CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002352.1-P	Field mustard	mitochondrion	96.56	96.56
CDX92414	Canola	mitochondrion	97.35	94.6
AT5G21060.2	Thale cress	mitochondrion, plastid	85.71	85.71
Solyc11g072010.1.1	Tomato	mitochondrion	72.49	73.07
VIT_06s0009g01460.t01	Wine grape	mitochondrion, plastid	66.93	72.29
KRG89878	Soybean	extracellular, plastid	70.9	71.28
TraesCS5B01G141000.2	Wheat	plastid	66.93	66.75
TraesCS5D01G149900.1	Wheat	mitochondrion, vacuole	67.2	65.97
PGSC0003DMT400070475	Potato	mitochondrion	72.75	65.63
TraesCS5A01G142200.1	Wheat	plastid	66.67	65.45
Os11t0128800-01	Rice	plasma membrane	65.34	64.32
Os12t0125400-01	Rice	plasma membrane	65.08	64.06
Zm00001d023278_P002	Maize	extracellular, vacuole	64.81	62.98
HORVU5Hr1G045450.2	Barley	peroxisome, plastid	66.67	58.88
EES15586	Sorghum	extracellular	47.62	57.51
CDY51912	Canola	cytosol	19.05	34.12
GSMUA_Achr8P09360_001	Banana	plastid	61.9	26.09
CDY51625	Canola	plastid	31.22	12.95
CDY02370	Canola	plastid	30.95	12.87
CDY59140	Canola	plastid	31.22	12.84
CDY51915	Canola	plastid	30.95	12.69
CDX69652	Canola	plastid	4.23	2.9
CDY09781	Canola	plastid	3.97	2.73
CDX85659	Canola	plastid	3.97	2.71
CDX91135	Canola	plastid	3.97	2.7
CDY06621	Canola	plastid	2.91	1.91
CDY20797	Canola	plastid	2.91	1.9
CDX78557	Canola	plastid	2.38	1.68
CDX70538	Canola	plastid	2.38	1.65
CDX70539	Canola	mitochondrion	0.26	1.08

Protein Annotations

KEGG:00260+1.1.1.3	KEGG:00270+1.1.1.3	KEGG:00300+1.1.1.3	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:35.1
GO:A0A078FUD3	UniProt:A0A078FUD3	InterPro:Asp/hSer_DH_NAD-bd	EnsemblPlants:CDY16591	ProteinID:CDY16591	ProteinID:CDY16591.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004412	GO:GO:0005488	GO:GO:0006520
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009082	GO:GO:0009086
GO:GO:0009088	GO:GO:0009097	GO:GO:0009987	GO:GO:0016491	GO:GO:0050661	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00094398001	InterPro:HDH_CS	InterPro:HDH_cat	InterPro:HDH_short	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00742
PFAM:PF03447	PIRSF:PIRSF036497	ScanProsite:PS01042	PANTHER:PTHR43070	PANTHER:PTHR43070:SF4	SUPFAM:SSF51735
SUPFAM:SSF55347	UniPathway:UPA00050	UniPathway:UPA00051	UniParc:UPI0004EE1BF4	SEG:seg	:

Description

BnaC09g36820DHomoserine dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A078FUD3]

Coordinates

chrLK032065:-:459604..462889

Molecular Weight (calculated)

40585.5 Da

IEP (calculated)

6.266

GRAVY (calculated)

0.049

Length

378 amino acids

Sequence
(BLAST)

001: MKKISVILMG CGGVGRQLLQ HIVSFRSLHA KMGVHLRVVG VSDSKSLAVP VDVLKEGLDD DLLSEVCSIK SAGSALTTLG ALGKGEYRVF NGSESIRETE
101: EIAQLLGKST GLVVVDCSAS SETVEILMKA VDLGCCVVLA NKKPLTSTLE HYDKLVLDPR RIRHESTVGA GLPVIASMNR IISSGDPVHS IVGSLSGTLG
201: YVMSELEDGR PLSQVVRAAK TLGYTEPDPR DDLSGMDVAR KALILARLLG KRIVMDSIKI ESLYPEEMRP GVMTVDDFLQ NGIAKLDQNI EERVKRASSN
301: GCVLRYVCMI EGSSVQVGIR EVPKDSPLGR LRGSDNIVEI RSRCYKEQPL VIQGAGAGND TTAAGVLADI IDMQDLFP

Best Arabidopsis Sequence Match ( AT5G21060.2 )
(BLAST)

001: MKKIPVLLMG CGGVGRHLLQ HIVSCRSLHA KMGVHIRVIG VCDSKSLVAP MDVLKEELND ELLSEVCLIK STGSALSKLG ALEKGGYRVV HDSELSTETE
101: EIAKLLGKST GLAVVDCSAS METIEILMKA VDLGCCIVLA NKKPVTSTLE HYDKLALHPR FIRHESTVGA GLPVIASLNR IISSGDPVHR IVGSLSGTLG
201: YVMSELEDGK PLSQVVQAAK KLGYTEPDPR DDLGGMDVAR KGLILARLLG KRIIMDSIKI ESLYPEEMGP GLMSVDDFLH NGIVKLDQNI EERVKKASSK
301: GCVLRYVCVI EGSSVQVGIR EVSKDSPLGR LRGSDNIVEI YSRCYKEQPL VIQGAGAGND TTAAGVLADI IDLQDLFH

Arabidopsis Description

Homoserine dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F4K6Y8]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.