Factsheet for PGSC0003DMT400021286

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400022864
PGSC0003DMT400023896
PGSC0003DMT400036790
PGSC0003DMT400054512
PGSC0003DMT400069203
PGSC0003DMT400072364
PGSC0003DMT400074101
PGSC0003DMT400078676

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G60340.1	PGSC0003DMT400023896	AT1G22920.1	21798944
AT5G60340.1	PGSC0003DMT400069203	AT1G22920.1	21798944
AT5G60340.1	PGSC0003DMT400078676	AT2G22680.1	21798944
AT5G60340.1	PGSC0003DMT400022864	AT2G36160.1	23121860
AT5G60340.1	PGSC0003DMT400054512	AT2G36160.1	23121860
AT5G60340.1	PGSC0003DMT400072364	AT2G36160.1	23121860
AT5G60340.1	PGSC0003DMT400036790	AT3G17860.1	21798944
AT5G60340.1	PGSC0003DMT400074101	AT3G17860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400089563	Potato	cytosol	75.71	56.38
PGSC0003DMT400085557	Potato	cytosol, mitochondrion	80.0	53.33
Solyc06g075310.2.1	Tomato	cytosol	84.29	44.36
PGSC0003DMT400019370	Potato	mitochondrion	82.86	31.69
PGSC0003DMT400013687	Potato	cytosol	48.57	27.42
PGSC0003DMT400070488	Potato	mitochondrion	60.0	23.73
VIT_06s0004g03280.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	58.57	23.43
KRH08572	Soybean	nucleus	52.86	20.67
KRH70217	Soybean	nucleus	52.86	20.67
Bra002487.1-P	Field mustard	cytosol	48.57	19.1
CDX71036	Canola	cytosol	47.14	18.64
GSMUA_Achr8P34050_001	Banana	mitochondrion	47.14	18.64
Zm00001d019481_P001	Maize	mitochondrion	47.14	18.44
CDX88754	Canola	cytosol, mitochondrion, nucleus, plastid	45.71	18.08
Bra006665.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	45.71	18.08
Os07t0412400-01	Rice	mitochondrion	45.71	17.78
TraesCS6A01G074100.1	Wheat	mitochondrion	44.29	17.42
TraesCSU01G086500.1	Wheat	mitochondrion, plastid	44.29	17.42
TraesCSU01G123400.1	Wheat	mitochondrion	44.29	17.42
AT5G60340.1	Thale cress	mitochondrion	41.43	16.29
OQU88892	Sorghum	plastid	47.14	13.98
HORVU6Hr1G013200.1	Barley	mitochondrion	44.29	10.4
CDY31552	Canola	plastid	50.0	8.47
CDX80174	Canola	plastid	50.0	8.43
KRH34487	Soybean	cytosol	10.0	5.47
KRG92307	Soybean	cytosol	7.14	3.97

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00730+2.7.4.3	Gene3D:3.40.50.300	MapMan:35.2	InterPro:Adenyl_kinase_AK6	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004017	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0046939	GO:GO:0046940	UniProt:M1AEV5	InterPro:P-loop_NTPase	PFAM:PF13238	EnsemblPlantsGene:PGSC0003DMG400008253
PGSC:PGSC0003DMG400008253	EnsemblPlants:PGSC0003DMT400021286	PANTHER:PTHR12595	PANTHER:PTHR12595:SF0	SUPFAM:SSF52540	UniParc:UPI000296F898
SEG:seg	:	:	:	:	:

Description

Adenylate kinase isoenzyme 6 [Source:PGSC_GENE;Acc:PGSC0003DMG400008253]

Coordinates

chr10:+:43725684..43725985

Molecular Weight (calculated)

7887.2 Da

IEP (calculated)

4.629

GRAVY (calculated)

-0.644

Length

70 amino acids

Sequence
(BLAST)

1: MTQNSSCRKR PNILITGTPG TGKTTTAASM AVVSELRHIN VGDFANEENL TNDWDDTFDC YYRNEELKML

Best Arabidopsis Sequence Match ( AT5G60340.1 )
(BLAST)

001: MARRNRGVTR RERPNLLITG TPGTGKSTTA SALAEATNLR YICIGDLVKE KEFYHGWDNE LECHFINEDS VIDELDDAMI EGGNIVDYHG CDFFPQRWFD
101: RVVVLRTENS VLYDRLTNRG YSGTKLSNNL QCEMYQVLLE EAHDSYDEEI VTELQSNTIE DISNNVSTLT DWINAWQP

Arabidopsis Description

AAK6Adenylate kinase isoenzyme 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FJI1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.