Factsheet for Zm00001d005535_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019988_P001	Maize	plastid	71.11	83.21
EER96488	Sorghum	plastid	70.74	82.77
Os09t0294000-01	Rice	plasma membrane	67.47	79.13
TraesCS5A01G177400.1	Wheat	golgi	65.89	77.27
TraesCS5D01G181600.4	Wheat	plastid	65.7	77.05
TraesCS5B01G174600.1	Wheat	plastid	65.61	76.94
HORVU5Hr1G053950.1	Barley	plastid	65.89	75.61
Zm00001d050133_P001	Maize	plastid	25.91	73.55
GSMUA_Achr5P01800_001	Banana	vacuole	48.46	70.84
Zm00001d050134_P001	Maize	plastid	40.17	69.52
GSMUA_Achr4P28160_001	Banana	plastid	58.43	67.35
VIT_18s0001g03660.t01	Wine grape	mitochondrion, plastid	53.4	65.79
KRH58834	Soybean	endoplasmic reticulum, plastid	54.24	63.54
KRH42738	Soybean	nucleus, plastid	54.05	63.32
AT4G19710.2	Thale cress	plastid	53.87	63.1
CDY59140	Canola	plastid	53.77	62.79
Bra013425.1-P	Field mustard	plastid	53.96	62.73
CDY02370	Canola	plastid	53.12	62.71
Bra023169.1-P	Field mustard	plastid	53.03	62.6
CDY51915	Canola	plastid	53.68	62.47
CDY51625	Canola	plastid	52.84	62.24
AT1G31230.1	Thale cress	plastid	52.66	62.02
Solyc11g040390.1.1	Tomato	plastid	47.06	61.66
Solyc06g064550.2.1	Tomato	plastid	52.0	60.72
PGSC0003DMT400083218	Potato	plastid	51.82	60.3
KRG97357	Soybean	cytoskeleton, cytosol, peroxisome	35.51	59.16
GSMUA_Achr5P01810_001	Banana	plastid	10.81	45.85
Zm00001d023278_P002	Maize	extracellular, vacuole	10.72	29.56
Zm00001d018301_P001	Maize	extracellular, plasma membrane	5.78	25.31
Zm00001d037282_P001	Maize	plastid	3.73	24.69
Zm00001d034851_P001	Maize	plastid	9.04	22.77
Zm00001d005151_P004	Maize	plastid	11.93	22.65
Zm00001d042264_P006	Maize	mitochondrion, plastid	11.65	21.59
Zm00001d029179_P001	Maize	extracellular	0.93	15.87
Zm00001d035282_P001	Maize	mitochondrion	4.1	14.47

Protein Annotations

KEGG:00260+1.1.1.3	KEGG:00260+2.7.2.4	KEGG:00261+2.7.2.4	KEGG:00270+1.1.1.3	KEGG:00270+2.7.2.4	KEGG:00300+1.1.1.3
KEGG:00300+2.7.2.4	Gene3D:3.30.2130.10	Gene3D:3.30.360.10	Gene3D:3.40.1160.10	MapMan:4.1.2.2.4	UniProt:A0A1D6ENN1
InterPro:ACT_dom	InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase	InterPro:Asp/hSer_DH_NAD-bd	InterPro:Asp_kinase	InterPro:Aspartate_kinase_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004072	GO:GO:0005488	GO:GO:0006520
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016491	GO:GO:0016740	GO:GO:0050661	GO:GO:0055114	InterPro:HDH_CS
InterPro:HDH_cat	InterPro:IPR002912	InterPro:IPR036393	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM21402.1	PFAM:PF00696
PFAM:PF00742	PFAM:PF03447	ScanProsite:PS00324	ScanProsite:PS01042	PFscan:PS51671	PANTHER:PTHR43070
PANTHER:PTHR43070:SF2	SUPFAM:SSF51735	SUPFAM:SSF53633	SUPFAM:SSF55021	SUPFAM:SSF55347	TIGRFAMs:TIGR00657
UniParc:UPI000843B44B	EnsemblPlantsGene:Zm00001d005535	EnsemblPlants:Zm00001d005535_P002	EnsemblPlants:Zm00001d005535_T002	SEG:seg	:

Description

aspartate kinase homoserine dehydrogenase2Bifunctional aspartokinase/homoserine dehydrogenase 2%2C chloroplastic Aspartokinase Homoserine dehydrogenase

Coordinates

chr2:-:177655850..177675449

Molecular Weight (calculated)

117940.0 Da

IEP (calculated)

8.394

GRAVY (calculated)

-0.298

Length

1073 amino acids

Sequence
(BLAST)

0001: MNPQIWVGAN ESESRVEGIG PVLCDYIPSI ICHTFNHFMH YFNVKLIYRE AVLQCWKYEL SQDHYLGGPL RIGQSQGSLH RHRSTNFLRP AAAAISVEQD
0101: EVNTYLPKGD MWSVHKFGGT CMGTPKRIQC VANIVLGDSS ERKLIIVSAM SKVTDMMYNL VQKAQSRDDS YAIALAEVFE KHMTAAKDLL DGEDLARFLS
0201: QLHSDVSNLR AMLRAIYIAG HATESFSDFV VGHGELWSAQ MLSYAIKKSG APCSWMDTRE VLVVTPSGCN QVDPDYLECE KRLQKWFSRQ PAEIIVATGF
0301: IASTAGNIPT TLKRDGSDFS AAIVGSLVRA RQVTIWTDVD GVFSADPRKV SEAVILSTLS YQEAWEMSYF GANVLHPRTI IPVMKDNIPI VIRNMFNLSA
0401: PGTMICKQPA NENGEGGARR HHGPQLAGEG HARTAAEAVE RAREAAAASR KAGKATEGDG GGLTTARQVH RAAPAQGATR TRAAMGGPPR PRCQGAAPRP
0501: GSHARTKPRQ EQASSEHSVC FAVPEKEVAV VSAELHDRFR EALAAGRLSK VEVINGCSIL AAVGLRMAST PGVSAILFDA LAKANINVRA IAQGCSEYNI
0601: TVVLKQQDCV RALRAAHSRF FLSKTTLAVG IIGPGLIGGA LLNQLKNQVL EQQAAVGGEE GGKHNRPPRW IKSREVRTDL YFLSSFNKNE GWMAQNTELY
0701: RLSRSEVCTD TILQIRHHRR LRRNGQHQVY CRVHLLGAGN TNNASDDGRA RMVGDRDNID ERRAVHDHER DNLARTFPQR FSPAHLMGID LTQWKQLLQK
0801: EAEPADIGSF VHHLSDNHVF PNKVLVDCTA DTSVASHYYD WLKKGIHVIT PNKKANSGPL DQYLKLRTMQ RASYTHYFYE ATVGAGLPII STLRGLLETG
0901: TRAFSDVVAE AREAGYTEPD PRDDLSGTDV ARKVVVLARE SGLRLELSDI PVKSLVPETL ASCSSADEFM QKLPSFDEDW ARQRSDAEAA GEVLRYVGAL
1001: DAVNRSGQVE LRRYRRDHPF AQLSGSDNII AFTTSRYKEQ PLIVRGPGAG AEVTAGGVFC DILRLASYLG APS

Best Arabidopsis Sequence Match ( AT1G31230.1 )
(BLAST)

001: MPVVSLAKVV TSPAVAGDLA VRVPFIYGKR LVSNRVSFGK LRRRSCIGQC VRSELQSPRV LGSVTDLALD NSVENGHLPK GDSWAVHKFG GTCVGNSERI
101: KDVAAVVVKD DSERKLVVVS AMSKVTDMMY DLIHRAESRD DSYLSALSGV LEKHRATAVD LLDGDELSSF LARLNDDINN LKAMLRAIYI AGHATESFSD
201: FVVGHGELWS AQMLAAVVRK SGLDCTWMDA RDVLVVIPTS SNQVDPDFVE SEKRLEKWFT QNSAKIIIAT GFIASTPQNI PTTLKRDGSD FSAAIMSALF
301: RSHQLTIWTD VDGVYSADPR KVSEAVVLKT LSYQEAWEMS YFGANVLHPR TIIPVMKYDI PIVIRNIFNL SAPGTMICRQ IDDEDGFKLD APVKGFATID
401: NLALVNVEGT GMAGVPGTAS AIFSAVKEVG ANVIMISQAS SEHSVCFAVP EKEVKAVSEA LNSRFRQALA GGRLSQIEII PNCSILAAVG QKMASTPGVS
501: ATFFNALAKA NINIRAIAQG CSEFNITVVV KREDCIRALR AVHSRFYLSR TTLAVGIIGP GLIGGTLLDQ IRDQAAVLKE EFKIDLRVIG ITGSSKMLMS
601: ESGIDLSRWR ELMKEEGEKA DMEKFTQYVK GNHFIPNSVM VDCTADADIA SCYYDWLLRG IHVVTPNKKA NSGPLDQYLK IRDLQRKSYT HYFYEATVGA
701: GLPIISTLRG LLETGDKILR IEGIFSGTLS YLFNNFVGTR SFSEVVAEAK QAGFTEPDPR DDLSGTDVAR KVTILARESG LKLDLEGLPV QNLVPKPLQA
801: CASAEEFMEK LPQFDEELSK QREEAEAAGE VLRYVGVVDA VEKKGTVELK RYKKDHPFAQ LSGADNIIAF TTKRYKEQPL IVRGPGAGAQ VTAGGIFSDI
901: LRLAFYLGAP S

Arabidopsis Description

AKHSDH1Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SA18]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.