Factsheet for GSMUA_Achr8P09360_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0009g01460.t01	Wine grape	mitochondrion, plastid	26.2	67.14
Zm00001d023278_P002	Maize	extracellular, vacuole	28.43	65.55
TraesCS5B01G141000.2	Wheat	plastid	27.65	65.44
TraesCS5D01G149900.1	Wheat	mitochondrion, vacuole	27.87	64.94
Os12t0125400-01	Rice	plasma membrane	27.65	64.58
TraesCS5A01G142200.1	Wheat	plastid	27.65	64.42
Os11t0128800-01	Rice	plasma membrane	27.54	64.32
KRG89878	Soybean	extracellular, plastid	26.76	63.83
Solyc11g072010.1.1	Tomato	mitochondrion	26.64	63.73
AT5G21060.2	Thale cress	mitochondrion, plastid	26.53	62.96
Bra002352.1-P	Field mustard	mitochondrion	26.09	61.9
CDY16591	Canola	mitochondrion	26.09	61.9
CDX92414	Canola	mitochondrion	26.09	60.15
HORVU5Hr1G045450.2	Barley	peroxisome, plastid	28.65	60.05
EES15586	Sorghum	extracellular	20.74	59.42
PGSC0003DMT400070475	Potato	mitochondrion	26.53	56.8
GSMUA_Achr5P01800_001	Banana	vacuole	17.95	21.93
GSMUA_Achr4P28160_001	Banana	plastid	21.18	20.41
GSMUA_Achr5P01810_001	Banana	plastid	3.23	11.46
GSMUA_Achr8P09140_001	Banana	cytosol	5.13	9.45
GSMUA_AchrUn_...	Banana	plastid	4.46	9.3
GSMUA_AchrUn_...	Banana	vacuole	1.0	6.77
GSMUA_AchrUn_...	Banana	plastid	1.9	6.75

Protein Annotations

KEGG:00260+1.1.1.3	KEGG:00270+1.1.1.3	KEGG:00300+1.1.1.3	Gene3D:1.25.40.10	Gene3D:3.30.360.10	Gene3D:3.40.50.720
MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004412	GO:GO:0005488	GO:GO:0005515
GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009082
GO:GO:0009086	GO:GO:0009088	GO:GO:0009097	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114
EnsemblPlantsGene:GSMUA_Achr8G09360_001	EnsemblPlants:GSMUA_Achr8P09360_001	EnsemblPlants:GSMUA_Achr8T09360_001	InterPro:HDH_CS	InterPro:HDH_cat	InterPro:IPR002885
InterPro:IPR011990	UniProt:M0TNY9	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00742	PFAM:PF01535	PFAM:PF13041
ScanProsite:PS01042	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF451	InterPro:Pentatricopeptide_repeat	SUPFAM:SSF51735
SUPFAM:SSF55347	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000295B38B	SEG:seg	:

Description

bifunctional aspartokinase/homoserine dehydrogenase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G09360_001]

Coordinates

chr8:-:6531991..6544632

Molecular Weight (calculated)

99189.7 Da

IEP (calculated)

6.574

GRAVY (calculated)

-0.033

Length

897 amino acids

Sequence
(BLAST)

001: MEAIKKLHSH LIVTGLYKHS SSPIFRVLIS YALSPPHLTH ARRVFEQVQE PNTFLWNTMI RGFARSEAPD DAILFYNLMR AQGVPQDHMS FPFALKACAR
101: ISAVREGSTV HAHCLKLGFL SDVFVSNSLV HLYSVCGDIS RASLYIEENS VEVDNMMTLN SMITTYAKAG DLVSARRIFD SMPERDLISW GSIITGCFQA
201: NHFSEALALF QQMQEAEVEP SEIVIVSVLS ACAHLGALNL GKWIHNYIRK KKIRADIYVG NSLIDMYSKC GCIMDAFEVF MEMKEKDTLS WNVIVFGLAA
301: NGYVNSALEV FTDMLREGFR PDDVTFLGVL NACARSGLVD KGLKYFASMK EVYGLEPQMK HYGCVVDLLS RSGELDKAYN FIKEMPMTPD LIIWRTLLRA
401: CHTHGSVDLA EIATEKLNEL DPSNNGNYML LSDTYASGNR WNDSMKVRET MEYTDVQKIP GCSSIEVTNL TDELTAAEMP LMVNKQGLGK TGRRPRGGGK
501: RDDGGHNHRD HTRFAVGLWR RRPRSPAPHR RLAPPSLQTG MSLPFSHLML FVMGLVLRVV GVCDSRSLLL VEDVATMGFD DAFLTEIYRI KSSSSSLSAL
601: VDFGHCHLFK DSEATTKILD IAGLLGRTTG LSVVDCTAST ETVGILKETV DLCCCIVLAN KKPLTCGIDD YDKLISNFRR IRFESTVGAG LPVIVSVTRV
701: LASGDPIYRI IGSLSGTLGY VMSEVEDGKS FSKVVLAAKS LGYTEPDPRD DLSGMDVARK ALILARLLGW RINMDDIQVE SLYSNEHGPN SMSTEDFLRI
801: GLPSLDRDVQ ERVSAASSRG KVLRYVCVIE GSRCQVGLQE LPKDSPLGRL RGSDNVVEIY SRCYKDSPLV IQGAGAGNDT TAAGVLADII DLQDLFH

Best Arabidopsis Sequence Match ( AT5G21060.1 )
(BLAST)

001: MKKIPVLLMG CGGVGRHLLQ HIVSCRSLHA KMGVHIRVIG VCDSKSLVAP MDVLKEELND ELLSEVCLIK STGSALSKLG ALGGYRVVHD SELSTETEEI
101: AKLLGKSTGL AVVDCSASME TIEILMKAVD LGCCIVLANK KPVTSTLEHY DKLALHPRFI RHESTVGAGL PVIASLNRII SSGDPVHRIV GSLSGTLGYV
201: MSELEDGKPL SQVVQAAKKL GYTEPDPRDD LGGMDVARKG LILARLLGKR IIMDSIKIES LYPEEMGPGL MSVDDFLHNG IVKLDQNIEE RVKKASSKGC
301: VLRYVCVIEG SSVQVGIREV SKDSPLGRLR GSDNIVEIYS RCYKEQPLVI QGAGAGNDTT AAGVLADIID LQDLFH

Arabidopsis Description

Homoserine dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F4K6Y8]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.