Factsheet for GSMUA_Achr4P28160_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P01800_001	Banana	vacuole	71.75	91.01
VIT_18s0001g03660.t01	Wine grape	mitochondrion, plastid	74.22	79.33
Os08t0342400-02	Rice	plastid	76.91	77.74
Os09t0294000-01	Rice	plasma membrane	75.83	77.16
Zm00001d019988_P001	Maize	plastid	75.4	76.55
EER96488	Sorghum	plastid	75.3	76.44
KRH58834	Soybean	endoplasmic reticulum, plastid	74.54	75.76
TraesCS5A01G177400.1	Wheat	golgi	74.22	75.52
TraesCS5D01G181600.4	Wheat	plastid	74.11	75.41
KRH42738	Soybean	nucleus, plastid	74.01	75.22
TraesCS5B01G174600.1	Wheat	plastid	73.79	75.08
AT4G19710.2	Thale cress	plastid	73.04	74.24
CDY59140	Canola	plastid	72.93	73.88
HORVU5Hr1G053950.1	Barley	plastid	74.11	73.8
Bra013425.1-P	Field mustard	plastid	73.15	73.78
KRG97357	Soybean	cytoskeleton, cytosol, peroxisome	50.81	73.45
CDY51915	Canola	plastid	72.72	73.43
Bra023169.1-P	Field mustard	plastid	71.64	73.38
CDY02370	Canola	plastid	71.64	73.38
CDY51625	Canola	plastid	71.43	73.0
AT1G31230.1	Thale cress	plastid	71.32	72.89
Solyc11g040390.1.1	Tomato	plastid	63.7	72.41
Solyc06g064550.2.1	Tomato	plastid	70.25	71.16
PGSC0003DMT400083218	Potato	plastid	70.46	71.15
Zm00001d050134_P001	Maize	plastid	47.15	70.81
Zm00001d005535_P002	Maize	plastid	67.35	58.43
GSMUA_Achr5P01810_001	Banana	plastid	15.57	57.31
GSMUA_Achr8P09140_001	Banana	cytosol	14.72	28.13
GSMUA_AchrUn_...	Banana	plastid	11.17	24.19
GSMUA_AchrUn_...	Banana	vacuole	3.33	23.31
GSMUA_Achr8P09360_001	Banana	plastid	20.41	21.18
GSMUA_AchrUn_...	Banana	plastid	4.94	18.25

Protein Annotations

KEGG:00260+1.1.1.3	KEGG:00260+2.7.2.4	KEGG:00261+2.7.2.4	KEGG:00270+1.1.1.3	KEGG:00270+2.7.2.4	KEGG:00300+1.1.1.3
KEGG:00300+2.7.2.4	Gene3D:3.30.2130.10	Gene3D:3.30.360.10	Gene3D:3.30.70.260	Gene3D:3.40.1160.10	Gene3D:3.40.50.720
MapMan:4.1.2.2.4	InterPro:ACT_dom	InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase	InterPro:Asp/hSer_DH_NAD-bd	InterPro:Asp_kinase
InterPro:Aspartate_kinase_CS	InterPro:CASTOR_ACT_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004072
GO:GO:0005488	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016491	GO:GO:0016740	GO:GO:0050661
GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr4G28160_001	EnsemblPlants:GSMUA_Achr4P28160_001	EnsemblPlants:GSMUA_Achr4T28160_001	InterPro:HDH_CS	InterPro:HDH_cat
InterPro:IPR002912	InterPro:IPR036393	UniProt:M0SSS8	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00696	PFAM:PF00742
PFAM:PF01842	PFAM:PF03447	PFAM:PF13840	ScanProsite:PS00324	ScanProsite:PS01042	PFscan:PS51671
PANTHER:PTHR43070	PANTHER:PTHR43070:SF2	SUPFAM:SSF51735	SUPFAM:SSF53633	SUPFAM:SSF55021	SUPFAM:SSF55347
TIGRFAMs:TIGR00657	UniParc:UPI0002954A0A	SEG:seg	:	:	:

Description

Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G28160_001]

Coordinates

chr4:+:26661671..26680403

Molecular Weight (calculated)

102120.0 Da

IEP (calculated)

7.402

GRAVY (calculated)

-0.126

Length

931 amino acids

Sequence
(BLAST)

001: MRTNAVFSPR PSSTVFLHHA PPRCSTDCSF RNLIPISQAT APRRQDGKIG GCSSPGRRRV VSERIRKGRY KNQIFASVAD VSLEQSIVDS PIPRGDMWSV
101: HKFGGTCMGT SKRIQSVADI ILSDSSERKL VVVSAMSKVT DTMYDLVNKA SSRDDSYITA IDNVFEKHML TAKELLDGED LARFLSQLYN DISNLKAMLR
201: AIYIAGHATE SFSDFVVGHG ELWSAQMLSY TIKKHGKPCC WMDTRDVLIV NPTSSNQVDP DYTESERRLG KWFVQQSADI IIATGFIAST PQNIPTTLKR
301: DGSDFSAAIL GALVRARQVT IWTDVDGVYS ADPRKVSEAV ILRTLSYQEA WEMSYFGANV LHPRTIIPVM NHAIPILIRN IFNLSAPGTM ICQPPVNENG
401: DKRSLESVVK AFATIDNLAL VNVEGTGMAG VPGTASAIFG TVKDVGANVI MISQASSEHS VCFAVPENEV KAVSAALHSR FRQALEAGRL SKACDLVEVI
501: PRCSILATVG QKMASTPGVS ATLFDALAKA NINVRAIAQG CSEYNITVVL KQEDCVRGLR AAHSRFYLSK TTLAMGIIGP GLIGGTLLDQ LRDQAASLKE
601: KFNIDLRVMG ITGSRTMVLS ETGIDLSKWR EIQKEKAEVA DLDKFAKHVH ENHFFPNTVL VDCTADTNVA NNYYDWLRNG IHVITPNKKA NSGPLDRYLK
701: LRMLQRLSYT HYFYEATVGA GLPIISTLRG LLETGDKILH IEGIFSGTLS YIFNNFEGTR AFSEVVSEAK EAGYTEPDPR DDLSGTDVAR KVIILARESG
801: LKLELSDIPV QSLVPEPLRA CSSPEEFMQQ LPNFDKELSE ERDAAEALGE VLRYVGVVDA VNEKGRVELR RYKREHPFAQ LSGSDNIIAF TTTRYKDQPL
901: IVRGPGAGAE VTAGGVFSDI LRLASYLGAP S

Best Arabidopsis Sequence Match ( AT4G19710.2 )
(BLAST)

001: MATLKPSFTV SPPNSNPIRF GSFPPQCFLR VPKPRRLILP RFRKTTGGGG GLIRCELPDF HLSATATTVS GVSTVNLVDQ VQIPKGEMWS VHKFGGTCVG
101: NSQRIRNVAE VIINDNSERK LVVVSAMSKV TDMMYDLIRK AQSRDDSYLS ALEAVLEKHR LTARDLLDGD DLASFLSHLH NDISNLKAML RAIYIAGHAS
201: ESFSDFVAGH GELWSAQMLS YVVRKTGLEC KWMDTRDVLI VNPTSSNQVD PDFGESEKRL DKWFSLNPSK IIIATGFIAS TPQNIPTTLK RDGSDFSAAI
301: MGALLRARQV TIWTDVDGVY SADPRKVNEA VILQTLSYQE AWEMSYFGAN VLHPRTIIPV MRYNIPIVIR NIFNLSAPGT IICQPPEDDY DLKLTTPVKG
401: FATIDNLALI NVEGTGMAGV PGTASDIFGC VKDVGANVIM ISQASSEHSV CFAVPEKEVN AVSEALRSRF SEALQAGRLS QIEVIPNCSI LAAVGQKMAS
501: TPGVSCTLFS ALAKANINVR AISQGCSEYN VTVVIKREDS VKALRAVHSR FFLSRTTLAM GIVGPGLIGA TLLDQLRDQA AVLKQEFNID LRVLGITGSK
601: KMLLSDIGID LSRWRELLNE KGTEADLDKF TQQVHGNHFI PNSVVVDCTA DSAIASRYYD WLRKGIHVIT PNKKANSGPL DQYLKLRDLQ RKSYTHYFYE
701: ATVGAGLPII STLRGLLETG DKILRIEGIC SGTLSYLFNN FVGDRSFSEV VTEAKNAGFT EPDPRDDLSG TDVARKVIIL ARESGLKLDL ADLPIRSLVP
801: EPLKGCTSVE EFMEKLPQYD GDLAKERLDA ENSGEVLRYV GVVDAVNQKG TVELRRYKKE HPFAQLAGSD NIIAFTTTRY KDHPLIVRGP GAGAQVTAGG
901: IFSDILRLAS YLGAPS

Arabidopsis Description

AKHSDH2Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O81852]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.