CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02370	Canola	plastid	98.46	98.68
Bra023169.1-P	Field mustard	plastid	98.35	98.57
AT1G31230.1	Thale cress	plastid	93.74	93.74
CDY51912	Canola	cytosol	17.89	77.25
GSMUA_Achr5P01800_001	Banana	vacuole	62.24	77.25
CDY59140	Canola	plastid	76.62	75.95
CDY51915	Canola	plastid	76.18	75.27
GSMUA_Achr4P28160_001	Banana	plastid	73.0	71.43
EER96488	Sorghum	plastid	71.46	70.99
TraesCS5A01G177400.1	Wheat	golgi	71.13	70.82
Os09t0294000-01	Rice	plasma membrane	71.13	70.82
TraesCS5D01G181600.4	Wheat	plastid	71.02	70.71
TraesCS5B01G174600.1	Wheat	plastid	70.91	70.6
Os08t0342400-02	Rice	plastid	70.8	70.03
Zm00001d019988_P001	Maize	plastid	70.36	69.9
HORVU5Hr1G053950.1	Barley	plastid	70.58	68.77
Zm00001d050134_P001	Maize	plastid	43.14	63.39
Zm00001d005535_P002	Maize	plastid	62.24	52.84
GSMUA_Achr5P01810_001	Banana	plastid	12.29	44.27
CDY16591	Canola	mitochondrion	12.95	31.22
CDX92414	Canola	mitochondrion	12.84	30.08
CDX78557	Canola	plastid	14.82	25.14
CDX70538	Canola	plastid	14.93	24.91
CDX69652	Canola	plastid	14.82	24.5
CDY09781	Canola	plastid	14.71	24.36
CDX85659	Canola	plastid	14.71	24.19
CDX91135	Canola	plastid	14.6	23.96
CDY20797	Canola	plastid	15.04	23.7
CDY06621	Canola	plastid	14.71	23.26
CDX70539	Canola	mitochondrion	1.76	17.2

Protein Annotations

KEGG:00260+1.1.1.3	KEGG:00260+2.7.2.4	KEGG:00261+2.7.2.4	KEGG:00270+1.1.1.3	KEGG:00270+2.7.2.4	KEGG:00300+1.1.1.3
KEGG:00300+2.7.2.4	Gene3D:3.30.2130.10	Gene3D:3.30.360.10	Gene3D:3.40.1160.10	Gene3D:3.40.50.720	MapMan:4.1.2.2.4
GO:A0A078IKQ3	UniProt:A0A078IKQ3	InterPro:ACT_dom	InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase	InterPro:Asp/hSer_DH_NAD-bd
InterPro:Asp_kinase	InterPro:Aspartate_kinase_CS	InterPro:CASTOR_ACT_dom	EnsemblPlants:CDY51625	ProteinID:CDY51625	ProteinID:CDY51625.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004072	GO:GO:0005488
GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016491	GO:GO:0016740	GO:GO:0050661	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00003861001	InterPro:HDH_CS	InterPro:HDH_cat	InterPro:IPR002912	InterPro:IPR036393	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00696	PFAM:PF00742	PFAM:PF01842	PFAM:PF03447	PFAM:PF13840	ScanProsite:PS00324
ScanProsite:PS01042	PFscan:PS51671	PANTHER:PTHR43070	PANTHER:PTHR43070:SF2	MetaCyc:PWY-2941	MetaCyc:PWY-2942
MetaCyc:PWY-5097	MetaCyc:PWY-6559	MetaCyc:PWY-6562	MetaCyc:PWY-7153	SUPFAM:SSF51735	SUPFAM:SSF53633
SUPFAM:SSF55021	SUPFAM:SSF55347	TIGRFAMs:TIGR00657	UniPathway:UPA00034	UniPathway:UPA00050	UniPathway:UPA00051
UniParc:UPI0004EB6C51	SEG:seg	:	:	:	:

Description

BnaCnng21170DBnaCnng21170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IKQ3]

Coordinates

chrLK033013:-:31414..36113

Molecular Weight (calculated)

99081.8 Da

IEP (calculated)

7.227

GRAVY (calculated)

-0.039

Length

911 amino acids

Sequence
(BLAST)

001: MPVVSLAKIA SSPAVTAGDF TVPCIYGKRL VSNRVSFGNS RRRSPVSHRV RSELQSPRVL GSVTDLSLDN SVENGHLPKG DSWAVHKFGG TCVGNSERIK
101: DVADVVVNDG SSRKLVVVSA MAKVTDMMYD LIHRAQSRDD SYLSALDAVL EKHRATALEL LYGDELASFS ARLHNDINNL KAMLRAIYIA GHATESFSDF
201: VVGHGELWSA QMLAAVVRKS GLDCTWMDAR DVLVVVPNSS SQVDPDFAES EKRLEKWFSQ NSAGKIIIAT GFIASTPENI PTTLKRDGSD FSAAIMGALF
301: RSHQLTIWTD VDGVYSADPR KVSDAVILKT LSYQEAWEMS YFGANVLHPR TIIPVMKYDI PIVIRNIFNL SAPGTMICRQ IEDEDGYKLD APVKGFATID
401: NLALVNVEGT GMAGVPGTAS AIFSAVKEVG ANVIMISQAS SEHSVCFAVP EKEVKAVSEA LNSRFRQALA GGRLSQIEII PNCSILAAVG QKMASTPGVS
501: ATFFNALAKA NINIRAIAQG CSEFNITVVV KREDCIRALR AVHSRFYLSR TTLAVGIIGP GLIGGTLLDQ IRDQAAVLKE EFKIDLRVIG ITGSSKMLLS
601: ESGVDLSRWR ELMKEEGESA NIEKFTQYVK GNHFIPNSVI VDCTADADIA SSYYDWLLRG IHVVTPNKKA NSGPLDQYLK IRDLQRKSYT HYFYEATVGA
701: GLPIISTLRG LLETGDKILR IEGIFSGTLS YLFNNFVGNR SFSDVVAEAK QAGFTEPDPR DDLSGTDVAR KVTILARESG LKLDLDSLPV QSLVPKPLQA
801: CASAEEFMQK LPQFDEELSK QRQEAEAAGE VLRYVGVVDA VGKKGTVELK RYKKDHPFAQ LSGADNIIAF TTKRYKEQPL IVRGPGAGAQ VTAGGIFSDI
901: LRLAFYLGAP S

Best Arabidopsis Sequence Match ( AT1G31230.1 )
(BLAST)

001: MPVVSLAKVV TSPAVAGDLA VRVPFIYGKR LVSNRVSFGK LRRRSCIGQC VRSELQSPRV LGSVTDLALD NSVENGHLPK GDSWAVHKFG GTCVGNSERI
101: KDVAAVVVKD DSERKLVVVS AMSKVTDMMY DLIHRAESRD DSYLSALSGV LEKHRATAVD LLDGDELSSF LARLNDDINN LKAMLRAIYI AGHATESFSD
201: FVVGHGELWS AQMLAAVVRK SGLDCTWMDA RDVLVVIPTS SNQVDPDFVE SEKRLEKWFT QNSAKIIIAT GFIASTPQNI PTTLKRDGSD FSAAIMSALF
301: RSHQLTIWTD VDGVYSADPR KVSEAVVLKT LSYQEAWEMS YFGANVLHPR TIIPVMKYDI PIVIRNIFNL SAPGTMICRQ IDDEDGFKLD APVKGFATID
401: NLALVNVEGT GMAGVPGTAS AIFSAVKEVG ANVIMISQAS SEHSVCFAVP EKEVKAVSEA LNSRFRQALA GGRLSQIEII PNCSILAAVG QKMASTPGVS
501: ATFFNALAKA NINIRAIAQG CSEFNITVVV KREDCIRALR AVHSRFYLSR TTLAVGIIGP GLIGGTLLDQ IRDQAAVLKE EFKIDLRVIG ITGSSKMLMS
601: ESGIDLSRWR ELMKEEGEKA DMEKFTQYVK GNHFIPNSVM VDCTADADIA SCYYDWLLRG IHVVTPNKKA NSGPLDQYLK IRDLQRKSYT HYFYEATVGA
701: GLPIISTLRG LLETGDKILR IEGIFSGTLS YLFNNFVGTR SFSEVVAEAK QAGFTEPDPR DDLSGTDVAR KVTILARESG LKLDLEGLPV QNLVPKPLQA
801: CASAEEFMEK LPQFDEELSK QREEAEAAGE VLRYVGVVDA VEKKGTVELK RYKKDHPFAQ LSGADNIIAF TTKRYKEQPL IVRGPGAGAQ VTAGGIFSDI
901: LRLAFYLGAP S

Arabidopsis Description

AKHSDH1Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SA18]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.