CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX71036
CDX80174
CDX88754
CDY31552

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13280.1	CDX71036	AT5G60340.1	21798944
AT5G13280.1	CDX80174	AT5G60340.1	21798944
AT5G13280.1	CDX88754	AT5G60340.1	21798944
AT5G13280.1	CDY31552	AT5G60340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85659	Canola	plastid	96.58	96.75
CDX69652	Canola	plastid	90.63	91.29
CDY09781	Canola	plastid	90.45	91.27
AT5G13280.1	Thale cress	plastid	86.49	84.36
GSMUA_Achr8P09140_001	Banana	cytosol	63.78	72.69
GSMUA_AchrUn_...	Banana	plastid	54.23	70.0
Zm00001d029179_P001	Maize	extracellular	7.93	69.84
VIT_01s0244g00140.t01	Wine grape	plastid	71.53	69.28
Zm00001d018301_P001	Maize	extracellular, plasma membrane	30.09	68.16
Os03t0850400-01	Rice	cytosol, mitochondrion, plastid	65.95	68.16
TraesCS4A01G337800.1	Wheat	plastid	68.11	67.86
Solyc01g005240.2.1	Tomato	plastid	68.83	67.61
TraesCS5B01G547400.1	Wheat	plastid	67.93	67.44
CDX78557	Canola	plastid	65.23	67.41
HORVU5Hr1G121250.1	Barley	plastid	68.11	67.38
TraesCS5D01G487000.2	Wheat	plastid	67.75	66.9
TraesCS5D01G534600.1	Wheat	plastid	67.93	66.61
CDX70538	Canola	plastid	65.23	66.3
EER93093	Sorghum	plastid	67.39	66.08
Zm00001d037282_P001	Maize	plastid	19.28	66.05
Zm00001d034851_P001	Maize	plastid	50.63	65.96
PGSC0003DMT400058635	Potato	cytosol	68.47	65.29
Os07t0300900-02	Rice	plastid	67.39	65.04
KXG34945	Sorghum	mitochondrion, plastid	65.23	64.41
OQU88150	Sorghum	mitochondrion	64.32	64.32
Zm00001d005151_P004	Maize	plastid	65.23	64.07
Os01t0927900-01	Rice	mitochondrion	65.59	63.86
TraesCS3B01G475900.2	Wheat	plastid	63.96	63.06
TraesCS3D01G434800.1	Wheat	plastid	63.78	62.65
GSMUA_AchrUn_...	Banana	vacuole	14.96	62.41
TraesCS3A01G442100.2	Wheat	plastid	63.6	62.26
HORVU3Hr1G096500.10	Barley	plastid	64.5	61.62
Zm00001d042264_P006	Maize	mitochondrion, plastid	63.78	61.14
CDY20797	Canola	plastid	63.6	61.07
CDY06621	Canola	plastid	63.24	60.94
CDX70539	Canola	mitochondrion	9.73	58.06
Zm00001d035282_P001	Maize	mitochondrion	24.14	44.08
HORVU5Hr1G121700.2	Barley	cytosol	20.36	38.7
GSMUA_AchrUn_...	Banana	plastid	17.48	38.49
HORVU5Hr1G121650.2	Barley	cytosol	27.39	38.19
TraesCS7B01G461700.1	Wheat	nucleus	44.5	24.29
TraesCS5B01G550800.1	Wheat	nucleus	40.18	21.67
CDY59140	Canola	plastid	24.86	15.02
CDY51915	Canola	plastid	24.86	14.97
CDY02370	Canola	plastid	24.32	14.85
CDY51625	Canola	plastid	23.96	14.6
CDY16591	Canola	mitochondrion	2.7	3.97
CDX92414	Canola	mitochondrion	2.7	3.86
CDY51912	Canola	cytosol	1.26	3.32

Protein Annotations

KEGG:00260+2.7.2.4	KEGG:00261+2.7.2.4	KEGG:00270+2.7.2.4	KEGG:00300+2.7.2.4	Gene3D:1.20.120.1320	Gene3D:3.30.70.260
Gene3D:3.40.1160.10	MapMan:4.1.2.2.1	GO:A0A078DPB0	InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase	InterPro:Asp_kinase
InterPro:Aspartate_kinase_CS	EnsemblPlants:CDX91135	ProteinID:CDX91135	ProteinID:CDX91135.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0004072	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00151923001	InterPro:IPR036393	PFAM:PF00696
ScanProsite:PS00324	PANTHER:PTHR21499	PANTHER:PTHR21499:SF40	MetaCyc:PWY-2941	MetaCyc:PWY-2942	MetaCyc:PWY-5097
MetaCyc:PWY-6559	MetaCyc:PWY-6562	MetaCyc:PWY-7153	SUPFAM:SSF53633	SUPFAM:SSF55021	TIGRFAMs:TIGR00657
UniPathway:UPA00034	UniPathway:UPA00050	UniPathway:UPA00051	UniParc:UPI0004EDD0E9	:	:

Description

BnaC02g04620D

Coordinates

chrLK031865:-:921208..924508

Molecular Weight (calculated)

60526.0 Da

IEP (calculated)

6.738

GRAVY (calculated)

-0.037

Length

555 amino acids

Sequence
(BLAST)

001: MAAAARVQCH NNTSFTGSPL PRRHHNSSTL HASPNRVNFT PLKWIGDGSS SCTRTVSGRP LKGGGTTTAR AAFEEEKKTD AVNEVAEEKR RFTCVMKFGG
101: SSVATAERMR EVADLVLTFP EESPVIVLSA MGKTTNNLLL AGEKAVSCGV SNASEIEELS VIKELHLRTV KELEIDPSVV SSFLEELEQL LKGIAMMKEL
201: TLRTRDYLVS FGECLSTRIF AAYLNKIGVK ARQYDAFEIG FITTDDFTNG DILEATYPAV AKRLYDDWMH DPAVPVVTGF LGKGWKTCAV TTLGRGGSDL
301: TATTIGKALG LQEIQVWKDV DGVLTCDPTI YKRATPVPYL TFDEAAELAY FGAQVLHPQS MRPAREGGIP VRVKNSYNPK APGTIITKTR DMTKTVLTSI
401: VLKRNVTMLD IASTRMLGQV GFLAKVFSIF EDLEISVDVV ATSEELDHVV EELKKIAVVN LAKGRAIISL IGNVQHSSLI LERAFHVLWT KGINVQMISQ
501: GASKVNISLI VNDAEAEGCV EALHKSFFES GDLSELLIQP RLGNGSPVRA MQVEN

Best Arabidopsis Sequence Match ( AT5G13280.1 )
(BLAST)

001: MAATRVRCCH SNAAFTRLPL TRHRNSPTLP ISLNRVDFPT LKKLSLPIGD GSSIRKVSGS GSRNIVRAVL EEKKTEAITE VDEKGITCVM KFGGSSVASA
101: ERMKEVADLI LTFPEESPVI VLSAMGKTTN NLLLAGEKAV SCGVSNASEI EELSIIKELH IRTVKELNID PSVILTYLEE LEQLLKGIAM MKELTLRTRD
201: YLVSFGECLS TRIFAAYLNT IGVKARQYDA FEIGFITTDD FTNGDILEAT YPAVAKRLYD DWMHDPAVPI VTGFLGKGWK TGAVTTLGRG GSDLTATTIG
301: KALGLKEIQV WKDVDGVLTC DPTIYKRATP VPYLTFDEAA ELAYFGAQVL HPQSMRPARE GEIPVRVKNS YNPKAPGTII TKTRDMTKSI LTSIVLKRNV
401: TMLDIASTRM LGQVGFLAKV FSIFEELGIS VDVVATSEVS ISLTLDPSKL WSRELIQQEL DHVVEELEKI AVVNLLKGRA IISLIGNVQH SSLILERAFH
501: VLYTKGVNVQ MISQGASKVN ISFIVNEAEA EGCVQALHKS FFESGDLSEL LIQPRLGNGS PVRTLQVEN

Arabidopsis Description

AK1AK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.