Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31552 | Canola | plastid | 94.22 | 94.67 |
| Bra002487.1-P | Field mustard | cytosol | 40.48 | 94.38 |
| CDX71036 | Canola | cytosol | 35.42 | 83.05 |
| CDX88754 | Canola | cytosol, mitochondrion, nucleus, plastid | 35.42 | 83.05 |
| AT5G60340.1 | Thale cress | mitochondrion | 30.36 | 70.79 |
| Solyc11g072410.1.1 | Tomato | mitochondrion | 30.12 | 70.62 |
| VIT_06s0004g03280.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 29.64 | 70.29 |
| GSMUA_Achr8P34050_001 | Banana | mitochondrion | 29.88 | 70.06 |
| PGSC0003DMT400070488 | Potato | mitochondrion | 29.64 | 69.49 |
| Os07t0412400-01 | Rice | mitochondrion | 29.16 | 67.22 |
| Zm00001d019481_P001 | Maize | mitochondrion | 28.92 | 67.04 |
| KRH70217 | Soybean | nucleus | 28.92 | 67.04 |
| TraesCS6A01G074100.1 | Wheat | mitochondrion | 28.19 | 65.73 |
| TraesCSU01G123400.1 | Wheat | mitochondrion | 28.19 | 65.73 |
| KRH08572 | Soybean | nucleus | 27.95 | 64.8 |
| TraesCSU01G086500.1 | Wheat | mitochondrion, plastid | 27.71 | 64.61 |
| KRH34487 | Soybean | cytosol | 19.52 | 63.28 |
| PGSC0003DMT400019370 | Potato | mitochondrion | 25.06 | 56.83 |
| Solyc06g075310.2.1 | Tomato | cytosol | 18.07 | 56.39 |
| KRG92307 | Soybean | cytosol | 16.63 | 54.76 |
| OQU88892 | Sorghum | plastid | 29.64 | 52.12 |
| PGSC0003DMT400021286 | Potato | mitochondrion | 8.43 | 50.0 |
| PGSC0003DMT400089563 | Potato | cytosol | 10.12 | 44.68 |
| PGSC0003DMT400085557 | Potato | cytosol, mitochondrion | 10.12 | 40.0 |
| HORVU6Hr1G013200.1 | Barley | mitochondrion | 28.19 | 39.26 |
| PGSC0003DMT400013687 | Potato | cytosol | 6.51 | 21.77 |
Protein Annotations
| KEGG:00230+2.7.4.3 | KEGG:00730+2.7.4.3 | MapMan:17.1.3.2.1.16 | Gene3D:3.10.129.10 | Gene3D:3.40.50.300 | MapMan:5.1.5.6 |
| GO:A0A078CVX4 | InterPro:Adenyl_kinase_AK6 | EnsemblPlants:CDX80174 | ProteinID:CDX80174 | ProteinID:CDX80174.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004017 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016301 |
| GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00133096001 | InterPro:HotDog_dom_sf | HAMAP:MF_00039 | InterPro:MaoC_dom | InterPro:P-loop_NTPase |
| PFAM:PF01575 | PFAM:PF13238 | PANTHER:PTHR12595 | PANTHER:PTHR12595:SF0 | MetaCyc:PWY-7219 | SUPFAM:SSF52540 |
| SUPFAM:SSF54637 | UniParc:UPI0004EEAC80 | SEG:seg | : | : | : |
Description
BnaC09g35680D
Coordinates
chrLK031820:+:163910..167023
Molecular Weight (calculated)
46127.6 Da
IEP (calculated)
5.756
GRAVY (calculated)
-0.282
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEGANNGTR RPRPNLLITG TPGTGKSTTA SALAEATNFR YICVGDLVKE KNLHDGWDDQ FECHVINEDL VCDELEDVME GGGVIVDYHG CDFFPERWFD
101: RVVVLQTENS VLYDRLTKRG YSGTKLTNNI ECEIFQVLLE EARDSYQEEI VIALQSDTIE DISDNVASKA MLAQTFLPRN VLVSRCFSSV TSKTLKVGDI
201: LREARVHSSE DVKSYAEVSH DWNPLHFDQE LARKAGFENR LVHGMLVSSL FPRIISSHFP GAVYVSQNLH FRSPVYIGDE ILCLVQATAL RETKNKYIVR
301: FSTKCIKNHN ELVVLDGEAT AILPSLELRQ PSIGYNLMWV VRPPKSSKEN HHPTNVVTIS SSSPSSPLSS GQALKNGDAG EIEIRIVIPR SPNSTHLEIE
401: GRNNSKLLAN GSPVS
101: RVVVLQTENS VLYDRLTKRG YSGTKLTNNI ECEIFQVLLE EARDSYQEEI VIALQSDTIE DISDNVASKA MLAQTFLPRN VLVSRCFSSV TSKTLKVGDI
201: LREARVHSSE DVKSYAEVSH DWNPLHFDQE LARKAGFENR LVHGMLVSSL FPRIISSHFP GAVYVSQNLH FRSPVYIGDE ILCLVQATAL RETKNKYIVR
301: FSTKCIKNHN ELVVLDGEAT AILPSLELRQ PSIGYNLMWV VRPPKSSKEN HHPTNVVTIS SSSPSSPLSS GQALKNGDAG EIEIRIVIPR SPNSTHLEIE
401: GRNNSKLLAN GSPVS
001: MLAKTVFPRG LLVLRSFSSV ASKTLLKVGD VLRETRVFSS EDIKAYAEVS HDWNPLHFDP ESARKAGFEN RLVHGMLVSS MFPRIISAHF PGAVYVSQSL
101: HFRSPVYIGD EILGLVQAIA LRETKNKYIV KFSTKCFKNH NELVVIDGEA TAILPNLDML QKSPSE
101: HFRSPVYIGD EILGLVQAIA LRETKNKYIV KFSTKCFKNH NELVVIDGEA TAILPNLDML QKSPSE
Arabidopsis Description
Hydroxyacyl-thioester dehydratase type-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FJI2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.