Factsheet for PGSC0003DMT400019370

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400022864
PGSC0003DMT400023896
PGSC0003DMT400036790
PGSC0003DMT400054512
PGSC0003DMT400069203
PGSC0003DMT400072364
PGSC0003DMT400074101
PGSC0003DMT400078676

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G60340.1	PGSC0003DMT400023896	AT1G22920.1	21798944
AT5G60340.1	PGSC0003DMT400069203	AT1G22920.1	21798944
AT5G60340.1	PGSC0003DMT400078676	AT2G22680.1	21798944
AT5G60340.1	PGSC0003DMT400022864	AT2G36160.1	23121860
AT5G60340.1	PGSC0003DMT400054512	AT2G36160.1	23121860
AT5G60340.1	PGSC0003DMT400072364	AT2G36160.1	23121860
AT5G60340.1	PGSC0003DMT400036790	AT3G17860.1	21798944
AT5G60340.1	PGSC0003DMT400074101	AT3G17860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021286	Potato	mitochondrion	31.69	82.86
PGSC0003DMT400070488	Potato	mitochondrion	65.03	67.23
VIT_06s0004g03280.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	63.39	66.29
PGSC0003DMT400089563	Potato	cytosol	33.33	64.89
KRH70217	Soybean	nucleus	60.11	61.45
PGSC0003DMT400085557	Potato	cytosol, mitochondrion	34.97	60.95
KRH08572	Soybean	nucleus	59.56	60.89
Bra002487.1-P	Field mustard	cytosol	59.02	60.67
GSMUA_Achr8P34050_001	Banana	mitochondrion	57.38	59.32
TraesCSU01G123400.1	Wheat	mitochondrion	57.38	58.99
TraesCS6A01G074100.1	Wheat	mitochondrion	57.38	58.99
CDX71036	Canola	cytosol	56.83	58.76
TraesCSU01G086500.1	Wheat	mitochondrion, plastid	56.83	58.43
Zm00001d019481_P001	Maize	mitochondrion	56.83	58.1
CDX88754	Canola	cytosol, mitochondrion, nucleus, plastid	55.74	57.63
Bra006665.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	55.74	57.63
Os07t0412400-01	Rice	mitochondrion	55.74	56.67
KRH34487	Soybean	cytosol	38.8	55.47
AT5G60340.1	Thale cress	mitochondrion	51.91	53.37
KRG92307	Soybean	cytosol	34.97	50.79
OQU88892	Sorghum	plastid	57.38	44.49
HORVU6Hr1G013200.1	Barley	mitochondrion	57.92	35.57
PGSC0003DMT400013687	Potato	cytosol	21.86	32.26
CDY31552	Canola	plastid	56.83	25.18
CDX80174	Canola	plastid	56.83	25.06

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00730+2.7.4.3	EntrezGene:102602478	MapMan:17.1.3.2.1.16	Gene3D:3.40.50.300	InterPro:Adenyl_kinase_AK6
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004017	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0016787	GO:GO:0016887	GO:GO:0046939	GO:GO:0046940	UniProt:M1ABZ4	HAMAP:MF_00039
InterPro:P-loop_NTPase	PFAM:PF13238	EnsemblPlantsGene:PGSC0003DMG400007496	PGSC:PGSC0003DMG400007496	EnsemblPlants:PGSC0003DMT400019370	PANTHER:PTHR12595
PANTHER:PTHR12595:SF0	SUPFAM:SSF52540	UniParc:UPI000294C00C	SEG:seg	:	:

Description

Adenylate kinase isoenzyme 6 [Source:PGSC_GENE;Acc:PGSC0003DMG400007496]

Coordinates

chr6:+:55887915..55889190

Molecular Weight (calculated)

20695.1 Da

IEP (calculated)

4.116

GRAVY (calculated)

-0.283

Length

183 amino acids

Sequence
(BLAST)

001: MAQNSSCRKR PNILITGTPG TGKTTTAAAL AEVMELRHIN VGDFANEENL TNGWDDTFDS YYINEDLVCD ALENLMEEGG NIVDHHACDF FPECCFDRVV
101: VLQTDSSVLY DRFTKRLFDC PRGYSDHKLA SNTECQIFQV LLEEVKENYP DDIVIILRSD SLEDIAKNVE TLTSWISNWS PVV

Best Arabidopsis Sequence Match ( AT5G60340.1 )
(BLAST)

001: MARRNRGVTR RERPNLLITG TPGTGKSTTA SALAEATNLR YICIGDLVKE KEFYHGWDNE LECHFINEDS VIDELDDAMI EGGNIVDYHG CDFFPQRWFD
101: RVVVLRTENS VLYDRLTNRG YSGTKLSNNL QCEMYQVLLE EAHDSYDEEI VTELQSNTIE DISNNVSTLT DWINAWQP

Arabidopsis Description

AAK6Adenylate kinase isoenzyme 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FJI1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.