491	GO:GO:0016740	GO:GO:0050661	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00004498001
InterPro:HDH_CS	InterPro:HDH_cat	InterPro:IPR002912	InterPro:IPR036393	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00696
PFAM:PF00742	PFAM:PF01842	PFAM:PF03447	PFAM:PF13840	ScanProsite:PS00324	ScanProsite:PS01042
PFscan:PS51671	PANTHER:PTHR43070	PANTHER:PTHR43070:SF2	MetaCyc:PWY-2941	MetaCyc:PWY-2942	MetaCyc:PWY-5097
MetaCyc:PWY-6559	MetaCyc:PWY-6562	MetaCyc:PWY-7153	SUPFAM:SSF51735	SUPFAM:SSF53633	SUPFAM:SSF55021
SUPFAM:SSF55347	TIGRFAMs:TIGR00657	UniPathway:UPA00034	UniPathway:UPA00050	UniPathway:UPA00051	UniParc:UPI0004EE6C86
SEG:seg	:	:	:	:	:

Description

BnaC01g41040DBnaC01g41040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILF2]

Coordinates

chrLK033039:-:34292..39460

Molecular Weight (calculated)

100413.0 Da

IEP (calculated)

7.339

GRAVY (calculated)

-0.054

Length

922 amino acids

Sequence
(BLAST)

001: MATIQPSFAV SPASSNPIRF GCFAPQCFVR VSKPPCSRRR LVSTTSFQRK IGGGGGGLIR CELPDFHLSA TATTVAGVST ENAVDRVQIP KGEMWSVHKF
101: GGTCVGNSQR IRNVAEVIIN DNSERKLVVV SAMSKVTDMM YDLIRKAQSR DDSYLSALEA VLEKHRLTAR DLLDGDDLAS FLSHLHDDIS NLTAMLRAIY
201: IAGHASESFS DFVAGHGELW SAQMLSYVVR KTGLECKWMD TRDVLIVNPT SSNQVDPDFG ESEKRLDKWF SLNPSKIIIA TGFIASTPQN IPTTLKRDGS
301: DFSAAIIGAI LRARQVTIWT DVDGVYSADP RKVNEAVILK TLSYQEAWEM SYFGANVLHP RTIIPVMRYN IPIVIRNIFN LSAPGTIICQ PPEDDCDLKL
401: TTPVKGFATI DNLALINVEG TGMAGVPGTA SDIFGAVKDV GANVIMISQA SSEHSICFAV PEKEVNAVSE ALRSRFSEAL KAGRLSQIEV IPNCSILAAV
501: GQKMASTPGV SCTLFSALAK ANINVRAISQ GCSEYNVTVV IKREDSVKAL RAVHSRFFLS RTTLAVGIIG PGLIGATLLD QLRDQAGVLK EEFNIDLRVL
601: GITSSKTMLL SDIGIDLSRW RELLNEKGTE ANLDKFTQQV HGNHFIPNTV LVDCTADSGI ASNYYGWLRK GIHVITPNKK ANSGPLDQYL KLRDLQRKSY
701: THYFYEATVG AGLPIISTLR GLLETGDKIL RIEGICSGTL SYLFNNFVGD RSFSEVVAEA KKAGFTEPDP RDDLSGTDVA RKVIILARES GLKLDLADLP
801: IRSLVPEPLK GCASAEEFME KLPQYDGDLA KERLEAENSG EVLRYVGVVD AVNQKGTVEL RRYKKEHPFA QMAGSDNIIA FTTTRYKDHP LIVRGPGAGA
901: QVTAGGIFSD MLRLASYLGA PS

Best Arabidopsis Sequence Match ( AT4G19710.2 )
(BLAST)

001: MATLKPSFTV SPPNSNPIRF GSFPPQCFLR VPKPRRLILP RFRKTTGGGG GLIRCELPDF HLSATATTVS GVSTVNLVDQ VQIPKGEMWS VHKFGGTCVG
101: NSQRIRNVAE VIINDNSERK LVVVSAMSKV TDMMYDLIRK AQSRDDSYLS ALEAVLEKHR LTARDLLDGD DLASFLSHLH NDISNLKAML RAIYIAGHAS
201: ESFSDFVAGH GELWSAQMLS YVVRKTGLEC KWMDTRDVLI VNPTSSNQVD PDFGESEKRL DKWFSLNPSK IIIATGFIAS TPQNIPTTLK RDGSDFSAAI
301: MGALLRARQV TIWTDVDGVY SADPRKVNEA VILQTLSYQE AWEMSYFGAN VLHPRTIIPV MRYNIPIVIR NIFNLSAPGT IICQPPEDDY DLKLTTPVKG
401: FATIDNLALI NVEGTGMAGV PGTASDIFGC VKDVGANVIM ISQASSEHSV CFAVPEKEVN AVSEALRSRF SEALQAGRLS QIEVIPNCSI LAAVGQKMAS
501: TPGVSCTLFS ALAKANINVR AISQGCSEYN VTVVIKREDS VKALRAVHSR FFLSRTTLAM GIVGPGLIGA TLLDQLRDQA AVLKQEFNID LRVLGITGSK
601: KMLLSDIGID LSRWRELLNE KGTEADLDKF TQQVHGNHFI PNSVVVDCTA DSAIASRYYD WLRKGIHVIT PNKKANSGPL DQYLKLRDLQ RKSYTHYFYE
701: ATVGAGLPII STLRGLLETG DKILRIEGIC SGTLSYLFNN FVGDRSFSEV VTEAKNAGFT EPDPRDDLSG TDVARKVIIL ARESGLKLDL ADLPIRSLVP
801: EPLKGCTSVE EFMEKLPQYD GDLAKERLDA ENSGEVLRYV GVVDAVNQKG TVELRRYKKE HPFAQLAGSD NIIAFTTTRY KDHPLIVRGP GAGAQVTAGG
901: IFSDILRLAS YLGAPS

Arabidopsis Description

AKHSDH2Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O81852]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.