Factsheet for Os08t0342400-02

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

plastid: 17189339

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0294000-01	Rice	plasma membrane	84.91	85.46
GSMUA_Achr5P01800_001	Banana	vacuole	65.58	82.29
Zm00001d050134_P001	Maize	plastid	54.94	81.61
GSMUA_Achr4P28160_001	Banana	plastid	77.74	76.91
VIT_18s0001g03660.t01	Wine grape	mitochondrion, plastid	70.79	74.86
KRH58834	Soybean	endoplasmic reticulum, plastid	72.96	73.36
KRH42738	Soybean	nucleus, plastid	72.86	73.25
CDY59140	Canola	plastid	71.99	72.14
Bra013425.1-P	Field mustard	plastid	72.2	72.05
AT4G19710.2	Thale cress	plastid	71.44	71.83
Solyc11g040390.1.1	Tomato	plastid	63.84	71.79
CDY51915	Canola	plastid	71.77	71.69
Bra023169.1-P	Field mustard	plastid	70.25	71.18
CDY02370	Canola	plastid	70.14	71.07
CDY51625	Canola	plastid	70.03	70.8
KRG97357	Soybean	cytoskeleton, cytosol, peroxisome	49.4	70.65
AT1G31230.1	Thale cress	plastid	69.49	70.25
Solyc06g064550.2.1	Tomato	plastid	69.82	69.97
PGSC0003DMT400083218	Potato	plastid	69.92	69.85
GSMUA_Achr5P01810_001	Banana	plastid	13.36	48.62
Os11t0128800-01	Rice	plasma membrane	14.12	33.85
Os12t0125400-01	Rice	plasma membrane	14.01	33.59
Os03t0850400-01	Rice	cytosol, mitochondrion, plastid	15.64	26.82
Os07t0300900-02	Rice	plastid	15.85	25.39
Os01t0927900-01	Rice	mitochondrion	14.77	23.86

Protein Annotations

KEGG:00260+1.1.1.3	KEGG:00260+2.7.2.4	KEGG:00261+2.7.2.4	KEGG:00270+1.1.1.3	KEGG:00270+2.7.2.4	KEGG:00300+1.1.1.3
KEGG:00300+2.7.2.4	Gene3D:3.30.2130.10	Gene3D:3.30.360.10	Gene3D:3.40.1160.10	Gene3D:3.40.50.720	MapMan:4.1.2.2.4
EntrezGene:4345328	InterPro:ACT_dom	InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase	InterPro:Asp/hSer_DH_NAD-bd	InterPro:Asp_kinase
InterPro:Aspartate_kinase_CS	ProteinID:BAD01718.1	ProteinID:BAT05006.1	InterPro:CASTOR_ACT_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004072	GO:GO:0004412	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009067	GO:GO:0009090	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016491	GO:GO:0016740	GO:GO:0050661	GO:GO:0055114
InterPro:HDH_CS	InterPro:HDH_cat	InterPro:IPR002912	InterPro:IPR036393	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os08g0342400
EnsemblPlants:Os08t0342400-02	PFAM:PF00696	PFAM:PF00742	PFAM:PF01842	PFAM:PF03447	PFAM:PF13840
ScanProsite:PS00324	ScanProsite:PS01042	PFscan:PS51671	PANTHER:PTHR43070	PANTHER:PTHR43070:SF2	UniProt:Q6ZD10
SUPFAM:SSF51735	SUPFAM:SSF53633	SUPFAM:SSF55021	SUPFAM:SSF55347	TIGRFAMs:TIGR00657	UniParc:UPI000021F8B2
RefSeq:XP_015650466.1	SEG:seg	:	:	:	:

Description

Similar to aspartate kinase-homoserine dehydrogenase. (Os08t0342400-01);Similar to Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplast precursor (AK-HD 1) (AK-HSDH 1) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)]. (Os08t0342400-02);Similar to Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplast precursor (AK-HD 1) (AK-HSDH 1) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)]. (Os08t0342400-03)

Coordinates

chr8:-:15438856..15450574

Molecular Weight (calculated)

99978.7 Da

IEP (calculated)

6.823

GRAVY (calculated)

-0.057

Length

921 amino acids

Sequence
(BLAST)

001: MWSLAVASPH PAAAFAAARP RRGPRPAAAP SHRGVNPQRW RCEKTQAWSF WSSLWASDLP GGLYGDVSKN MLKPAAAVSV EQAEASAHLP KGDMWSVHKF
101: GGTCMGTSQR IQNVADIILR DPSERKLVVV SAMSKVTDMM YNLVNKAQSR DDSYITALDE VFEKHMAAAK DLLGGEDLAR FLSQLHADVS NLKAMLRAIC
201: IAGHATESFS DFVVGHGEIW SAQLLSFAIK KSGTPCSWMD TREVLVVNPT GSNQVDPDYL ESEKRLEKWF ARQPAETIIA TGFIASTPEN IPTTLKRDGS
301: DFSAAIIGSL VKAGQVTIWT DVDGVFSADP RKVSEAVILS TLSYQEAWEM SYFGANVLHP RTIIPVMKYN IPIVIRNMFN ISAPGTMICQ QPANESGDLE
401: ACVKAFATID KLSLVNVEGT GMAGVPGTAS AIFGAVKDVG ANVIMISQAS SEHSVCFAVP EKEVAAVSAA LHVRFREALS AGRLSKVEVI HNCSILAAVG
501: LKMASTPGVS ATLFDALAKA NINVRAIAQG CSEYNITVVL KQEDCVRALR AAHSRFFLSK TTLAVGIIGP GLIGRTLLNQ LKDQAAVLKE NMNIDLRVMG
601: ITGSRTMVLS DTGIDLAHWK EQLQTEAEPA NLDKFVDHLS ENQLFPNRVL VDCTADTSVA SHYYDWLKKG IHVITPNKKA NSGPLDKYLK LRTLQRASYT
701: HYFYEATVGA GLPIISTLRG LLETGDKILR IEGIFSGTLS YIFNNFEGTR AFSDVVSEAK EAGYTEPDPR DDLSGTDVAR KVIILARESG LKLELSDIPV
801: RSLVPEALRS CSTADEYMQK LPSFDQDWAR ESKDAEAAGE VLRYVGVVDL VNKEGQVELR RYKKDHPFAQ LSGSDNIIAF TTSRYKEQPL IVRGPGAGAE
901: VTAGGVFSDI LRLASYLGAP S

Best Arabidopsis Sequence Match ( AT4G19710.2 )
(BLAST)

001: MATLKPSFTV SPPNSNPIRF GSFPPQCFLR VPKPRRLILP RFRKTTGGGG GLIRCELPDF HLSATATTVS GVSTVNLVDQ VQIPKGEMWS VHKFGGTCVG
101: NSQRIRNVAE VIINDNSERK LVVVSAMSKV TDMMYDLIRK AQSRDDSYLS ALEAVLEKHR LTARDLLDGD DLASFLSHLH NDISNLKAML RAIYIAGHAS
201: ESFSDFVAGH GELWSAQMLS YVVRKTGLEC KWMDTRDVLI VNPTSSNQVD PDFGESEKRL DKWFSLNPSK IIIATGFIAS TPQNIPTTLK RDGSDFSAAI
301: MGALLRARQV TIWTDVDGVY SADPRKVNEA VILQTLSYQE AWEMSYFGAN VLHPRTIIPV MRYNIPIVIR NIFNLSAPGT IICQPPEDDY DLKLTTPVKG
401: FATIDNLALI NVEGTGMAGV PGTASDIFGC VKDVGANVIM ISQASSEHSV CFAVPEKEVN AVSEALRSRF SEALQAGRLS QIEVIPNCSI LAAVGQKMAS
501: TPGVSCTLFS ALAKANINVR AISQGCSEYN VTVVIKREDS VKALRAVHSR FFLSRTTLAM GIVGPGLIGA TLLDQLRDQA AVLKQEFNID LRVLGITGSK
601: KMLLSDIGID LSRWRELLNE KGTEADLDKF TQQVHGNHFI PNSVVVDCTA DSAIASRYYD WLRKGIHVIT PNKKANSGPL DQYLKLRDLQ RKSYTHYFYE
701: ATVGAGLPII STLRGLLETG DKILRIEGIC SGTLSYLFNN FVGDRSFSEV VTEAKNAGFT EPDPRDDLSG TDVARKVIIL ARESGLKLDL ADLPIRSLVP
801: EPLKGCTSVE EFMEKLPQYD GDLAKERLDA ENSGEVLRYV GVVDAVNQKG TVELRRYKKE HPFAQLAGSD NIIAFTTTRY KDHPLIVRGP GAGAQVTAGG
901: IFSDILRLAS YLGAPS

Arabidopsis Description

AKHSDH2Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O81852]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.