Factsheet for TraesCS5A01G177400.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

golgi: 23128297

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G181600.4	Wheat	plastid	99.56	99.56
TraesCS5B01G174600.1	Wheat	plastid	99.13	99.13
HORVU5Hr1G053950.1	Barley	plastid	97.05	94.97
Os09t0294000-01	Rice	plasma membrane	90.38	90.38
EER96488	Sorghum	plastid	88.74	88.55
Zm00001d019988_P001	Maize	plastid	87.65	87.46
GSMUA_Achr5P01800_001	Banana	vacuole	63.72	79.43
GSMUA_Achr4P28160_001	Banana	plastid	75.52	74.22
VIT_18s0001g03660.t01	Wine grape	mitochondrion, plastid	69.4	72.9
Bra023169.1-P	Field mustard	plastid	70.82	71.29
CDY02370	Canola	plastid	70.82	71.29
CDY51625	Canola	plastid	70.82	71.13
KRH58834	Soybean	endoplasmic reticulum, plastid	71.15	71.07
KRH42738	Soybean	nucleus, plastid	71.04	70.96
CDY59140	Canola	plastid	70.93	70.62
Bra013425.1-P	Field mustard	plastid	71.15	70.53
AT4G19710.2	Thale cress	plastid	70.6	70.52
CDY51915	Canola	plastid	70.82	70.28
AT1G31230.1	Thale cress	plastid	69.95	70.25
KRG97357	Soybean	cytoskeleton, cytosol, peroxisome	48.42	68.79
Solyc06g064550.2.1	Tomato	plastid	68.42	68.12
Solyc11g040390.1.1	Tomato	plastid	60.87	68.01
PGSC0003DMT400083218	Potato	plastid	68.42	67.9
Zm00001d005535_P002	Maize	plastid	77.27	65.89
GSMUA_Achr5P01810_001	Banana	plastid	13.22	47.83
TraesCS5A01G142200.1	Wheat	plastid	13.99	33.25
TraesCS4A01G337800.1	Wheat	plastid	16.28	26.75
TraesCS3A01G442100.2	Wheat	plastid	13.99	22.57

Protein Annotations

KEGG:00260+1.1.1.3	KEGG:00260+2.7.2.4	KEGG:00261+2.7.2.4	KEGG:00270+1.1.1.3	KEGG:00270+2.7.2.4	KEGG:00300+1.1.1.3
KEGG:00300+2.7.2.4	Gene3D:3.30.2130.10	Gene3D:3.30.360.10	Gene3D:3.40.1160.10	Gene3D:3.40.50.720	MapMan:4.1.2.2.4
InterPro:ACT_dom	InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase	InterPro:Asp/hSer_DH_NAD-bd	InterPro:Asp_kinase	InterPro:Aspartate_kinase_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004072	GO:GO:0005488	GO:GO:0006520
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016491	GO:GO:0016740	GO:GO:0050661	GO:GO:0055114	InterPro:HDH_CS	InterPro:HDH_cat
InterPro:IPR002912	InterPro:IPR036393	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00696	PFAM:PF00742	PFAM:PF01842
PFAM:PF03447	ScanProsite:PS00324	ScanProsite:PS01042	PFscan:PS51671	PANTHER:PTHR43070	PANTHER:PTHR43070:SF2
SUPFAM:SSF51735	SUPFAM:SSF53633	SUPFAM:SSF55021	SUPFAM:SSF55347	TIGRFAMs:TIGR00657	EnsemblPlantsGene:TraesCS5A01G177400
EnsemblPlants:TraesCS5A01G177400.1	TIGR:cd04257	TIGR:cd04921	TIGR:cd04922	SEG:seg	:

Description

No Description!

Coordinates

chr5A:-:374892076..374904918

Molecular Weight (calculated)

99645.5 Da

IEP (calculated)

6.792

GRAVY (calculated)

-0.057

Length

915 amino acids

Sequence
(BLAST)

001: MRSLAVASPV PPAAAHRRRL RPSASGREVV SQCLKCEINQ DRPMGALRIG HSQGNLPRHG SKNLLTPAAA AISVEQVEVS TYLPKGDMWS VHKFGGTCMG
101: TPQRIQNVAD VVLGDSSERK LIIVSAMSKV TDMMYSLVHK AQSRDDSYTE ELDKVFEKHM AAAKDLLDGE NLARFLSQLH SDISNLRAML RAIYIAGHAT
201: ESFSEFVVGH GELWSSQMLS YAVQKSGASC SWMDTREVLV VKPSGPDMVD PDYEESEKRL EKWFSRQPAE IIVATGFIAS TAENIPTTLK RDGSDFSAAI
301: IGSLVRARQV TIWTDVDGVF SADPRKVSEA VILSTLSYQE AWEMSYFGAN VLHPRTIIPV MKDNIPIVIR NMFNLSAPGT VICKQPANED ADLDACVKSF
401: ATIDKLALVN VEGTGMAGVP GTSSAIFSAV KEVGANVIMI SQASSEHSIC FAVPEKEVAA VSAALHVRFR EALAAGRLSK VEVIHDCSIL AAVGLRMAST
501: PGVSAILFDA LAKANINVRA IAQGCSEYNI TVVLKQEDCV RALRAAHSRF FLSKTTLAIG VIGPGLIGAT LLNQLRDQVA VLKENMNIDV RVIGITGAST
601: MLLSDTGVDL TRWKEEMQKE AKPADLANFV RHLSEDHVFP NKVLVDCTAD TNVASHYYDW LKKGIHVITP NKKANSGPLD RYLKLRTLQR ASYTHYFYEA
701: TVGAGLPIIS TLRGLLETGD KILRIEGIFS GTLSYIFNNF EGTRSFSDVV AEAKEAGYTE PDPRDDLSGT DVARKVIILA RESGLRLELS DIPVESLVPE
801: ALKSCSSPNE FMQKLPSFDQ DWARQRHEAE AAGEVLRYVG VVDVLNGKGR VELQRYKRDH PFAQLSGSDN IIAFTTSRYK EQPLIVRGPG AGAEVTAGGV
901: FCDILRLASY LGAPS

Best Arabidopsis Sequence Match ( AT4G19710.2 )
(BLAST)

001: MATLKPSFTV SPPNSNPIRF GSFPPQCFLR VPKPRRLILP RFRKTTGGGG GLIRCELPDF HLSATATTVS GVSTVNLVDQ VQIPKGEMWS VHKFGGTCVG
101: NSQRIRNVAE VIINDNSERK LVVVSAMSKV TDMMYDLIRK AQSRDDSYLS ALEAVLEKHR LTARDLLDGD DLASFLSHLH NDISNLKAML RAIYIAGHAS
201: ESFSDFVAGH GELWSAQMLS YVVRKTGLEC KWMDTRDVLI VNPTSSNQVD PDFGESEKRL DKWFSLNPSK IIIATGFIAS TPQNIPTTLK RDGSDFSAAI
301: MGALLRARQV TIWTDVDGVY SADPRKVNEA VILQTLSYQE AWEMSYFGAN VLHPRTIIPV MRYNIPIVIR NIFNLSAPGT IICQPPEDDY DLKLTTPVKG
401: FATIDNLALI NVEGTGMAGV PGTASDIFGC VKDVGANVIM ISQASSEHSV CFAVPEKEVN AVSEALRSRF SEALQAGRLS QIEVIPNCSI LAAVGQKMAS
501: TPGVSCTLFS ALAKANINVR AISQGCSEYN VTVVIKREDS VKALRAVHSR FFLSRTTLAM GIVGPGLIGA TLLDQLRDQA AVLKQEFNID LRVLGITGSK
601: KMLLSDIGID LSRWRELLNE KGTEADLDKF TQQVHGNHFI PNSVVVDCTA DSAIASRYYD WLRKGIHVIT PNKKANSGPL DQYLKLRDLQ RKSYTHYFYE
701: ATVGAGLPII STLRGLLETG DKILRIEGIC SGTLSYLFNN FVGDRSFSEV VTEAKNAGFT EPDPRDDLSG TDVARKVIIL ARESGLKLDL ADLPIRSLVP
801: EPLKGCTSVE EFMEKLPQYD GDLAKERLDA ENSGEVLRYV GVVDAVNQKG TVELRRYKKE HPFAQLAGSD NIIAFTTTRY KDHPLIVRGP GAGAQVTAGG
901: IFSDILRLAS YLGAPS

Arabidopsis Description

AKHSDH2Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O81852]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.