Factsheet for Zm00001d050134_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 22065420
plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0342400-02	Rice	plastid	81.61	54.94
Zm00001d019988_P001	Maize	plastid	76.77	51.91
Solyc11g040390.1.1	Tomato	plastid	64.52	48.84
GSMUA_Achr4P28160_001	Banana	plastid	70.81	47.15
KRH58834	Soybean	endoplasmic reticulum, plastid	66.61	45.09
VIT_18s0001g03660.t01	Wine grape	mitochondrion, plastid	63.23	45.01
KRH42738	Soybean	nucleus, plastid	66.29	44.87
GSMUA_Achr5P01800_001	Banana	vacuole	52.74	44.55
CDY59140	Canola	plastid	65.48	44.18
Bra013425.1-P	Field mustard	plastid	65.65	44.1
AT4G19710.2	Thale cress	plastid	65.0	44.0
CDY51915	Canola	plastid	65.32	43.93
Bra023169.1-P	Field mustard	plastid	63.55	43.34
CDY02370	Canola	plastid	63.39	43.23
CDY51625	Canola	plastid	63.39	43.14
AT1G31230.1	Thale cress	plastid	62.58	42.59
GSMUA_Achr5P01810_001	Banana	plastid	16.94	41.5
Solyc06g064550.2.1	Tomato	plastid	61.45	41.46
PGSC0003DMT400083218	Potato	plastid	61.61	41.43
Zm00001d005535_P002	Maize	plastid	69.52	40.17
KRG97357	Soybean	cytoskeleton, cytosol, peroxisome	31.94	30.75
Zm00001d037282_P001	Maize	plastid	6.94	26.54
Zm00001d018301_P001	Maize	extracellular, plasma membrane	10.32	26.12
Zm00001d034851_P001	Maize	plastid	16.77	24.41
Zm00001d005151_P004	Maize	plastid	21.45	23.54
Zm00001d042264_P006	Maize	mitochondrion, plastid	21.13	22.63
Zm00001d029179_P001	Maize	extracellular	2.26	22.22
Zm00001d035282_P001	Maize	mitochondrion	7.42	15.13
Zm00001d050133_P001	Maize	plastid	3.71	6.08
Zm00001d023278_P002	Maize	extracellular, vacuole	2.1	3.34

Protein Annotations

KEGG:00260+2.7.2.4	KEGG:00261+2.7.2.4	KEGG:00270+2.7.2.4	KEGG:00300+2.7.2.4	Gene3D:3.30.2130.10	Gene3D:3.40.1160.10
MapMan:4.1.2.2.4	UniProt:A0A1D6Q024	InterPro:ACT_dom	ProteinID:AQK52007.1	InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase
InterPro:Asp_kinase	InterPro:Aspartate_kinase_CS	InterPro:CASTOR_ACT_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004072
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009088	GO:GO:0009089
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR002912	InterPro:IPR036393
PFAM:PF00696	PFAM:PF01842	PFAM:PF13840	ScanProsite:PS00324	PFscan:PS51671	PANTHER:PTHR43070
PANTHER:PTHR43070:SF2	SUPFAM:SSF53633	SUPFAM:SSF55021	TIGRFAMs:TIGR00657	UniParc:UPI000844D4A6	EnsemblPlantsGene:Zm00001d050134
EnsemblPlants:Zm00001d050134_P001	EnsemblPlants:Zm00001d050134_T001	SEG:seg	:	:	:

Description

aspartate kinase-homoserine dehydrogenase1Bifunctional aspartokinase/homoserine dehydrogenase 2 chloroplastic

Coordinates

chr4:-:68237414..68255070

Molecular Weight (calculated)

67479.6 Da

IEP (calculated)

8.410

GRAVY (calculated)

0.061

Length

620 amino acids

Sequence
(BLAST)

001: MSVPPRQRHG SILILPLPLR FRPLAFVVMR SLTVASRHPG AAFSTRRRPL LHPAAAGRDS TFQRCWRWEK TQDSSFGSSL RTSRLPRTVH GDILKNLLAP
101: TAGAVSVEQA EAIADLPKGE MWSVHKFGGT CMGTSERIHN VADIVLRDPS ERKLVVVSAM SKVTDMMYNL VNKAQSRDDS YIAVLDEVFD KHMTTAKDLL
201: AGEDLARFLS QLHADISNLK AMLRAIYIAG HATESFSDFV VGHGELWSAQ MLSYAIQKSG TPCSWMDTRE VLVVNPSGAN QVDPDYLESE KRLEKWFSRC
301: PAETIIATGF IASTPENIPT TLKRDGSDFS AAIIGSLVKA RQVTIWTDVD GVFSADPRKV SEAVILSTLS YQEAWEMSYF GANVLHPRTI IPVMKYNIPI
401: VIRNIFNTSA PGTMICQQPA NENGDLEACV KAFATIDKLA LVNVEGTGMA GVPGTANAIF GAVKDVGANV IMISQASSEH SVCFAVPEKE VALVSAALHA
501: RFREALAAGR LSKVEVIHNC SILATVGLRM ASTPGVSATL FDALAKANIN VRAIAQGCSE YNITIVLKQE DCVRALRAAH SRFFLSKTTL AVGIIGPGLI
601: GRTLLNQLKD QNLEQLAIMY

Best Arabidopsis Sequence Match ( AT4G19710.1 )
(BLAST)

001: MATLKPSFTV SPPNSNPIRF GSFPPQCFLR VPKPRRLILP RFRKTTGGGG GLIRCELPDF HLSATATTVS GVSTVNLVDQ VQIPKGEMWS VHKFGGTCVG
101: NSQRIRNVAE VIINDNSERK LVVVSAMSKV TDMMYDLIRK AQSRDDSYLS ALEAVLEKHR LTARDLLDGD DLASFLSHLH NDISNLKAML RAIYIAGHAS
201: ESFSDFVAGH GELWSAQMLS YVVRKTGLEC KWMDTRDVLI VNPTSSNQVD PDFGESEKRL DKWFSLNPSK IIIATGFIAS TPQNIPTTLK RDGSDFSAAI
301: MGALLRARQV TIWTDVDGVY SADPRKVNEA VILQTLSYQE AWEMSYFGAN VLHPRTIIPV MRYNIPIVIR NIFNLSAPGT IICQPPEDDY DLKLTTPVKG
401: FATIDNLALI NVEGTGMAGV PGTASDIFGC VKDVGANVIM ISQASSEHSV CFAVPEKEVN AVSEALRSRF SEALQAGRLS QIEVIPNCSI LAAVGQKMAS
501: TPGVSCTLFS ALAKANINVR AISQGCSEYN VTVVIKREDS VKALRAVHSR FFLSRTTLAM GIVGPGLIGA TLLDQLRDQA AVLKQEFNID LRVLGITGSK
601: KMLLSDIGID LSRWRELLNE KGTEADLDKF TQQVHGNHFI PNSVVVDCTA DSAIASRYYD WLRKGIHVIT PNKKANSGPL DQYLKLRDLQ RKSYTHYFYE
701: ATVGAGLPII STLRGLLETG DKILRIEGIC SGTLSYLFNN FVGDRSFSEV VTEAKNAGFT EPDPRDDLSG TDVARKVIIL ARESGLKLDL ADLPIRSLVP
801: EPLKGCTSVE EFMEKLPQYD GDLAKERLDA ENSGEVRLFT TNVFPFDQCD HILTIYICM

Arabidopsis Description

AKHSDH2Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O81852]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.