CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
nucleus 1
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	plastid
Plant-mPloc:	plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU88892

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13280.1	OQU88892	AT5G60340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034851_P001	Maize	plastid	69.79	92.72
HORVU5Hr1G121250.1	Barley	plastid	86.04	86.81
TraesCS4A01G337800.1	Wheat	plastid	85.34	86.71
TraesCS5B01G547400.1	Wheat	plastid	85.51	86.58
TraesCS5D01G487000.2	Wheat	plastid	85.87	86.48
Os03t0850400-01	Rice	cytosol, mitochondrion, plastid	80.57	84.92
TraesCS5D01G534600.1	Wheat	plastid	84.63	84.63
KXG34945	Sorghum	mitochondrion, plastid	75.62	76.16
KRH70062	Soybean	plastid	72.61	73.13
VIT_01s0244g00140.t01	Wine grape	plastid	73.85	72.95
KRH08407	Soybean	plastid	72.08	72.21
GSMUA_AchrUn_...	Banana	vacuole	16.96	72.18
Bra006235.1-P	Field mustard	plastid	68.2	71.88
CDX78557	Canola	plastid	68.2	71.88
KRH06839	Soybean	plastid	70.85	71.48
KRG94687	Soybean	plastid	70.85	71.35
Solyc01g005240.2.1	Tomato	plastid	71.02	71.15
AT5G14060.1	Thale cress	plastid	68.37	71.14
CDX70538	Canola	plastid	68.02	70.51
AT5G13280.1	Thale cress	plastid	69.79	69.42
OQU88150	Sorghum	mitochondrion	67.84	69.19
AT3G02020.1	Thale cress	plastid	68.2	69.05
CDY09781	Canola	plastid	66.43	68.36
Bra008840.1-P	Field mustard	plastid	66.25	68.06
CDX69652	Canola	plastid	66.25	68.06
CDX85659	Canola	plastid	66.43	67.87
Bra023401.1-P	Field mustard	plastid	66.43	67.87
CDX91135	Canola	plastid	66.08	67.39
PGSC0003DMT400058635	Potato	cytosol	66.78	64.95
CDY06621	Canola	plastid	65.37	64.24
CDY20797	Canola	plastid	65.37	64.01
Bra035544.1-P	Field mustard	plastid	65.02	63.67
VIT_14s0068g01190.t01	Wine grape	cytosol	72.44	62.69
CDX70539	Canola	mitochondrion	9.72	59.14
HORVU5Hr1G121700.2	Barley	cytosol	23.14	44.86
HORVU5Hr1G121650.2	Barley	cytosol	30.04	42.71
TraesCS7B01G461700.1	Wheat	nucleus	50.71	28.22
TraesCS5B01G550800.1	Wheat	nucleus	44.7	24.59
EER96488	Sorghum	plastid	25.44	15.7
Solyc11g040380.1.1	Tomato	plastid	1.77	8.7
EES15586	Sorghum	extracellular	2.3	4.15

Protein Annotations

KEGG:00260+2.7.2.4	KEGG:00261+2.7.2.4	KEGG:00270+2.7.2.4	KEGG:00300+2.7.2.4	Gene3D:1.20.120.1320	Gene3D:3.30.70.260
Gene3D:3.40.1160.10	MapMan:4.1.2.2.1	EntrezGene:8060870	InterPro:ACT_dom	InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase
InterPro:Asp_kinase	InterPro:Aspartate_kinase_CS	UniProt:C5WSV9	EnsemblPlants:EER93093	ProteinID:EER93093	ProteinID:EER93093.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004072	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009088
GO:GO:0009089	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	InterPro:IPR002912	InterPro:IPR036393	PFAM:PF00696	ScanProsite:PS00324	PFscan:PS51671
PANTHER:PTHR21499	PANTHER:PTHR21499:SF40	MetaCyc:PWY-2941	MetaCyc:PWY-2942	MetaCyc:PWY-5097	MetaCyc:PWY-6559
MetaCyc:PWY-6562	MetaCyc:PWY-7153	EnsemblPlantsGene:SORBI_3001G011700	SUPFAM:SSF53633	SUPFAM:SSF55021	unigene:Sbi.9664
TIGRFAMs:TIGR00657	UniParc:UPI0001A82821	RefSeq:XP_002466095.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:1005669..1010890

Molecular Weight (calculated)

61146.6 Da

IEP (calculated)

6.522

GRAVY (calculated)

0.044

Length

566 amino acids

Sequence
(BLAST)

001: MAEALRFPGV VAGESLDAPI AASKLGRERH SVSASARPGA QCWRRRKGLA VSCQTGAAPA VLRTEETTAA AAAGSNAQAE FTVVMKFGGS SLASAERMRE
101: VADLILSFPD ETPVVVLSAM GKTTNNLLLA GEKAVSCGAP KASEIPELAV IKDLHLRTVD ELGLDRSIVS GLLDELEQLL KGVAMMKELT LRTRDYLVSF
201: GECMSTRIFA AYLNKLGKKA RQYDAFDIGF ITTDDFTNAD ILEVTYPTVA KRLHRDWMDN PAIPIVTGFL GKGCKSCAVT TLGRGGSDLT ATTIGKALGL
301: REIQVWKDVD GVLTCDPNIY ANAIPVPYLT FDEAAELAYF GAQVLHPQSM RPARDGDIPV RVKNSYNRHA PGTVITKSRD MSKSILTSIV LKSNVTMLDI
401: VSTRMLGQYG FLAKVFSIFE DLGISVDVVA TSEVSISLTL DPSKLWSREL IQQELDHVVE ELEKFSVVHL LQRRSIISLI GNVQRSSLVL EKAFNVLRRN
501: GVNVQMISQG ASKVNISLVV NDSEAKQCVQ ALHSAFFENG FLSEVEGADV PQNGSSLNSN GAIYAN

Best Arabidopsis Sequence Match ( AT5G13280.1 )
(BLAST)

001: MAATRVRCCH SNAAFTRLPL TRHRNSPTLP ISLNRVDFPT LKKLSLPIGD GSSIRKVSGS GSRNIVRAVL EEKKTEAITE VDEKGITCVM KFGGSSVASA
101: ERMKEVADLI LTFPEESPVI VLSAMGKTTN NLLLAGEKAV SCGVSNASEI EELSIIKELH IRTVKELNID PSVILTYLEE LEQLLKGIAM MKELTLRTRD
201: YLVSFGECLS TRIFAAYLNT IGVKARQYDA FEIGFITTDD FTNGDILEAT YPAVAKRLYD DWMHDPAVPI VTGFLGKGWK TGAVTTLGRG GSDLTATTIG
301: KALGLKEIQV WKDVDGVLTC DPTIYKRATP VPYLTFDEAA ELAYFGAQVL HPQSMRPARE GEIPVRVKNS YNPKAPGTII TKTRDMTKSI LTSIVLKRNV
401: TMLDIASTRM LGQVGFLAKV FSIFEELGIS VDVVATSEVS ISLTLDPSKL WSRELIQQEL DHVVEELEKI AVVNLLKGRA IISLIGNVQH SSLILERAFH
501: VLYTKGVNVQ MISQGASKVN ISFIVNEAEA EGCVQALHKS FFESGDLSEL LIQPRLGNGS PVRTLQVEN

Arabidopsis Description

AK1AK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.