Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- nucleus 1
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr8P34050_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G13280.1 | GSMUA_Achr8P34050_001 | AT5G60340.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P09140_001 | Banana | cytosol | 69.92 | 19.1 |
| Os03t0850400-01 | Rice | cytosol, mitochondrion, plastid | 74.44 | 18.44 |
| TraesCS4A01G337800.1 | Wheat | plastid | 76.69 | 18.31 |
| TraesCS5B01G547400.1 | Wheat | plastid | 76.69 | 18.25 |
| HORVU5Hr1G121250.1 | Barley | plastid | 76.69 | 18.18 |
| TraesCS5D01G487000.2 | Wheat | plastid | 76.69 | 18.15 |
| TraesCS5D01G534600.1 | Wheat | plastid | 76.69 | 18.02 |
| HORVU5Hr1G121700.2 | Barley | cytosol | 38.35 | 17.47 |
| EER93093 | Sorghum | plastid | 72.18 | 16.96 |
| KXG34945 | Sorghum | mitochondrion, plastid | 70.68 | 16.73 |
| Os07t0300900-02 | Rice | plastid | 72.18 | 16.7 |
| Zm00001d005151_P004 | Maize | plastid | 70.68 | 16.64 |
| VIT_01s0244g00140.t01 | Wine grape | plastid | 70.68 | 16.4 |
| Solyc01g005240.2.1 | Tomato | plastid | 68.42 | 16.11 |
| KRH70062 | Soybean | plastid | 67.67 | 16.01 |
| CDX78557 | Canola | plastid | 63.91 | 15.83 |
| Bra006235.1-P | Field mustard | plastid | 63.91 | 15.83 |
| AT3G02020.1 | Thale cress | plastid | 66.17 | 15.74 |
| KRH08407 | Soybean | plastid | 66.17 | 15.58 |
| CDX70538 | Canola | plastid | 63.91 | 15.57 |
| PGSC0003DMT400058635 | Potato | cytosol | 67.67 | 15.46 |
| Bra008840.1-P | Field mustard | plastid | 63.91 | 15.43 |
| KRH06839 | Soybean | plastid | 64.66 | 15.33 |
| CDY09781 | Canola | plastid | 63.16 | 15.27 |
| AT5G14060.1 | Thale cress | plastid | 62.41 | 15.26 |
| CDX69652 | Canola | plastid | 63.16 | 15.24 |
| Bra023401.1-P | Field mustard | plastid | 63.16 | 15.16 |
| CDX85659 | Canola | plastid | 63.16 | 15.16 |
| CDX91135 | Canola | plastid | 62.41 | 14.96 |
| HORVU5Hr1G121650.2 | Barley | cytosol | 44.36 | 14.82 |
| KRG94687 | Soybean | plastid | 62.41 | 14.77 |
| AT5G13280.1 | Thale cress | plastid | 62.41 | 14.59 |
| CDY06621 | Canola | plastid | 63.16 | 14.58 |
| CDY20797 | Canola | plastid | 62.41 | 14.36 |
| Bra035544.1-P | Field mustard | plastid | 62.41 | 14.36 |
| VIT_14s0068g01190.t01 | Wine grape | cytosol | 69.92 | 14.22 |
| CDX70539 | Canola | mitochondrion | 5.26 | 7.53 |
| TraesCS7B01G461700.1 | Wheat | nucleus | 47.37 | 6.19 |
| TraesCS5B01G550800.1 | Wheat | nucleus | 36.09 | 4.66 |
| GSMUA_AchrUn_... | Banana | plastid | 8.27 | 4.37 |
| Solyc11g040380.1.1 | Tomato | plastid | 3.76 | 4.35 |
| GSMUA_Achr5P01800_001 | Banana | vacuole | 23.31 | 4.22 |
| GSMUA_Achr4P28160_001 | Banana | plastid | 23.31 | 3.33 |
| Zm00001d034851_P001 | Maize | plastid | 9.02 | 2.82 |
| GSMUA_AchrUn_... | Banana | plastid | 7.52 | 2.33 |
| GSMUA_Achr8P09360_001 | Banana | plastid | 6.77 | 1.0 |
| GSMUA_Achr5P01810_001 | Banana | plastid | 1.5 | 0.79 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP23500_001 | EnsemblPlants:GSMUA_AchrUn_randomT23500_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG23500_001 | Gene3D:3.30.2130.10 | InterPro:ACT_dom | InterPro:IPR002912 |
| PANTHER:PTHR21499 | PANTHER:PTHR21499:SF40 | PFscan:PS51671 | SUPFAM:SSF55021 | UniParc:UPI000296A77B | UniProt:M0UBQ8 |
| MapMan:35.1 | : | : | : | : | : |
Description
aspartokinase, chloroplast precursor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG23500_001]
Coordinates
chrchrUn_random:-:115131654..115133139
Molecular Weight (calculated)
14771.9 Da
IEP (calculated)
5.153
GRAVY (calculated)
0.244
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDAQELEKF TFIPVHVFYL FLELDHVVEE LEKIAVVHLL QHRSIISLVG NVQRSSLILE KAFNVLRKNG VNVQMISQGA SKVNISLIVN DDEAKQCVKA
101: LHSAFFENGF LSEVGEAEFS GNGTTIPSNV SVM
101: LHSAFFENGF LSEVGEAEFS GNGTTIPSNV SVM
001: MAASMQFYGV KTPELALNSK RIEFSSKGLN FSALVSSARV FSRNVDRSCK NIALRVTCEA GRVELLERKA SETFKLNKTE KKLTCVMKFG GSSVASAERM
101: IQVAKLILSF PDEKPVVVLS AMAKTTNKLL MAGEKAVCCG VTNVDTIEEL SYIKELHIRT AHELGVETAV IAEHLEGLEQ LLKGVAMMKE LTLRSRDYLV
201: SFGECMSTRL FAAYLNKIGH KARQYDAFEI GIITTDDFTN ADILEATYPA VSKKLLGDWS KENALPVVTG FLGKGWRSCA VTTLGRGGSD LTATTIGKAL
301: GLREIQVWKD VDGVLTCDPN IYCGAQPVPH LTFDEAAELA YFGAQVLHPL SMRPAREGNI PVRVKNSYNP TAPGTVITRS RDMSKAVLTS IVLKRNVTML
401: DITSTRMLGQ YGFLAKVFST FEKLGISVDV VATSEVSISL TLDPSKFCSR ELIQHELDQV VEELEKIAVV NLLRHRSIIS LIGNVQRSSF ILEKGFRVLR
501: TNGINVQMIS QGASKVNISL IVNDDEAEHC VKALHSAFFE TDTCEAVSEC PTGYIAASS
101: IQVAKLILSF PDEKPVVVLS AMAKTTNKLL MAGEKAVCCG VTNVDTIEEL SYIKELHIRT AHELGVETAV IAEHLEGLEQ LLKGVAMMKE LTLRSRDYLV
201: SFGECMSTRL FAAYLNKIGH KARQYDAFEI GIITTDDFTN ADILEATYPA VSKKLLGDWS KENALPVVTG FLGKGWRSCA VTTLGRGGSD LTATTIGKAL
301: GLREIQVWKD VDGVLTCDPN IYCGAQPVPH LTFDEAAELA YFGAQVLHPL SMRPAREGNI PVRVKNSYNP TAPGTVITRS RDMSKAVLTS IVLKRNVTML
401: DITSTRMLGQ YGFLAKVFST FEKLGISVDV VATSEVSISL TLDPSKFCSR ELIQHELDQV VEELEKIAVV NLLRHRSIIS LIGNVQRSSF ILEKGFRVLR
501: TNGINVQMIS QGASKVNISL IVNDDEAEHC VKALHSAFFE TDTCEAVSEC PTGYIAASS
Arabidopsis Description
AK3Aspartokinase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S702]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.